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ON529860.1__USN16001.1__PAPPERLAPAPP_02600__00244

Bact-Vir

ON529860.1__USN16001.1__PAPPERLAPAPP_02600__00244

Identity

Accession:
ON529860 ↗
Kingdom:
phage

Quality

76.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Brevundimonas_phage_vB_BpoS-Papperlapapp

TaxID: 2948605

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-56
PDB
Domain cluster: representative
CATH (80)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 59.0 5.76e-01 72.0% 63.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 63.0 5.31e-01 76.0% 48.8%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 63.0 5.73e-01 76.0% 60.9%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 59.0 5.38e-01 74.0% 54.5%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 64.0 5.85e-01 78.0% 63.5%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 58.0 6.13e-01 74.0% 80.0%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 62.0 4.79e-01 78.0% 39.0%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 59.0 5.38e-01 78.0% 56.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 61.0 5.95e-01 76.0% 70.4%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 61.0 5.66e-01 76.0% 63.9%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 60.0 5.65e-01 76.0% 63.3%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.83 59.0 4.33e-01 76.0% 30.2%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 62.0 5.65e-01 80.0% 63.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.67e-01 82.0% 67.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 61.0 5.91e-01 82.0% 75.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 6.21e-01 88.0% 75.9%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.80 57.0 4.07e-01 76.0% 26.8%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 58.0 4.69e-01 78.0% 42.6%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 6.18e-01 88.0% 79.3%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 5.36e-01 86.0% 57.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 6.07e-01 86.0% 82.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.57e-01 88.0% 61.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 64.0 4.17e-01 88.0% 21.8%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 54.0 5.80e-01 72.0% 87.8%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 6.18e-01 96.0% 79.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.50e-01 88.0% 62.5%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.48e-01 88.0% 65.7%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.55e-01 96.0% 59.8%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.76 51.0 3.57e-01 70.0% 22.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 5.62e-01 88.0% 71.4%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 57.0 4.81e-01 84.0% 50.6%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 53.0 5.54e-01 78.0% 86.4%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 4.89e-01 82.0% 57.9%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 53.0 3.34e-01 78.0% 15.6%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.73 58.0 4.29e-01 88.0% 36.6%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.72 47.0 4.40e-01 74.0% 52.3%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.90e-01 92.0% 66.3%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.02e-01 96.0% 61.4%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 57.0 5.14e-01 96.0% 62.9%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.41e-01 82.0% 43.6%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.49e-01 98.0% 74.6%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.44e-01 86.0% 85.2%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.68e-01 88.0% 94.0%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 48.0 4.46e-01 72.0% 61.5%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.63e-01 98.0% 82.3%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.16e-01 98.0% 63.1%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.96e-01 96.0% 56.8%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.10e-01 98.0% 57.6%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 5.68e-01 94.0% 92.7%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.28e-01 98.0% 74.0%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.42e-01 94.0% 77.0%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 4.98e-01 98.0% 55.1%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.45e-01 96.0% 88.9%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.33e-01 98.0% 39.1%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.38e-01 98.0% 41.1%
3oioA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 58.0 4.51e-01 96.0% 46.4%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.30e-01 100.0% 76.4%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.68 57.0 3.79e-01 98.0% 22.9%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.68 49.0 5.21e-01 90.0% 97.6%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 57.0 4.55e-01 98.0% 49.5%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 4.37e-01 94.0% 45.4%
