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ON529865.1__UTC29941.1__STASHLEY_00070__00008

Bact-Vir

ON529865.1__UTC29941.1__STASHLEY_00070__00008

Identity

Accession:
ON529865 ↗
Kingdom:
phage

Quality

89.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 21-144_238-249
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13353.12 best Fer4_12 26.9 7.60e-06 85.3% 58.4%
PF04055.28 Radical_SAM 36.6 7.10e-09 75.0% 56.0%
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4njhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.84 74.0 6.24e-01 91.2% 84.2%
3c8fA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.82 76.0 6.07e-01 97.1% 86.9%
5v1qB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.77 61.0 4.64e-01 81.6% 92.3%
2a5hA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 63.0 4.83e-01 96.3% 79.4%
3vthA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 50.0 4.00e-01 77.9% 100.0%
3u31A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.65 50.0 4.69e-01 80.9% 84.1%
3pkiA01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.64 52.0 4.58e-01 86.8% 94.6%
1yc5A01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.63 48.0 4.72e-01 80.9% 91.3%
3cvjC00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 48.0 3.96e-01 80.9% 71.0%
2b4yA01 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.62 47.0 4.59e-01 79.4% 88.8%
1atzB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.62 48.0 4.30e-01 81.6% 86.2%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 47.0 4.41e-01 80.9% 75.5%
3bg3A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 49.0 3.66e-01 86.8% 36.1%
2r6oA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.61 47.0 3.85e-01 83.1% 62.4%
2q09A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 51.0 3.88e-01 89.0% 59.9%
1nriA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 47.0 3.84e-01 82.4% 59.7%
3mu7A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 52.0 4.04e-01 91.2% 67.8%
2yvaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 46.0 4.08e-01 80.1% 76.7%
3tw6B03 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 53.0 3.48e-01 94.9% 50.5%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 53.0 4.29e-01 98.5% 82.9%
3sftA00 3.40.50.180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylesterase CheB, C-terminal domain 0.58 46.0 4.15e-01 83.8% 92.1%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 3.82e-01 80.9% 63.4%
1q6oB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 44.0 3.77e-01 80.9% 73.5%
3h5lA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 4.13e-01 80.9% 77.0%
1x7fA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 46.0 3.82e-01 84.6% 78.5%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 4.01e-01 80.9% 67.2%
5fbhA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 44.0 3.94e-01 80.9% 65.8%
3gfzB02 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.57 45.0 3.70e-01 84.6% 60.2%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 44.0 3.91e-01 80.9% 69.1%
1chdA00 3.40.50.180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylesterase CheB, C-terminal domain 0.56 45.0 3.96e-01 83.8% 86.9%
3dmyA02 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.56 41.0 4.12e-01 88.2% 73.6%
3brsA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 43.0 4.38e-01 80.9% 86.6%
2f48A01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 44.0 3.49e-01 83.8% 62.5%
3u80A00 3.40.50.9100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II 0.56 41.0 4.27e-01 83.8% 81.9%
4g2nA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 43.0 3.89e-01 80.9% 95.6%
2gsdA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 43.0 3.83e-01 80.9% 91.1%
3paoB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 47.0 3.60e-01 91.9% 78.3%
1rqeA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 47.0 3.68e-01 91.2% 96.5%
6bmaA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 43.0 3.42e-01 81.6% 55.6%
4uavA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 40.0 3.82e-01 75.7% 83.2%
3l5kA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 41.0 3.92e-01 77.2% 87.9%
3gvxA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 42.0 3.87e-01 80.9% 92.7%
4jc0A03 3.30.750.200 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.55 39.0 4.13e-01 73.5% 94.2%
1hkuA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 42.0 3.74e-01 80.9% 92.8%
1bifA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 3.69e-01 81.6% 78.2%
4e5mA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 42.0 3.70e-01 80.9% 91.9%
3euaF01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 42.0 4.01e-01 80.9% 80.1%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.70e-01 80.9% 82.1%
3vylA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 47.0 3.59e-01 91.9% 75.8%
3wnvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 3.77e-01 80.9% 91.4%
4eygA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 42.0 3.98e-01 83.1% 94.0%
2amxB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 46.0 3.39e-01 91.9% 68.8%
