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ON529867.1__USN16739.1__STRZYGA_00180__00018
Bact-VirON529867.1__USN16739.1__STRZYGA_00180__00018
Identity
- Accession:
- ON529867 ↗
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Taxonomy
TaxID: 2948609
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-57
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.71 | 54.0 | 5.41e-01 | 83.3% | 98.2% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.70 | 52.0 | 5.45e-01 | 81.5% | 95.9% |
| 2xzm600 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.68 | 50.0 | 4.48e-01 | 81.5% | 67.5% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 44.0 | 4.66e-01 | 77.8% | 83.0% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 45.0 | 2.83e-01 | 87.0% | 14.0% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.61 | 48.0 | 4.49e-01 | 94.4% | 71.2% |
| 2g5dA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.60 | 47.0 | 3.29e-01 | 90.7% | 71.6% |
| 5xyib00 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.59 | 44.0 | 3.90e-01 | 81.5% | 67.1% |
| 4czwA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 46.0 | 2.79e-01 | 87.0% | 19.4% |
| 2i1sA00 | 3.10.290.30 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like | 0.59 | 46.0 | 3.45e-01 | 100.0% | 66.3% |
| 3un0A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.58 | 46.0 | 3.75e-01 | 90.7% | 98.2% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 44.0 | 3.34e-01 | 88.9% | 38.9% |
| 4eq3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.81e-01 | 90.7% | 55.1% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.57 | 42.0 | 3.69e-01 | 81.5% | 53.0% |
| 2ypjA00 | 2.60.120.1070 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 44.0 | 3.54e-01 | 88.9% | 46.7% |
| 1f6fB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.70e-01 | 88.9% | 52.6% |
| 2hg6A00 | 3.90.1650.10 | Alpha Beta › Alpha-Beta Complex › PA1123-like › PA1123-like | 0.56 | 45.0 | 3.71e-01 | 92.6% | 65.1% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 42.0 | 3.30e-01 | 88.9% | 47.8% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.56 | 41.0 | 4.01e-01 | 83.3% | 93.5% |
| 2eefA01 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.55 | 44.0 | 3.43e-01 | 90.7% | 48.0% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 2.88e-01 | 88.9% | 59.3% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.55 | 44.0 | 3.79e-01 | 92.6% | 62.2% |
| 3kuzB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 41.0 | 3.47e-01 | 88.9% | 92.7% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 42.0 | 3.46e-01 | 88.9% | 57.8% |
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 41.0 | 3.04e-01 | 88.9% | 52.9% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 3.59e-01 | 90.7% | 53.1% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 43.0 | 4.13e-01 | 88.9% | 98.4% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.54 | 40.0 | 3.71e-01 | 81.5% | 61.1% |
| 3besR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.52e-01 | 83.3% | 55.4% |
| 1k0hA00 | 2.40.10.180 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins | 0.53 | 39.0 | 3.21e-01 | 83.3% | 58.1% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.58e-01 | 88.9% | 57.5% |
| 4ecnA02 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.53 | 40.0 | 3.28e-01 | 90.7% | 49.2% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.52 | 40.0 | 3.26e-01 | 85.2% | 47.7% |
| 1f94A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.52 | 38.0 | 3.67e-01 | 90.7% | 69.8% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.12e-01 | 81.5% | 74.5% |
| 1n9pA00 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.52 | 40.0 | 2.82e-01 | 88.9% | 42.6% |
| 6kwzA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 40.0 | 3.37e-01 | 87.0% | 74.5% |
| 7y6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 3.41e-01 | 88.9% | 53.6% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.51 | 38.0 | 2.94e-01 | 85.2% | 83.1% |
| 2qejD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 38.0 | 3.09e-01 | 85.2% | 79.7% |
| 5kycB02 | 2.20.210.10 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily | 0.51 | 41.0 | 4.17e-01 | 92.6% | 96.2% |
| 2kl5A00 | 3.50.4.20 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Uncharacterised protein DUF1027 | 0.51 | 38.0 | 3.21e-01 | 88.9% | 51.8% |
| 3snoA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.50 | 38.0 | 3.04e-01 | 85.2% | 98.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5019693 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.73 | 54.0 | 5.61e-01 | 79.6% | 100.0% |
