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ON529857.1__USN15243.1__KIKIMORA_00970__00096

Bact-Vir

ON529857.1__USN15243.1__KIKIMORA_00970__00096

Identity

Accession:
ON529857 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Kikimoravirus› Brevundimonas_phage_vB_BpoS-Kikimora

TaxID: 2948601

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 36-106
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.81 71.0 5.72e-01 97.2% 69.2%
4n06A02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.77 69.0 4.61e-01 100.0% 63.3%
8d3mA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.74 65.0 4.50e-01 100.0% 64.2%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.73 64.0 4.49e-01 100.0% 61.8%
7t7kA01 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.73 63.0 5.41e-01 100.0% 100.0%
1h6gA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.72 60.0 5.10e-01 95.8% 82.3%
2wb7A03 1.20.120.870 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain 0.72 61.0 4.95e-01 95.8% 66.2%
3b8mC02 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 51.0 4.48e-01 74.6% 62.5%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.71 60.0 6.01e-01 97.2% 93.2%
2oezA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.68 61.0 4.62e-01 100.0% 76.7%
1a5tA03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.68 55.0 4.74e-01 91.5% 69.8%
2j0wA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.67 57.0 5.25e-01 97.2% 82.8%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 45.0 4.46e-01 70.4% 73.0%
2fgeA04 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.66 48.0 3.37e-01 80.3% 30.4%
3p42A02 6.10.250.2280 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 47.0 4.79e-01 100.0% 80.0%
7nafR01 1.10.1200.240 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.64 43.0 4.82e-01 94.4% 100.0%
1n5uA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.63 50.0 4.75e-01 93.0% 80.0%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.62 42.0 3.69e-01 71.8% 46.9%
2of5H00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.56 47.0 4.27e-01 97.2% 88.0%
1wy9A00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 42.0 3.73e-01 88.7% 86.5%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928071 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.77 69.0 4.46e-01 100.0% 35.5%
3905181 632.11.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.76 67.0 5.36e-01 98.6% 56.4%
3651783 605.4.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.76 64.0 5.85e-01 94.4% 83.0%
3845070 632.11.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.75 65.0 5.84e-01 97.2% 78.0%
2985803 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.74 65.0 4.16e-01 100.0% 44.5%
3864432 632.11.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.73 65.0 5.98e-01 97.2% 85.6%
3261105 632.11.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.71 62.0 5.69e-01 100.0% 83.2%
4076307 3352.1.1.2 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 0.71 61.0 3.72e-01 97.2% 19.1%
4297295 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.70 57.0 5.67e-01 97.2% 86.7%
3527992 192.17.1.6 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 0.70 57.0 5.76e-01 88.7% 91.4%
3270186 632.1.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid 0.69 59.0 5.01e-01 97.2% 82.5%
3391575 192.17.1.6 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › CC2D1A-B_DM14 0.68 57.0 5.52e-01 93.0% 88.7%
3345319 605.4.1.15 ↗ alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › FPP 0.68 56.0 5.72e-01 97.2% 95.7%
1180303 632.19.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › RICH 0.67 55.0 5.31e-01 95.8% 100.0%
3389507 3817.1.1.1 ↗ alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 0.64 56.0 4.79e-01 100.0% 72.5%
3782787 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.64 53.0 5.28e-01 95.8% 98.7%
4091671 3684.1.1.1 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › DUF615 0.62 48.0 4.65e-01 87.3% 75.9%
3173289 192.29.1.104 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4149 0.57 47.0 3.76e-01 97.2% 66.3%