5tx7A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 3.73e-01 80.9% 91.1%
1dxyA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 3.65e-01 80.9% 93.4%
4gx0B04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 40.0 4.08e-01 87.5% 80.9%
4yleA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 42.0 4.21e-01 83.1% 81.8%
1gr0A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 43.0 3.61e-01 88.2% 74.9%
1vhcF00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 43.0 3.70e-01 86.8% 74.2%
4bjhB02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.53 40.0 4.02e-01 80.9% 95.1%
3lp8A01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 34.0 4.00e-01 85.3% 95.7%
3r2gA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 46.0 3.50e-01 95.6% 72.1%
4c4oA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 40.0 4.08e-01 80.9% 95.4%
3jx9A00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.52 41.0 3.81e-01 82.4% 74.6%
2rjoA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 41.0 4.05e-01 85.3% 76.5%
3b5vA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 45.0 3.64e-01 91.9% 75.3%
4fb7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 45.0 3.52e-01 91.2% 70.7%
3dxiA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 45.0 3.50e-01 96.3% 84.9%
1tfrA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.51 43.0 3.80e-01 92.6% 99.0%
3ik4A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.51 45.0 3.71e-01 95.6% 78.8%
4nesA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 42.0 3.74e-01 91.2% 88.9%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4098501 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.92 89.0 7.04e-01 100.0% 80.8%
1954222 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.88 85.0 6.74e-01 99.3% 99.2%
3977266 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.88 77.0 6.37e-01 91.2% 87.3%
5010295 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.87 78.0 6.49e-01 91.2% 83.8%
4337349 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.87 77.0 6.34e-01 91.2% 85.8%
2440205 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.87 77.0 6.28e-01 91.2% 60.0%
3165412 2002.1.1.232 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Fer4_12 0.87 79.0 6.16e-01 94.1% 87.5%
4303997 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.86 77.0 6.28e-01 92.6% 81.7%
4156735 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.85 76.0 6.31e-01 92.6% 81.7%
4458545 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.85 76.0 6.25e-01 91.9% 82.3%
4279469 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.85 76.0 6.43e-01 92.6% 80.3%
4277885 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.85 76.0 6.24e-01 91.9% 79.0%
4961009 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 77.0 6.05e-01 94.1% 84.4%
4979879 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 76.0 5.80e-01 94.9% 83.5%
4970981 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 76.0 6.20e-01 94.1% 90.0%
3590188 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 80.0 6.17e-01 99.3% 82.2%
4971718 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 76.0 6.15e-01 94.9% 91.1%
4612866 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.84 74.0 6.18e-01 91.9% 83.7%
4971612 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 76.0 5.80e-01 94.9% 77.9%
5026547 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.84 73.0 5.81e-01 91.2% 81.9%
4950879 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 74.0 6.05e-01 92.6% 84.8%
4935331 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 74.0 6.00e-01 91.9% 85.2%
5001299 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 78.0 6.21e-01 97.8% 88.6%
4931191 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 73.0 5.89e-01 91.2% 83.8%
4047292 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 74.0 6.22e-01 92.6% 81.3%
4945643 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.83 74.0 5.63e-01 94.1% 72.8%
4938811 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.82 71.0 5.85e-01 89.7% 87.1%
350807 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.82 76.0 6.07e-01 97.1% 86.9%
4944164 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.81 73.0 5.51e-01 94.1% 86.8%
3955139 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.81 73.0 5.42e-01 94.1% 67.7%
4972961 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.81 68.0 5.48e-01 86.8% 85.0%
4933582 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.80 72.0 5.57e-01 94.1% 77.5%
5071385 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.80 76.0 5.87e-01 98.5% 83.4%
4932017 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.77 65.0 4.53e-01 86.8% 83.2%
4981908 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.77 64.0 4.54e-01 86.0% 89.9%
5035070 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.77 69.0 5.73e-01 93.4% 89.1%
5056289 2006.1.4.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN 0.72 53.0 4.72e-01 75.7% 93.7%
