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ON529859.1__USN15730.1__BABAJAGA_00900__00090
Bact-VirON529859.1__USN15730.1__BABAJAGA_00900__00090
Identity
- Accession:
- ON529859 ↗
- Kingdom:
- phage
Quality
53.2
mean pLDDT
Taxonomy
TaxID: 2948593
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 154-197
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zuoA09 | 2.30.30.570 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 52.0 | 4.61e-01 | 70.5% | 49.2% |
| 2qyzA01 | 3.30.1490.160 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ctc02137 like domains | 0.74 | 33.0 | 3.09e-01 | 77.3% | 34.0% |
| 2zuoA08 | 2.30.30.620 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 47.0 | 4.41e-01 | 79.5% | 55.2% |
| 4tpuA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 46.0 | 4.89e-01 | 75.0% | 97.3% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.64 | 53.0 | 4.79e-01 | 100.0% | 75.8% |
| 4fmrB01 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.63 | 43.0 | 3.09e-01 | 75.0% | 40.9% |
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.59 | 40.0 | 3.16e-01 | 72.7% | 48.5% |
| 2xy1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.22e-01 | 75.0% | 58.8% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.58 | 44.0 | 4.18e-01 | 95.5% | 75.4% |
| 1a9xB02 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.57 | 40.0 | 2.56e-01 | 75.0% | 90.4% |
| 1adnA00 | 3.40.10.10 | Alpha Beta › 3-Layer(aba) Sandwich › DNA Methylphosphotriester Repair Domain › DNA Methylphosphotriester Repair Domain | 0.56 | 41.0 | 3.40e-01 | 86.4% | 45.7% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.55 | 40.0 | 3.37e-01 | 81.8% | 72.6% |
| 8b0qA01 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.55 | 46.0 | 3.15e-01 | 100.0% | 91.5% |
| 2y2mA03 | 3.40.50.12800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 43.0 | 3.69e-01 | 86.4% | 89.7% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 43.0 | 3.92e-01 | 88.6% | 81.4% |
| 3doaA03 | 3.40.970.40 | Alpha Beta › 3-Layer(aba) Sandwich › Ribonuclease HI; Chain A › fibrinogen binding protein from staphylococcus aureus domain like | 0.53 | 39.0 | 3.96e-01 | 93.2% | 97.7% |
| 4zyaB00 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.53 | 44.0 | 3.68e-01 | 93.2% | 90.8% |
| 4nu0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.83e-01 | 95.5% | 77.8% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.52 | 35.0 | 2.92e-01 | 72.7% | 51.6% |
| 3pquA01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 34.0 | 2.64e-01 | 70.5% | 98.3% |
| 8be0A01 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.50 | 41.0 | 2.72e-01 | 93.2% | 30.9% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3868570 | 3529.1.1.3 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault_3 | 0.80 | 55.0 | 4.19e-01 | 72.7% | 32.0% |
| 4155583 | 3529.1.1.3 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault_3 | 0.80 | 55.0 | 4.97e-01 | 72.7% | 53.3% |
| 3698836 | 3529.1.1.3 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault_3 | 0.80 | 55.0 | 4.69e-01 | 72.7% | 45.7% |
| 3595911 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.79 | 55.0 | 4.68e-01 | 72.7% | 45.7% |
| 3593796 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.79 | 54.0 | 4.75e-01 | 72.7% | 49.2% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 52.0 | 5.19e-01 | 70.5% | 91.1% |
| 4960524 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 56.0 | 5.61e-01 | 81.8% | 97.8% |
| 3610326 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.73 | 49.0 | 5.04e-01 | 70.5% | 77.5% |
| 3600630 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.72 | 50.0 | 4.25e-01 | 75.0% | 44.0% |
| 3265984 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.71 | 48.0 | 5.00e-01 | 70.5% | 77.5% |
| 3595896 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.69 | 46.0 | 4.67e-01 | 70.5% | 68.9% |
| 4613768 | 7533.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › PGK | 0.66 | 51.0 | 3.27e-01 | 86.4% | 27.6% |
| 5013997 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 44.0 | 4.44e-01 | 75.0% | 80.0% |
| 5059159 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.62 | 50.0 | 3.83e-01 | 100.0% | 37.2% |
| 4967717 | 375.1.1.181 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PALP | 0.62 | 43.0 | 4.65e-01 | 75.0% | 100.0% |
| 3463682 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 41.0 | 3.33e-01 | 75.0% | 66.3% |
| 3253644 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.60 | 46.0 | 3.78e-01 | 100.0% | 43.0% |
| 4326569 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.59 | 38.0 | 3.35e-01 | 86.4% | 44.6% |
| 4277854 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.59 | 49.0 | 3.21e-01 | 90.9% | 57.3% |
| 4432935 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.58 | 37.0 | 3.28e-01 | 88.6% | 44.6% |
| 3924201 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.57 | 35.0 | 3.10e-01 | 86.4% | 43.8% |
| 3321292 | 11.1.1.902 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N | 0.56 | 38.0 | 3.01e-01 | 75.0% | 41.8% |
| 3393166 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.56 | 36.0 | 3.20e-01 | 88.6% | 44.6% |
| 5038202 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.55 | 46.0 | 3.35e-01 | 93.2% | 37.1% |
| 3308035 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.55 | 37.0 | 2.80e-01 | 75.0% | 41.4% |
| 3976549 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.54 | 42.0 | 2.85e-01 | 93.2% | 20.0% |
| 4675823 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.54 | 41.0 | 3.81e-01 | 93.2% | 63.1% |
| 3995853 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 37.0 | 2.26e-01 | 79.5% | 10.0% |
| 4007998 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.54 | 41.0 | 2.79e-01 | 93.2% | 20.0% |
| 3987431 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 39.0 | 2.32e-01 | 90.9% | 38.3% |
| 4074154 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.53 | 40.0 | 4.02e-01 | 86.4% | 86.7% |
| 4442768 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.53 | 34.0 | 3.14e-01 | 75.0% | 44.6% |
| 3187671 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 35.0 | 3.31e-01 | 72.7% | 88.3% |
| 3508549 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.52 | 34.0 | 3.40e-01 | 75.0% | 64.4% |