←Back to structures

ON529857.1__USN15257.1__KIKIMORA_01110__00110

Bact-Vir

ON529857.1__USN15257.1__KIKIMORA_01110__00110

Identity

Accession:
ON529857 ↗
Kingdom:
phage

Quality

62.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Kikimoravirus› Brevundimonas_phage_vB_BpoS-Kikimora

TaxID: 2948601

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 75-155
PDB
Domain cluster: rep: OR260089.1__WNV48067.1__GB2A_gp035__00035__D64-140
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.79 62.0 6.72e-01 96.3% 100.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.78 62.0 6.61e-01 91.4% 97.2%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.77 64.0 6.82e-01 93.8% 100.0%
1vw4502 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.72 61.0 5.86e-01 96.3% 80.4%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.71 61.0 5.41e-01 98.8% 65.8%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.70 59.0 6.17e-01 95.1% 100.0%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 51.0 4.64e-01 77.8% 100.0%
1tzzB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.69 52.0 4.57e-01 80.2% 100.0%
1dmlA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.68 48.0 3.32e-01 74.1% 40.8%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 61.0 5.92e-01 100.0% 91.2%
4ibnA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.65 50.0 3.78e-01 82.7% 84.6%
5ysnB02 3.40.50.11240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ethanolamine ammonia-lyase light chain (EutC) 0.64 55.0 4.34e-01 100.0% 61.6%
1ah5A03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.62 50.0 4.95e-01 91.4% 82.6%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.62 42.0 4.09e-01 70.4% 81.3%
1a6aB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.61 37.0 3.61e-01 76.5% 55.1%
5hc2B00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 51.0 3.46e-01 100.0% 83.3%
2r11D00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 53.0 3.58e-01 100.0% 94.8%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 51.0 4.25e-01 98.8% 83.4%
6kd0A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 48.0 3.38e-01 100.0% 91.3%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.57 49.0 4.58e-01 95.1% 84.3%
2d5lA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 43.0 3.09e-01 81.5% 97.7%
3oc4B03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 43.0 3.77e-01 92.6% 53.7%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.56 41.0 3.44e-01 81.5% 43.8%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 49.0 3.29e-01 100.0% 84.5%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 44.0 3.96e-01 92.6% 61.1%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.56 47.0 3.87e-01 96.3% 83.9%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 44.0 3.95e-01 92.6% 62.7%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 43.0 3.83e-01 92.6% 60.2%
4hesA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 43.0 3.03e-01 95.1% 25.8%
1xfdA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 41.0 2.96e-01 82.7% 97.7%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.54 45.0 3.72e-01 92.6% 84.0%
4wy5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 45.0 3.16e-01 100.0% 88.1%
4ka7A01 1.10.1370.40 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › 0.54 46.0 3.01e-01 100.0% 56.7%
2kvoA01 2.40.30.220 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 0.53 40.0 3.68e-01 79.0% 92.3%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.53 45.0 3.97e-01 95.1% 95.9%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 3.67e-01 98.8% 55.6%
2c1iA01 3.30.565.50 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.53 46.0 4.19e-01 100.0% 84.7%
1rtqA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 44.0 3.11e-01 98.8% 93.1%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.52 47.0 3.91e-01 100.0% 67.4%
4zv9A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 41.0 3.08e-01 92.6% 96.6%
3uezC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.70e-01 76.5% 84.3%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 3.47e-01 81.5% 93.0%
1rm6A03 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.51 40.0 3.37e-01 82.7% 59.8%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.51 44.0 3.73e-01 100.0% 68.1%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 39.0 3.39e-01 82.7% 92.1%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 36.0 3.59e-01 76.5% 90.8%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.51 41.0 3.56e-01 91.4% 84.6%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 36.0 3.28e-01 75.3% 71.2%
2huhA01 2.60.40.1600 Mainly Beta › Sandwich › Immunoglobulin-like › Smr-associated-like 0.50 41.0 3.53e-01 91.4% 93.4%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 44.0 3.66e-01 100.0% 58.1%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3517035 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.78 67.0 6.32e-01 91.4% 97.9%
4935879 330.10.1.1 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.77 65.0 6.27e-01 97.5% 81.1%
3438132 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.75 65.0 5.90e-01 92.6% 92.4%
3287181 330.10.1.0 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.74 63.0 6.05e-01 98.8% 81.1%
3244569 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.74 63.0 6.24e-01 91.4% 90.6%
3499841 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 65.0 6.28e-01 95.1% 85.6%
3819309 330.1.1.5 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.73 65.0 6.40e-01 95.1% 94.1%
3253472 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 62.0 6.09e-01 96.3% 87.1%
3711065 330.1.1.22 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 0.72 64.0 5.64e-01 96.3% 69.6%
5001392 330.10.1.0 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.71 66.0 5.19e-01 100.0% 66.9%
4548966 330.1.1.3 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer 0.71 64.0 5.49e-01 98.8% 89.6%
5001386 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.71 63.0 6.23e-01 97.5% 91.8%
