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ON529857.1__USN15424.1__KIKIMORA_02780__00277

Bact-Vir

ON529857.1__USN15424.1__KIKIMORA_02780__00277

Identity

Accession:
ON529857 ↗
Kingdom:
phage

Quality

60.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Kikimoravirus› Brevundimonas_phage_vB_BpoS-Kikimora

TaxID: 2948601

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 144-265
PDB
Domain cluster: rep: SRR1747018_scaffold_2_1202_curated_prodigal-single.1__X__X__00059__D195-308
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26926.1 best Phage_T4_rIIB 50.5 2.30e-13 85.2% 18.6%
D2 medium residues 12-110
PDB
Domain cluster: rep: rifoxyd1_full_scaffold_5_prodigal-single.1__X__X__00496__D4-100
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gu4A01 2.10.25.20 Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 0.54 26.0 3.33e-01 74.7% 95.3%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 35.0 3.15e-01 83.8% 48.6%
3uqcD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 36.0 3.21e-01 75.8% 86.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3495969 919.1.1.0 ↗ few secondary structure elements › Ribosomal protein L36 › Ribosomal protein L36 › Ribosomal protein L36 0.53 17.0 2.53e-01 87.9% 51.2%
3507677 101.35.1.25 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26215 0.53 27.0 2.82e-01 70.7% 50.5%
D3 medium residues 355-414
PDB