| 4507405 | 375.1.1.128 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT | 0.72 | 54.0 | 5.80e-01 | 87.0% | 100.0% |
| 5027909 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 50.0 | 4.90e-01 | 79.6% | 66.7% |
| 5077070 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.72 | 56.0 | 5.48e-01 | 92.6% | 78.3% |
| 4161260 | 7056.1.1.3 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zn_ribbon_SprT | 0.71 | 54.0 | 5.75e-01 | 87.0% | 100.0% |
| 3507461 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 56.0 | 5.59e-01 | 85.2% | 96.4% |
| 4930203 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.71 | 54.0 | 5.39e-01 | 83.3% | 92.7% |
| 4992429 | 375.12.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related | 0.71 | 49.0 | 4.06e-01 | 81.5% | 40.0% |
| 4593851 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.71 | 48.0 | 3.83e-01 | 79.6% | 34.5% |
| 3440046 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 48.0 | 5.21e-01 | 77.8% | 97.5% |
| 5027281 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 58.0 | 5.69e-01 | 94.4% | 93.1% |
| 4956150 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 55.0 | 5.51e-01 | 90.7% | 96.4% |
| 4933437 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.68 | 47.0 | 3.81e-01 | 79.6% | 37.0% |
| 5004620 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 46.0 | 5.09e-01 | 77.8% | 97.5% |
| 4970537 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 45.0 | 4.87e-01 | 77.8% | 95.0% |
| 5041477 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.67 | 53.0 | 5.23e-01 | 90.7% | 81.7% |
| 5022651 | 375.11.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain in CopZ › Zinc-binding domain in CopZ | 0.67 | 45.0 | 4.15e-01 | 77.8% | 54.3% |
| 3595896 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.67 | 47.0 | 5.00e-01 | 88.9% | 91.1% |
| 4932189 | 4076.2.1.6 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF1922 | 0.66 | 53.0 | 4.98e-01 | 94.4% | 71.4% |
| 4028011 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 46.0 | 4.91e-01 | 75.9% | 97.8% |
| 5078363 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.65 | 52.0 | 3.16e-01 | 90.7% | 21.5% |
| 4970821 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.65 | 51.0 | 4.75e-01 | 90.7% | 70.0% |
| 3928042 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 53.0 | 4.36e-01 | 92.6% | 59.0% |
| 5021275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 45.0 | 3.61e-01 | 88.9% | 36.4% |
| 3210799 | 375.1.1.52 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_6 | 0.64 | 45.0 | 4.28e-01 | 81.5% | 64.1% |
| 3950331 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.62 | 50.0 | 4.93e-01 | 92.6% | 100.0% |
| 4504924 | 301.9.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › HypA Ni-binding domain › HypA Ni-binding domain › HypA | 0.60 | 45.0 | 3.64e-01 | 88.9% | 39.8% |
| 4941474 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 3.82e-01 | 88.9% | 67.4% |
| 5069740 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.56 | 39.0 | 3.50e-01 | 85.2% | 49.4% |
| 3597115 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 43.0 | 3.43e-01 | 87.0% | 53.9% |
| 3236126 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.55 | 42.0 | 3.33e-01 | 87.0% | 72.8% |
| 3606960 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 3.22e-01 | 92.6% | 54.2% |
| 3619202 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.54 | 42.0 | 3.74e-01 | 94.4% | 58.8% |
| 4886908 | 4167.1.1.1 ↗ | beta complex topology › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › LlgE_F_G_D1 | 0.54 | 38.0 | 3.66e-01 | 77.8% | 65.1% |
| 1348620 | 221.11.1.1 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in probable beta-lactamase › beta-grasp fold domain in probable beta-lactamase › DUF4888 | 0.54 | 41.0 | 3.76e-01 | 88.9% | 63.6% |
| 3422852 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.53 | 41.0 | 3.37e-01 | 96.3% | 79.2% |
| 2565990 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.52 | 40.0 | 3.37e-01 | 87.0% | 74.5% |
| 4032992 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 36.0 | 3.02e-01 | 75.9% | 88.2% |
| 1063821 | 3707.1.1.1 ↗ | a+b two layers › SdbC C-terminal domain › SdbC C-terminal domain › SdbC C-terminal domain › SdbC_C | 0.51 | 42.0 | 4.04e-01 | 92.6% | 88.7% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 39.0 | 3.69e-01 | 83.3% | 92.3% |
| 3258223 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 2.99e-01 | 77.8% | 82.7% |
| 4959737 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.51 | 40.0 | 3.50e-01 | 88.9% | 63.5% |