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ON529857.1__USN15581.1__KIKIMORA_04630__00434
Bact-VirON529857.1__USN15581.1__KIKIMORA_04630__00434
Identity
- Accession:
- ON529857 ↗
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Jeanschmidtviridae›
Kikimoravirus›
Brevundimonas_phage_vB_BpoS-Kikimora
TaxID: 2948601
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-95
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 49.0 | 5.24e-01 | 100.0% | 69.1% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 54.0 | 6.00e-01 | 100.0% | 85.5% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 53.0 | 5.29e-01 | 100.0% | 66.3% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 47.0 | 5.37e-01 | 100.0% | 82.1% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.61 | 55.0 | 5.13e-01 | 100.0% | 80.0% |
| 2cmgA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.61 | 38.0 | 4.36e-01 | 93.5% | 94.1% |
| 1inlC02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.59 | 37.0 | 4.00e-01 | 90.9% | 76.6% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.58 | 36.0 | 4.06e-01 | 90.9% | 85.7% |
| 1x6mC00 | 3.90.1590.10 | Alpha Beta › Alpha-Beta Complex › glutathione-dependent formaldehyde- activating enzyme (gfa) › glutathione-dependent formaldehyde- activating enzyme (gfa) | 0.55 | 47.0 | 3.65e-01 | 100.0% | 58.8% |
| 1uirA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.55 | 34.0 | 3.85e-01 | 97.4% | 92.3% |
| 3o4fC01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.54 | 34.0 | 3.81e-01 | 96.1% | 94.1% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 42.0 | 3.79e-01 | 97.4% | 60.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 4.04e-01 | 100.0% | 84.7% |
| 2w1zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 47.0 | 3.87e-01 | 100.0% | 68.8% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 48.0 | 4.09e-01 | 100.0% | 66.9% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.52 | 41.0 | 3.19e-01 | 90.9% | 70.6% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.52 | 33.0 | 3.62e-01 | 96.1% | 87.5% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 43.0 | 3.19e-01 | 94.8% | 40.9% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.51 | 39.0 | 2.99e-01 | 87.0% | 90.2% |
| 5g47A01 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 3.77e-01 | 83.1% | 94.0% |
| 1iy9A02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.50 | 32.0 | 3.54e-01 | 96.1% | 94.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3570369 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.81 | 53.0 | 4.97e-01 | 100.0% | 56.7% |
| 3394215 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.81 | 54.0 | 4.90e-01 | 100.0% | 53.0% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 53.0 | 5.53e-01 | 100.0% | 82.9% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.72 | 48.0 | 4.33e-01 | 100.0% | 50.5% |
| 3580428 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 5.02e-01 | 92.2% | 93.3% |
| 3177842 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.62 | 54.0 | 4.57e-01 | 100.0% | 59.2% |
| 573 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.61 | 55.0 | 5.13e-01 | 100.0% | 80.0% |
| 4229837 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.60 | 54.0 | 4.03e-01 | 100.0% | 41.1% |
| 3873627 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.60 | 54.0 | 4.68e-01 | 100.0% | 66.1% |
| 3621303 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 4.18e-01 | 100.0% | 53.8% |
| 3973362 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.60 | 38.0 | 3.82e-01 | 94.8% | 62.5% |
| 4243071 | 3699.1.1.0 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain | 0.59 | 37.0 | 4.21e-01 | 97.4% | 89.1% |
| 4076873 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.57 | 35.0 | 3.96e-01 | 93.5% | 85.5% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 51.0 | 5.05e-01 | 100.0% | 92.5% |
| 3501834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 47.0 | 4.61e-01 | 98.7% | 81.2% |
| 4971071 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.56 | 35.0 | 3.91e-01 | 94.8% | 87.3% |
| 2897014 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.56 | 35.0 | 3.87e-01 | 96.1% | 81.7% |
| 4336845 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.55 | 35.0 | 3.78e-01 | 96.1% | 81.7% |
| 4039507 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.54 | 34.0 | 3.86e-01 | 97.4% | 90.9% |
| 4114201 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.53 | 33.0 | 3.57e-01 | 96.1% | 75.4% |
| 4039571 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.53 | 33.0 | 3.75e-01 | 97.4% | 89.1% |