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ON529860.1__USN15974.1__PAPPERLAPAPP_02330__00217
Bact-VirON529860.1__USN15974.1__PAPPERLAPAPP_02330__00217
Identity
- Accession:
- ON529860 ↗
- Kingdom:
- phage
Quality
67.1
mean pLDDT
Taxonomy
TaxID: 2948605
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-130
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3i9v700 | 3.30.920.80 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 | 0.64 | 47.0 | 4.03e-01 | 75.6% | 76.4% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 43.0 | 3.62e-01 | 75.6% | 75.7% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.60 | 43.0 | 3.17e-01 | 75.6% | 39.8% |
| 2o3iA02 | 2.40.390.10 | Mainly Beta › Beta Barrel › CV3147-like › CV3147-like | 0.57 | 46.0 | 4.05e-01 | 100.0% | 57.3% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 36.0 | 3.27e-01 | 96.3% | 48.6% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 44.0 | 2.94e-01 | 86.6% | 95.4% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.57 | 41.0 | 2.73e-01 | 75.6% | 59.8% |
| 1orvA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.56 | 38.0 | 2.40e-01 | 70.7% | 20.4% |
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 3.00e-01 | 75.6% | 55.3% |
| 4rnyA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 44.0 | 3.63e-01 | 85.4% | 86.4% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.55 | 40.0 | 4.13e-01 | 85.4% | 81.0% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 42.0 | 3.26e-01 | 85.4% | 44.0% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 40.0 | 3.80e-01 | 79.3% | 70.4% |
| 1uhtA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.54 | 40.0 | 3.54e-01 | 78.0% | 83.1% |
| 1i0zA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.53 | 47.0 | 3.75e-01 | 98.8% | 85.7% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 42.0 | 4.00e-01 | 90.2% | 79.8% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 37.0 | 2.99e-01 | 75.6% | 49.4% |
| 1sovA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.52 | 47.0 | 3.67e-01 | 100.0% | 83.7% |
| 1ez4A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.52 | 45.0 | 3.65e-01 | 98.8% | 85.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 29.0 | 2.87e-01 | 84.1% | 49.5% |
| 2jh3A03 | 3.30.1360.190 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.51 | 37.0 | 3.42e-01 | 78.0% | 89.3% |
| 1o6zA01 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 45.0 | 3.67e-01 | 100.0% | 83.9% |
| 2i6tA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 45.0 | 3.72e-01 | 100.0% | 83.6% |
| 2d4aA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 44.0 | 3.59e-01 | 97.6% | 85.0% |
| 3w4sA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 38.0 | 2.68e-01 | 80.5% | 70.7% |
| 3etvA02 | 1.20.58.2230 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Retrograde transport protein Dsl1, N-terminal domain | 0.51 | 44.0 | 3.25e-01 | 100.0% | 35.1% |
| 1f7uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 44.0 | 2.92e-01 | 98.8% | 23.9% |
| 2ph7A01 | 1.10.3400.10 | Mainly Alpha › Orthogonal Bundle › af_2093 domain like fold › af_2093 domain like | 0.50 | 45.0 | 3.91e-01 | 100.0% | 71.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5005555 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.61 | 43.0 | 2.99e-01 | 75.6% | 66.7% |
| 4997789 | 241.9.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 | 0.61 | 44.0 | 4.08e-01 | 75.6% | 72.1% |
| 4389597 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.60 | 42.0 | 4.16e-01 | 74.4% | 82.2% |
| 3932473 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 44.0 | 2.84e-01 | 78.0% | 55.4% |
| 3245811 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.58 | 45.0 | 3.56e-01 | 82.9% | 60.0% |
| 3614726 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.58 | 36.0 | 3.20e-01 | 79.3% | 42.5% |
| 3973141 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.58 | 40.0 | 3.87e-01 | 70.7% | 75.6% |
| 3879372 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.58 | 37.0 | 3.89e-01 | 84.1% | 72.0% |
| 4336238 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.56 | 41.0 | 3.87e-01 | 78.0% | 77.0% |
| 3866573 | 12.3.1.42 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 | 0.55 | 41.0 | 2.83e-01 | 79.3% | 90.5% |
| 3548529 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 41.0 | 2.81e-01 | 82.9% | 87.1% |
| 4008196 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.53 | 41.0 | 3.64e-01 | 87.8% | 85.4% |
| 3739664 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.53 | 36.0 | 3.84e-01 | 75.6% | 82.9% |
| 4031368 | 3264.1.1.0 ↗ | 0.52 | 38.0 | 3.20e-01 | 78.0% | 78.6% | |
| None | — | 0.52 | 37.0 | 2.76e-01 | 74.4% | 70.0% | |
| 3226646 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.52 | 39.0 | 3.94e-01 | 78.0% | 88.7% |
| 3992786 | 11.1.1.1176 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-prop_Rol-3 | 0.52 | 35.0 | 2.49e-01 | 72.0% | 33.1% |
| 3794885 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.51 | 38.0 | 3.68e-01 | 76.8% | 77.8% |
| 3652146 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.51 | 36.0 | 2.77e-01 | 73.2% | 40.5% |