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ON529865.1__UTC30011.1__STASHLEY_00770__00078

Bact-Vir

ON529865.1__UTC30011.1__STASHLEY_00770__00078

Identity

Accession:
ON529865 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 32-68_162-179
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nbwA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.77 66.0 4.93e-01 94.5% 100.0%
4mmhA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.72 50.0 3.19e-01 74.5% 53.8%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.69 51.0 3.78e-01 81.8% 77.3%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.67 47.0 3.13e-01 74.5% 90.4%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.66 44.0 2.96e-01 70.9% 88.8%
3uc2A00 2.60.40.3340 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 0.65 52.0 4.03e-01 89.1% 95.2%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 44.0 3.96e-01 70.9% 64.0%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.64 47.0 3.09e-01 78.2% 88.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.64 53.0 4.59e-01 96.4% 88.8%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 44.0 2.94e-01 74.5% 31.8%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 46.0 3.41e-01 80.0% 37.6%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 52.0 4.07e-01 94.5% 49.2%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 51.0 4.19e-01 90.9% 86.0%
2q2rA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.62 50.0 3.72e-01 98.2% 83.8%
5oyhD00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.61 53.0 3.71e-01 100.0% 29.2%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 41.0 2.70e-01 70.9% 26.0%
6ksrA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 50.0 3.68e-01 96.4% 100.0%
4zfvB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 50.0 3.45e-01 90.9% 94.7%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 3.48e-01 98.2% 83.8%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 43.0 3.12e-01 81.8% 77.8%
1bdgA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 48.0 3.55e-01 100.0% 93.9%
7t28A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 44.0 2.96e-01 89.1% 20.3%
4f8bA00 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.57 45.0 3.39e-01 85.5% 69.8%
3pg4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.57 46.0 3.15e-01 96.4% 23.0%
1ue6D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 42.0 3.45e-01 80.0% 51.9%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 42.0 3.47e-01 78.2% 74.5%
3g8yA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 2.74e-01 94.5% 35.0%
5xd7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 48.0 3.76e-01 100.0% 87.4%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 43.0 3.18e-01 85.5% 70.5%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.08e-01 76.4% 38.3%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 46.0 3.67e-01 100.0% 81.5%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 40.0 3.38e-01 78.2% 70.4%
3bp1A02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.55 46.0 3.54e-01 96.4% 64.7%
2lmeA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 40.0 3.39e-01 83.6% 69.5%
1dpgA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 48.0 2.97e-01 98.2% 42.1%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.42e-01 85.5% 52.9%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.54 43.0 3.00e-01 98.2% 84.0%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.54 46.0 3.22e-01 100.0% 73.3%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 42.0 3.39e-01 100.0% 87.0%
2imhA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 44.0 3.08e-01 100.0% 72.3%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 37.0 2.96e-01 76.4% 93.5%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 41.0 3.17e-01 92.7% 93.7%
1a1aB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 45.0 3.66e-01 98.2% 79.4%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.50 41.0 3.08e-01 96.4% 78.7%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 40.0 2.85e-01 100.0% 49.3%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3819740 284.1.3.4 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.71 59.0 5.13e-01 98.2% 100.0%
3318685 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.70 57.0 4.76e-01 96.4% 84.8%
3802306 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.70 57.0 4.84e-01 94.5% 92.6%
3887951 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.69 46.0 3.59e-01 70.9% 33.0%
4423214 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.68 46.0 3.67e-01 72.7% 36.2%
3589803 2484.1.1.144 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.68 53.0 4.31e-01 83.6% 59.0%