3oouA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 5.39e-01 94.0% 90.9%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 4.85e-01 98.0% 64.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 4.23e-01 100.0% 35.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.13e-01 100.0% 73.1%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.08e-01 96.0% 70.8%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.21e-01 88.0% 88.5%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 53.0 4.31e-01 94.0% 45.2%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.31e-01 98.0% 89.7%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.43e-01 94.0% 65.6%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 5.02e-01 100.0% 72.5%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 5.04e-01 90.0% 77.6%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.21e-01 98.0% 86.5%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.64e-01 98.0% 60.5%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 43.0 3.70e-01 74.0% 42.5%
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 48.0 3.83e-01 96.0% 47.1%
1x4qA01 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.55 40.0 3.73e-01 86.0% 59.2%
1di1A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 45.0 2.89e-01 96.0% 47.6%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.53 45.0 3.11e-01 100.0% 52.7%
3w6zA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.50 41.0 3.24e-01 98.0% 80.2%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5074438 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.93 67.0 7.41e-01 78.0% 95.0%
5070906 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 65.0 6.08e-01 76.0% 63.3%
4148347 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.90 65.0 4.95e-01 76.0% 36.5%
5070618 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.89 64.0 6.45e-01 76.0% 76.0%
4967134 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.89 60.0 6.95e-01 72.0% 100.0%
3288090 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 64.0 5.61e-01 76.0% 55.7%
4971448 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.88 65.0 5.59e-01 80.0% 52.0%
5074940 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.87 77.0 7.53e-01 100.0% 89.1%
5062514 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.87 67.0 7.00e-01 88.0% 91.1%
3959252 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 63.0 5.90e-01 76.0% 63.3%
3281471 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 63.0 5.28e-01 76.0% 47.5%
5078207 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 63.0 6.18e-01 82.0% 72.2%
4970237 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.86 65.0 6.80e-01 84.0% 88.9%
2464007 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 62.0 5.60e-01 76.0% 59.1%
3279339 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.86 62.0 4.09e-01 76.0% 21.1%
3640035 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 61.0 5.07e-01 78.0% 44.7%
4992849 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.86 63.0 5.30e-01 82.0% 48.8%
5052578 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.85 63.0 6.91e-01 88.0% 100.0%
4992527 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.85 62.0 5.27e-01 80.0% 48.8%
5030797 101.1.11.2 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 0.85 62.0 5.04e-01 82.0% 43.3%
3588551 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 59.0 5.58e-01 76.0% 61.7%
3973615 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.85 61.0 5.55e-01 76.0% 58.5%
4304581 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.84 62.0 4.93e-01 78.0% 43.6%
4989022 101.1.2.881 ↗ alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.84 65.0 6.85e-01 96.0% 93.3%
5074939 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 76.0 7.36e-01 100.0% 90.9%
5051778 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 56.0 6.44e-01 70.0% 100.0%
5050961 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 62.0 6.81e-01 88.0% 100.0%
4350602 101.1.8.14 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.83 63.0 5.80e-01 90.0% 63.1%
4998155 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 65.0 6.59e-01 94.0% 86.0%
1546121 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 60.0 5.16e-01 78.0% 50.7%
4965520 101.1.1.556 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF7317 0.83 66.0 6.40e-01 96.0% 78.2%
5079108 101.1.1.60 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 58.0 4.66e-01 74.0% 45.3%
5028174 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.83 68.0 6.58e-01 100.0% 81.8%
4993165 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.82 66.0 5.24e-01 96.0% 45.3%
3973709 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 61.0 4.74e-01 80.0% 39.0%
4479119 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.82 59.0 5.77e-01 78.0% 70.9%
5014241 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.81 65.0 5.44e-01 96.0% 51.8%
5019932 3151.1.1.0 ↗ alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 0.81 54.0 6.08e-01 70.0% 100.0%
4992556 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.81 69.0 5.33e-01 100.0% 44.8%
4987329 101.1.2.881 ↗ alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.81 65.0 5.43e-01 98.0% 51.8%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 61.0 5.24e-01 80.0% 53.3%
3502245 101.1.6.13 ↗ alpha arrays › HTH › HTH › TrpR › HTH_28 0.80 57.0 5.92e-01 78.0% 84.4%
4295835 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 61.0 6.32e-01 96.0% 91.1%
4530329 101.1.8.14 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.80 60.0 5.71e-01 88.0% 68.3%