2439603 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.72 60.0 4.91e-01 86.8% 78.4%
4380787 2002.1.1.121 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C 0.70 62.0 4.60e-01 91.9% 85.8%
5044211 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 61.0 4.23e-01 92.6% 80.0%
3954200 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 62.0 4.86e-01 92.6% 83.8%
4325818 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.70 63.0 4.61e-01 95.6% 68.1%
4972142 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.70 60.0 5.01e-01 91.2% 85.3%
5043861 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.69 64.0 5.20e-01 98.5% 95.7%
5000538 2006.1.4.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN 0.68 50.0 5.09e-01 75.7% 97.7%
3235061 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.67 49.0 4.33e-01 75.0% 79.0%
3852214 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.66 48.0 4.34e-01 75.0% 84.3%
3625692 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.65 48.0 4.09e-01 75.0% 81.4%
5026715 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 57.0 4.63e-01 94.9% 96.8%
4992063 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.64 49.0 4.14e-01 80.1% 72.0%
5011082 2006.1.6.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.64 49.0 4.26e-01 79.4% 80.0%
4212754 2003.2.1.2 a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Molybdopterin,Molybdop_Fe4S4 0.63 51.0 3.65e-01 86.8% 51.7%
4303450 2003.1.4.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.63 47.0 4.12e-01 78.7% 93.2%
4600891 2003.2.1.0 a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 0.62 50.0 3.61e-01 86.8% 52.6%
4542302 2002.5.1.1 a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL 0.62 48.0 3.88e-01 82.4% 59.2%
5054010 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.61 48.0 4.22e-01 82.4% 99.0%
3727363 2002.1.1.276 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF29664 0.61 49.0 3.81e-01 83.8% 90.0%
3945580 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.60 47.0 3.55e-01 82.4% 87.4%
3784705 2003.1.4.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2 0.59 45.0 3.88e-01 79.4% 89.8%
5057771 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.59 47.0 4.20e-01 83.1% 99.5%
4158986 7548.1.1.1 a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest 0.59 46.0 4.04e-01 81.6% 89.0%
5055472 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.58 46.0 4.03e-01 82.4% 99.5%
4151265 7548.1.1.1 a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest 0.58 46.0 3.92e-01 83.8% 80.3%
4522351 7548.1.1.1 a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest 0.58 45.0 3.99e-01 83.1% 88.0%
3889408 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.57 44.0 4.07e-01 80.9% 68.6%
3315755 2002.1.1.63 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_35 0.57 46.0 3.69e-01 85.3% 86.9%
5050836 7548.1.1.1 a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest 0.57 45.0 3.98e-01 83.8% 87.0%
4181000 7579.1.1.15 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3,Lipase3_N 0.57 52.0 4.11e-01 98.5% 77.8%
3841401 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.57 44.0 3.96e-01 80.9% 68.1%
4129331 7548.1.1.1 a/b three-layered sandwiches › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › Methylesterase CheB, C-terminal domain › CheB_methylest 0.57 45.0 4.05e-01 84.6% 91.1%
3704350 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.57 44.0 4.43e-01 81.6% 97.8%
5035672 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.56 44.0 4.36e-01 80.9% 85.0%
1738174 7512.1.1.21 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › MGDG_synth 0.56 42.0 4.27e-01 82.4% 76.8%
4666952 2007.1.18.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) 0.56 45.0 3.54e-01 84.6% 50.0%
3881245 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.56 43.0 3.88e-01 80.9% 64.2%
1575356 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.56 41.0 4.54e-01 83.8% 93.7%
3970864 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.56 47.0 4.21e-01 89.7% 84.7%
4422980 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.56 43.0 3.93e-01 80.9% 70.6%
4983495 2002.1.1.236 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.56 43.0 4.01e-01 80.9% 82.9%
4418829 7512.1.1.31 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 0.56 44.0 3.94e-01 83.1% 86.3%
3878911 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.56 46.0 4.23e-01 88.2% 83.4%
4586346 2003.1.1.48 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N 0.55 42.0 3.62e-01 81.6% 70.7%
4646263 2003.1.1.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › CbiJ 0.55 41.0 4.29e-01 87.5% 86.7%
5019986 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 45.0 3.63e-01 87.5% 47.8%
3947471 2002.1.1.130 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › G3P_antiterm 0.54 42.0 3.80e-01 80.9% 91.8%
1106636 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.54 47.0 3.59e-01 91.9% 75.8%
4104702 2003.1.1.37 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C 0.54 41.0 3.75e-01 80.9% 93.0%