5084021 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.68 47.0 3.88e-01 72.7% 59.2%
3805804 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.66 53.0 4.68e-01 92.7% 98.8%
3295575 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.64 52.0 4.37e-01 94.5% 87.0%
4995744 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.62 47.0 3.62e-01 81.8% 39.8%
4955671 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.62 48.0 4.28e-01 85.5% 87.5%
3605064 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.61 53.0 3.07e-01 96.4% 20.2%
4306959 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.61 50.0 3.82e-01 89.1% 87.2%
3604640 3740.1.1.1 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.61 44.0 2.86e-01 78.2% 27.1%
4397552 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.60 50.0 3.83e-01 92.7% 81.6%
3367574 304.6.1.3 a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE 0.59 40.0 2.78e-01 70.9% 31.3%
5035818 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.59 51.0 3.99e-01 96.4% 87.0%
4206673 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.58 50.0 3.83e-01 96.4% 84.8%
3658323 284.1.2.1 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C 0.58 45.0 3.81e-01 90.9% 88.6%
4606103 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.58 49.0 3.85e-01 96.4% 79.2%
4564098 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.58 49.0 3.84e-01 96.4% 86.7%
1281053 230.1.1.6 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › QueF 0.57 45.0 3.33e-01 85.5% 75.9%
3723546 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.57 47.0 2.96e-01 96.4% 43.3%
3924939 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.57 49.0 3.94e-01 100.0% 68.7%
3228242 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.57 48.0 4.00e-01 96.4% 81.0%
4029331 2484.1.1.5 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1 0.56 47.0 3.16e-01 100.0% 68.4%
3999127 109.21.1.8 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.56 47.0 2.65e-01 96.4% 14.6%
3770448 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 44.0 3.31e-01 94.5% 60.6%
4054903 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.55 46.0 2.58e-01 96.4% 19.2%
4499269 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.55 47.0 2.76e-01 100.0% 30.9%
4942959 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.55 46.0 3.03e-01 92.7% 35.4%
3510139 223.1.1.3 a+b three layers › Profilin-like › sensor domains › sensor domains › GAF 0.55 47.0 3.27e-01 100.0% 63.1%
3300222 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.55 46.0 2.84e-01 100.0% 16.4%
4929306 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 47.0 2.85e-01 100.0% 86.2%
4280539 109.21.1.8 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.54 45.0 2.53e-01 96.4% 20.0%
3964752 868.1.1.1 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH 0.54 46.0 3.41e-01 100.0% 73.4%
3213868 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 3.50e-01 98.2% 83.7%
3514912 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.54 44.0 4.05e-01 96.4% 88.0%
4534466 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.53 43.0 3.77e-01 100.0% 68.4%
4978349 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.53 42.0 3.28e-01 92.7% 63.1%
3225873 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.52 43.0 2.64e-01 92.7% 64.1%
2095479 1170.1.2.3 beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) › Phage_glycop_gL 0.52 34.0 2.83e-01 100.0% 35.2%
5063914 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.52 45.0 3.07e-01 100.0% 40.5%
3206409 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 41.0 2.94e-01 87.3% 86.9%
4453642 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 44.0 3.12e-01 96.4% 89.7%
3501861 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 39.0 3.20e-01 85.5% 80.0%
D2 medium residues 69-161
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ktwA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.75 68.0 5.67e-01 100.0% 64.4%
3rjtA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.75 57.0 4.31e-01 80.6% 44.9%
4h08A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.73 56.0 4.32e-01 80.6% 49.0%
4q9aA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.72 55.0 4.13e-01 80.6% 46.1%
3dc7A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.71 56.0 4.26e-01 83.9% 51.6%
5jx5A00 3.20.20.40 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase 0.70 63.0 4.30e-01 98.9% 67.1%
1h5qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 55.0 3.98e-01 83.9% 45.8%
4m8kA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.70 56.0 4.15e-01 83.9% 39.0%
4lunU00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 50.0 3.47e-01 76.3% 28.3%