4314061 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 65.0 5.20e-01 88.0% 48.4%
4950777 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.79 63.0 5.64e-01 96.0% 62.9%
142817 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 64.0 5.64e-01 88.0% 63.9%
3288310 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 64.0 5.68e-01 88.0% 65.7%
5045749 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.79 65.0 5.96e-01 100.0% 69.2%
3944331 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 64.0 5.42e-01 88.0% 56.2%
5045632 101.1.2.881 ↗ alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.79 67.0 6.77e-01 96.0% 94.0%
3962552 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.79 63.0 5.51e-01 88.0% 61.3%
4090141 101.1.1.494 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.79 56.0 5.31e-01 76.0% 63.3%
4008641 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 58.0 4.87e-01 80.0% 47.1%
3985435 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 57.0 6.11e-01 88.0% 100.0%
5072203 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 66.0 6.70e-01 100.0% 98.0%
5064868 101.1.11.203 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.78 66.0 5.44e-01 98.0% 52.2%
4937998 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 60.0 6.25e-01 100.0% 95.6%
5039245 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.34e-01 92.0% 90.0%
3968151 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 62.0 5.14e-01 88.0% 52.9%
3616846 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 66.0 6.25e-01 96.0% 81.7%
5052142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 60.0 6.28e-01 94.0% 97.8%
3984815 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.76 63.0 6.18e-01 94.0% 85.5%
3998880 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 55.0 4.53e-01 84.0% 43.2%
4997129 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 56.0 5.69e-01 84.0% 84.0%
3942713 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 61.0 6.17e-01 94.0% 98.0%
3980379 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 56.0 4.43e-01 88.0% 40.4%
4989901 7592.1.1.2 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Cas_APE2256 0.72 51.0 3.30e-01 76.0% 21.3%
3424045 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 60.0 5.90e-01 96.0% 90.9%
4927516 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 5.46e-01 94.0% 75.0%
5053441 101.1.1.371 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.71 65.0 6.07e-01 100.0% 83.3%
3991300 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.11e-01 94.0% 58.7%
5059633 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.71 61.0 5.93e-01 98.0% 96.4%
4540842 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 58.0 4.02e-01 94.0% 29.4%
3645591 101.1.1.362 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RF-1 0.70 58.0 4.82e-01 94.0% 53.3%
3941568 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.71e-01 94.0% 92.7%
3590374 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.68 56.0 5.50e-01 94.0% 90.9%
3588540 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.68 55.0 5.43e-01 94.0% 90.9%
3979732 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 56.0 5.16e-01 94.0% 76.9%
3979084 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 54.0 5.41e-01 94.0% 98.0%
3277668 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.66 54.0 5.29e-01 94.0% 92.7%
4216701 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 51.0 5.20e-01 94.0% 96.0%
3288983 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.64 53.0 5.03e-01 94.0% 81.7%
4368209 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.64 53.0 5.33e-01 94.0% 98.0%
3973662 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 53.0 4.35e-01 100.0% 89.0%
4323843 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.63 49.0 4.98e-01 90.0% 94.0%
3946233 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 52.0 5.05e-01 94.0% 94.5%
D2 medium residues 121-209
PDB
Domain cluster: rep: MK493321.1__QBQ74908.1__RW110999_028__00023__D22-112
D3 medium residues 299-404
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ikhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 42.0 3.08e-01 75.5% 97.9%
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.55 30.0 3.21e-01 78.3% 59.4%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.52 31.0 3.54e-01 73.6% 78.5%
3geeA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.52 37.0 3.22e-01 75.5% 70.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3958461 191.1.1.15 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_11 0.61 33.0 3.91e-01 72.6% 76.0%
4948421 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.53 38.0 3.74e-01 74.5% 100.0%
3744257 2.1.1.228 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind 0.53 34.0 3.78e-01 70.8% 85.0%
3310401 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.52 37.0 2.85e-01 75.5% 77.7%
4944899 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 32.0 3.45e-01 79.2% 74.1%
3245716 524.1.1.1 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.51 36.0 3.16e-01 71.7% 57.5%
4434880 578.1.1.1 ↗ alpha arrays › YcfC-like › YcfC-like › YcfC-like › DUF489 0.51 38.0 2.95e-01 79.2% 36.1%
3454922 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.51 36.0 3.85e-01 89.6% 86.7%
5082892 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.51 38.0 3.24e-01 78.3% 88.2%