4975797 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 44.0 3.40e-01 87.5% 70.3%
5067044 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 45.0 3.50e-01 92.6% 74.9%
5028363 2005.1.1.16 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Diphthami_syn_2 0.52 46.0 3.86e-01 96.3% 92.3%
4004669 2007.3.1.2 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › CoA_binding 0.52 42.0 4.08e-01 86.8% 81.9%
4324598 2006.1.4.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › 5_3_exonuc_N 0.52 40.0 3.62e-01 81.6% 87.0%
4240592 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 46.0 3.51e-01 97.1% 91.1%
5024528 2002.1.1.174 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.50 42.0 3.28e-01 89.0% 84.2%
D2 medium residues 145-205_217-237_250-298
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4o1eB00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.66 52.0 4.10e-01 100.0% 40.8%
5xd7A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 50.0 4.07e-01 98.5% 49.6%
3tr9B00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.59 54.0 4.25e-01 100.0% 60.4%
4zkdA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 54.0 4.34e-01 100.0% 84.7%
4o53A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 52.0 4.23e-01 100.0% 57.8%
2qgyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.58 48.0 3.94e-01 98.5% 49.2%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 4.10e-01 98.5% 66.3%
3vpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 44.0 4.31e-01 99.2% 77.3%
4aurA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 50.0 3.97e-01 100.0% 68.6%
1snyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.08e-01 100.0% 85.5%
3s5nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 50.0 3.86e-01 100.0% 70.8%
6iheA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 40.0 4.00e-01 97.7% 74.3%
3bc9A02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 48.0 3.70e-01 100.0% 46.3%
2pftA00 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.53 44.0 2.96e-01 90.1% 35.6%
1hyeA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 4.10e-01 98.5% 76.2%
3frhA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 40.0 3.57e-01 96.2% 56.8%
4p1zA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 38.0 3.85e-01 97.7% 77.2%
3ik4A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 47.0 3.86e-01 100.0% 56.8%
3nywD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 47.0 3.98e-01 99.2% 83.6%
2cx6A00 3.30.370.10 Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › Barstar-like 0.51 34.0 3.98e-01 91.6% 98.9%
5mp7A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 46.0 4.32e-01 98.5% 90.7%
1y8cA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 3.56e-01 96.2% 59.1%
6yuqA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 45.0 3.66e-01 97.7% 83.5%
4oo3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 36.0 3.55e-01 100.0% 68.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4098501 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.84 71.0 5.57e-01 100.0% 46.5%
3940090 2008.1.1.12 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Rad10 0.70 38.0 4.03e-01 95.4% 57.5%
2988625 2003.1.1.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Malic_M 0.60 32.0 4.17e-01 88.5% 95.7%
3652028 2003.1.1.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N 0.59 41.0 3.30e-01 97.7% 35.8%
3281593 2003.1.1.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3HCDH_N 0.58 40.0 3.57e-01 97.7% 48.4%
5005144 2002.1.1.57 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.58 52.0 3.80e-01 100.0% 52.0%
5041441 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.57 40.0 3.84e-01 80.9% 61.9%
3648396 2003.4.1.0 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes 0.56 51.0 3.56e-01 100.0% 72.0%
4526658 2002.1.1.3 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM 0.56 50.0 4.05e-01 99.2% 58.9%
3739997 2002.1.1.189 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM 0.55 49.0 3.93e-01 100.0% 65.3%
3260634 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.54 49.0 4.23e-01 100.0% 68.1%
3988446 2002.1.1.35 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DAHP_synth_1 0.54 49.0 3.66e-01 100.0% 43.8%
3947281 2003.1.1.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA 0.54 49.0 3.80e-01 100.0% 72.5%
3183279 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.54 50.0 3.66e-01 100.0% 67.8%
3971427 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 48.0 3.94e-01 100.0% 58.8%
4478613 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.53 47.0 4.04e-01 100.0% 89.0%
3291341 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.52 35.0 3.77e-01 98.5% 80.9%
3432581 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.52 43.0 3.10e-01 96.2% 30.1%
5030133 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.51 45.0 3.90e-01 94.7% 69.3%
3178256 2003.1.5.114 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_34 0.51 44.0 3.34e-01 95.4% 47.4%
5000621 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.51 44.0 3.90e-01 97.7% 64.6%