1z8hA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.68 54.0 4.14e-01 83.9% 45.0%
8e83B01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.65 50.0 3.23e-01 81.7% 75.8%
2qw5A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.65 58.0 3.95e-01 97.8% 75.8%
2q0qA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.65 51.0 3.89e-01 83.9% 47.4%
4yrbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 49.0 3.74e-01 79.6% 53.4%
5bjuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 51.0 3.52e-01 83.9% 47.2%
1s4kA00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.64 44.0 4.06e-01 72.0% 55.0%
1a9yA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 50.0 3.82e-01 83.9% 63.2%
4is2A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 48.0 3.74e-01 81.7% 58.9%
7ezyA01 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.62 43.0 4.00e-01 72.0% 57.4%
3cs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 56.0 4.86e-01 98.9% 89.9%
1a0cA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 55.0 3.51e-01 97.8% 41.4%
3thxA02 3.30.420.110 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain 0.61 56.0 4.59e-01 100.0% 64.2%
2pk3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 48.0 3.65e-01 83.9% 60.3%
3tsnA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.60 51.0 3.49e-01 96.8% 40.4%
3i8oA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.60 54.0 4.84e-01 98.9% 92.2%
1wraA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.60 54.0 3.78e-01 100.0% 72.0%
4kq9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 54.0 4.21e-01 100.0% 60.5%
3rotA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 54.0 4.77e-01 100.0% 86.9%
1c41A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.60 44.0 3.72e-01 79.6% 55.2%
3qi7A02 3.40.50.11390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 54.0 4.44e-01 100.0% 77.2%
1gcaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.39e-01 100.0% 81.4%
5ktkA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 49.0 3.14e-01 91.4% 40.3%
6ln3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 46.0 3.56e-01 83.9% 43.1%
3hs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 53.0 4.62e-01 100.0% 87.7%
3td9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 52.0 4.41e-01 98.9% 92.7%
3e66A01 3.30.420.230 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region 0.58 43.0 3.62e-01 100.0% 46.0%
3a21B01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 50.0 3.59e-01 98.9% 62.5%
4ga6A02 1.20.970.50 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › 0.57 43.0 3.68e-01 80.6% 69.7%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 51.0 4.31e-01 98.9% 79.4%
3v9pB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 44.0 3.46e-01 82.8% 44.6%
5ywwA01 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.57 50.0 4.71e-01 98.9% 93.0%
2wjwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 51.0 4.20e-01 98.9% 90.8%
6l1kA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 49.0 4.05e-01 100.0% 88.9%
1lvlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 46.0 3.56e-01 91.4% 81.6%
7zghA01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.56 49.0 3.25e-01 100.0% 78.2%
3k32B00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 46.0 3.65e-01 92.5% 58.7%
2wyoA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.54 49.0 4.28e-01 100.0% 97.8%
2gm3A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 49.0 4.14e-01 100.0% 81.7%
3lv8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 44.0 3.46e-01 92.5% 62.3%
1qhhD01 3.30.160.800 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 32.0 3.48e-01 72.0% 75.0%
4i14A02 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.52 36.0 3.24e-01 71.0% 57.9%
1e9fA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 3.16e-01 83.9% 57.9%
5c9gF01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 37.0 3.03e-01 78.5% 48.8%
1ps9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 3.77e-01 94.6% 73.8%
1edzA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.51 42.0 3.87e-01 94.6% 96.2%
2ayiA01 3.40.1830.10 Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) 0.51 45.0 3.71e-01 100.0% 78.9%
4b1bA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 2.80e-01 94.6% 71.9%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.50 44.0 3.85e-01 100.0% 93.1%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995140 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.75 58.0 4.90e-01 81.7% 51.7%
153245 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.73 56.0 4.33e-01 80.6% 49.0%
3479417 2005.1.1.36 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.73 53.0 4.56e-01 75.3% 71.4%
4976623 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 65.0 5.28e-01 100.0% 54.3%