4297447 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.71 60.0 4.99e-01 95.1% 53.6%
3928293 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 61.0 5.38e-01 95.1% 66.1%
3705943 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 62.0 5.62e-01 95.1% 78.1%
3725420 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.70 61.0 5.76e-01 95.1% 85.3%
3585861 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.70 61.0 5.05e-01 95.1% 55.7%
3593374 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 62.0 5.51e-01 98.8% 79.1%
3235699 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 60.0 5.35e-01 95.1% 78.3%
3258455 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.69 61.0 5.51e-01 96.3% 74.3%
3599949 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 58.0 5.50e-01 97.5% 78.9%
4996610 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 58.0 5.66e-01 93.8% 91.1%
4964907 330.10.1.0 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.68 60.0 5.98e-01 97.5% 91.8%
4169235 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.67 59.0 5.10e-01 95.1% 89.4%
4026006 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.67 60.0 6.05e-01 98.8% 98.8%
4096366 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 59.0 5.05e-01 96.3% 92.0%
3611209 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.66 51.0 3.72e-01 84.0% 78.2%
4330094 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.65 54.0 5.25e-01 91.4% 83.3%
3852952 330.1.1.5 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.65 53.0 5.34e-01 88.9% 100.0%
3926114 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.65 48.0 3.48e-01 80.2% 41.3%
3615430 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 55.0 5.15e-01 96.3% 92.0%
3933099 330.2.1.0 ↗ a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.64 55.0 5.48e-01 95.1% 89.4%
3931594 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.64 55.0 5.40e-01 97.5% 87.8%
4938778 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.63 56.0 3.99e-01 95.1% 40.9%
4524129 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.61 52.0 5.00e-01 95.1% 88.4%
3781073 223.2.1.29 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 0.61 45.0 3.79e-01 79.0% 59.3%
4025861 4051.1.1.1 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.61 53.0 4.21e-01 98.8% 77.6%
3838085 7503.1.1.11 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › HP1454-like_C 0.60 52.0 4.93e-01 97.5% 87.0%
3176281 896.1.1.3 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.60 44.0 4.58e-01 79.0% 82.7%
3721523 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.60 53.0 3.56e-01 100.0% 86.1%
4136826 7520.1.1.0 ↗ a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.60 49.0 4.19e-01 91.4% 79.0%
1952831 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.60 51.0 3.45e-01 100.0% 82.8%
4334514 7503.1.1.3 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.59 50.0 4.15e-01 97.5% 87.7%
5016404 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.59 51.0 5.17e-01 95.1% 98.8%
3687212 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 47.0 2.91e-01 87.7% 19.6%
3587662 330.18.1.0 ↗ a+b two layers › dsRBD-like › Anti-CRISPR protein AcrIIA6 › Anti-CRISPR protein AcrIIA6 0.58 43.0 4.20e-01 79.0% 86.7%
3206632 896.1.1.2 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.58 43.0 4.30e-01 79.0% 84.7%
3593358 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.57 49.0 3.44e-01 100.0% 86.0%
4134185 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.57 49.0 4.20e-01 98.8% 86.3%
3959629 225.1.1.0 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.57 41.0 3.74e-01 74.1% 84.8%
3270312 4051.1.1.2 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.57 49.0 3.87e-01 97.5% 71.4%
4315684 283.2.1.12 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › DUF5452 0.57 39.0 3.86e-01 72.8% 87.8%
3996695 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.57 36.0 4.21e-01 70.4% 94.5%
5065294 4051.1.1.0 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.57 49.0 3.93e-01 98.8% 74.1%
3743072 3435.1.1.2 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N 0.57 50.0 4.12e-01 97.5% 58.6%
3529047 633.23.1.4 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.57 41.0 2.94e-01 79.0% 26.6%
4017266 101.1.8.10 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 0.56 42.0 3.22e-01 80.2% 48.2%
3251350 867.1.1.1 ↗ a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coprogen_oxidas 0.56 49.0 3.32e-01 100.0% 77.8%
3601659 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.59e-01 84.0% 62.7%
5000965 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.56 47.0 4.58e-01 98.8% 85.6%
4196609 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.55 47.0 4.18e-01 97.5% 85.8%
3620578 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 41.0 3.35e-01 81.5% 66.7%
3583426 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 41.0 3.50e-01 81.5% 79.3%
4011394 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.55 42.0 3.23e-01 82.7% 49.2%
4011270 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.54 42.0 3.86e-01 82.7% 87.6%
3989857 706.2.1.0 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G 0.54 49.0 4.07e-01 100.0% 60.7%
None — 0.54 41.0 2.79e-01 84.0% 77.3%
None — 0.54 45.0 3.16e-01 100.0% 88.1%
3482965 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.54 44.0 3.86e-01 93.8% 91.5%
5050503 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 41.0 2.64e-01 84.0% 26.0%
4029709 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.53 45.0 3.97e-01 97.5% 83.2%
4935472 330.4.1.0 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain 0.53 41.0 4.33e-01 95.1% 100.0%
3788274 3692.1.1.0 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.53 45.0 3.90e-01 98.8% 83.0%
3987311 7579.1.1.27 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › AXE1 0.52 42.0 2.86e-01 90.1% 85.4%
3782121 3435.1.1.2 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-N 0.51 45.0 3.63e-01 97.5% 51.6%
5029482 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.50 36.0 3.68e-01 85.2% 78.8%