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ON529857.1__USN15336.1__KIKIMORA_01900__00189
Bact-VirON529857.1__USN15336.1__KIKIMORA_01900__00189
Identity
- Accession:
- ON529857 ↗
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Kikimoravirus›
Brevundimonas_phage_vB_BpoS-Kikimora
TaxID: 2948601
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-41_58-104
D2
high
residues 128-211
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7csxA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 40.0 | 4.26e-01 | 71.4% | 75.0% |
| 1oo0B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 41.0 | 3.99e-01 | 72.6% | 60.9% |
| 4wkrA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 40.0 | 4.25e-01 | 70.2% | 83.3% |
| 4cc9A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.81e-01 | 83.3% | 100.0% |
| 5w1eA01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 34.0 | 2.74e-01 | 70.2% | 74.3% |
| 5ajiB03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.42e-01 | 72.6% | 67.4% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577944 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 42.0 | 3.62e-01 | 70.2% | 43.0% |
| 3513417 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.63 | 50.0 | 4.21e-01 | 96.4% | 51.4% |
| 3307707 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 43.0 | 3.88e-01 | 81.0% | 50.8% |
| 3813495 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 42.0 | 3.90e-01 | 71.4% | 58.2% |
| 4014952 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 42.0 | 4.04e-01 | 83.3% | 61.0% |
| 3890048 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 43.0 | 3.40e-01 | 73.8% | 45.7% |
| 3775869 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 50.0 | 3.72e-01 | 96.4% | 35.3% |
| 3704259 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 40.0 | 3.71e-01 | 71.4% | 52.7% |
| 3332848 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 44.0 | 4.19e-01 | 78.6% | 69.0% |
| 3483366 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 40.0 | 3.71e-01 | 91.7% | 53.6% |
| 3307669 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 39.0 | 3.79e-01 | 70.2% | 60.0% |
| 3180428 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 41.0 | 3.82e-01 | 72.6% | 76.2% |
| 3784649 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 41.0 | 3.82e-01 | 73.8% | 59.0% |
| 3808522 | 387.1.5.7 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL | 0.58 | 39.0 | 4.51e-01 | 70.2% | 100.0% |
| 3649127 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 38.0 | 3.96e-01 | 83.3% | 77.3% |
| 5047540 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 42.0 | 4.12e-01 | 92.9% | 74.4% |
| 3818108 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 39.0 | 3.45e-01 | 92.9% | 48.5% |
| 4985889 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 40.0 | 4.07e-01 | 90.5% | 76.5% |
| 3463238 | 304.33.1.0 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA | 0.55 | 38.0 | 4.05e-01 | 83.3% | 85.7% |
| 3837629 | 304.11.1.9 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › MBTP1_N | 0.55 | 39.0 | 3.88e-01 | 76.2% | 71.1% |
| 4988926 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 41.0 | 4.07e-01 | 95.2% | 75.3% |
| 5027085 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.54 | 47.0 | 3.40e-01 | 100.0% | 68.5% |
| 3632109 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 40.0 | 3.75e-01 | 81.0% | 90.0% |
| 3573630 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 37.0 | 3.94e-01 | 70.2% | 85.7% |
| 3721769 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.54 | 38.0 | 3.61e-01 | 76.2% | 62.0% |
| 3480006 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 41.0 | 3.66e-01 | 92.9% | 56.0% |
| 3464770 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.53 | 43.0 | 3.00e-01 | 91.7% | 86.7% |
| 3482012 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 36.0 | 3.76e-01 | 72.6% | 80.0% |
| 4026996 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 39.0 | 3.62e-01 | 83.3% | 77.4% |
| 3379009 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 39.0 | 3.46e-01 | 82.1% | 75.2% |
| 4588934 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.50 | 39.0 | 2.71e-01 | 83.3% | 29.0% |
| 4656937 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.50 | 41.0 | 3.55e-01 | 91.7% | 62.2% |