3683988 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.72 63.0 4.73e-01 93.5% 75.2%
5046730 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.72 63.0 5.59e-01 96.8% 89.6%
4999907 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.71 63.0 4.50e-01 97.8% 35.3%
4998772 2484.1.1.337 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RRXRR 0.71 63.0 5.21e-01 97.8% 58.8%
4996735 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 63.0 5.01e-01 97.8% 53.9%
4961801 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.70 63.0 4.84e-01 100.0% 54.6%
1734609 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.69 47.0 4.36e-01 76.3% 55.6%
4979039 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.69 63.0 4.78e-01 100.0% 54.1%
10058 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.68 54.0 4.13e-01 83.9% 45.3%
4975908 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.68 60.0 4.59e-01 100.0% 53.2%
5079107 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 49.0 4.38e-01 76.3% 76.2%
5081563 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.65 55.0 4.05e-01 93.5% 66.0%
4977497 2004.1.1.202 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 0.65 51.0 3.99e-01 82.8% 64.6%
None 0.65 54.0 4.08e-01 91.4% 69.3%
1884917 2003.1.1.61 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › KR 0.64 50.0 3.64e-01 83.9% 37.3%
3487085 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.64 45.0 3.83e-01 76.3% 44.4%
4800656 12.1.1.28 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_106 0.64 46.0 4.41e-01 74.2% 66.3%
5053588 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.64 54.0 3.93e-01 95.7% 77.8%
4975061 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.63 45.0 3.55e-01 76.3% 35.9%
3379577 2003.1.1.52 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › RmlD_sub_bind 0.63 49.0 3.77e-01 81.7% 51.8%
3773669 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.63 48.0 3.64e-01 82.8% 62.2%
4946728 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 46.0 3.58e-01 80.6% 61.9%
3603907 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.60 54.0 4.61e-01 98.9% 79.3%
4948791 2003.1.1.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 3Beta_HSD 0.60 47.0 3.72e-01 84.9% 48.2%
4997528 4244.1.1.5 a/b three-layered sandwiches › EreA/ChaN-like › EreA/ChaN-like › EreA/ChaN-like › TraB_PrgY_gumN 0.59 50.0 3.95e-01 92.5% 91.3%
5075020 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.59 53.0 4.63e-01 100.0% 85.7%
4952334 7510.1.1.0 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.59 50.0 4.45e-01 96.8% 77.1%
5063452 4143.1.1.0 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like 0.59 42.0 3.92e-01 75.3% 59.2%
3176999 2006.1.4.25 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_I 0.59 53.0 3.96e-01 100.0% 63.0%
3701933 301.1.1.0 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like 0.58 44.0 4.24e-01 80.6% 76.2%
1934666 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.58 51.0 4.68e-01 98.9% 87.8%
5050082 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.57 47.0 3.61e-01 91.4% 80.4%
5057727 2004.1.1.202 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 0.56 43.0 3.50e-01 83.9% 72.4%
4043588 2007.1.14.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Ferrochelatase 0.54 48.0 3.87e-01 100.0% 73.5%
3940020 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 44.0 3.98e-01 94.6% 64.6%
4328604 2007.1.14.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Ferrochelatase 0.54 47.0 4.00e-01 100.0% 88.7%
4657894 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.53 47.0 4.16e-01 100.0% 87.1%
5028756 2006.1.4.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 0.53 46.0 4.21e-01 100.0% 80.8%
4984843 4143.1.1.1 a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP 0.52 48.0 4.64e-01 100.0% 91.4%
3296128 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 34.0 3.80e-01 79.6% 88.6%
3306022 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.52 42.0 4.24e-01 96.8% 86.3%
4963304 2005.1.1.3 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.52 45.0 3.98e-01 100.0% 90.0%
5026648 2006.1.4.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_9 0.51 44.0 4.10e-01 98.9% 88.3%
3605800 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 36.0 2.52e-01 73.1% 63.2%
4976463 7542.1.1.0 a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain 0.51 43.0 3.81e-01 100.0% 68.0%
3822302 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.51 41.0 3.58e-01 98.9% 57.2%
3926170 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.50 34.0 3.45e-01 77.4% 68.4%
3343216 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.50 42.0 3.94e-01 100.0% 74.2%