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ON529867.1__USN16762.1__STRZYGA_00410__00041
Bact-VirON529867.1__USN16762.1__STRZYGA_00410__00041
Identity
- Accession:
- ON529867 ↗
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Taxonomy
TaxID: 2948609
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-76
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.78 | 66.0 | 5.22e-01 | 100.0% | 46.0% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.73 | 60.0 | 5.64e-01 | 100.0% | 76.1% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 58.0 | 4.53e-01 | 100.0% | 41.3% |
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.68 | 56.0 | 5.34e-01 | 100.0% | 82.9% |
| 3hjeA03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.61 | 42.0 | 3.64e-01 | 74.5% | 100.0% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.60 | 40.0 | 3.95e-01 | 100.0% | 65.0% |
| 2v7fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 3.39e-01 | 83.6% | 36.0% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.59 | 51.0 | 3.59e-01 | 100.0% | 51.7% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.59 | 48.0 | 4.14e-01 | 98.2% | 66.3% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 3.64e-01 | 94.5% | 39.1% |
| 3om0A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 48.0 | 3.32e-01 | 100.0% | 58.9% |
| 1xn8A00 | 1.10.3230.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › YqbG-like | 0.56 | 46.0 | 3.62e-01 | 98.2% | 50.4% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 3.36e-01 | 94.5% | 33.8% |
| 3hhgE01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.05e-01 | 94.5% | 67.0% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.56 | 46.0 | 3.43e-01 | 100.0% | 59.1% |
| 4gkfA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.55 | 41.0 | 3.12e-01 | 83.6% | 65.1% |
| 4h3tA02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.55 | 45.0 | 3.50e-01 | 100.0% | 66.7% |
| 1x9nA01 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.53 | 44.0 | 2.80e-01 | 90.9% | 32.4% |
| 1ivhA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.51 | 37.0 | 2.97e-01 | 80.0% | 54.1% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.50 | 43.0 | 3.73e-01 | 98.2% | 70.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2818084 | 101.1.9.22 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_54 | 0.70 | 57.0 | 4.68e-01 | 100.0% | 49.0% |
| 1316879 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 60.0 | 5.89e-01 | 100.0% | 90.2% |
| 4158216 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.68 | 53.0 | 5.23e-01 | 100.0% | 81.7% |
| 4997943 | 5039.1.1.2 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › DUF420 | 0.66 | 48.0 | 3.56e-01 | 78.2% | 65.3% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 54.0 | 5.01e-01 | 100.0% | 80.0% |
| 4944024 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 51.0 | 3.41e-01 | 100.0% | 26.2% |
| 3530639 | 101.1.1.229 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Tri-helical_Ada2b_C | 0.61 | 41.0 | 3.65e-01 | 70.9% | 77.5% |
| 5025449 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 49.0 | 3.32e-01 | 98.2% | 25.0% |
| 5059378 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 51.0 | 3.37e-01 | 100.0% | 26.2% |
| 4943312 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 50.0 | 3.33e-01 | 100.0% | 25.5% |
| 5051913 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 49.0 | 3.23e-01 | 96.4% | 26.2% |
| 5029331 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 49.0 | 3.37e-01 | 100.0% | 27.4% |
| 5052815 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 51.0 | 3.35e-01 | 100.0% | 25.0% |
| 3754179 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.59 | 42.0 | 3.36e-01 | 80.0% | 84.0% |
| 5050436 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 50.0 | 3.28e-01 | 100.0% | 25.5% |
| 4945870 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 49.0 | 3.39e-01 | 100.0% | 30.0% |
| 3390239 | 3525.1.1.0 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain | 0.58 | 45.0 | 4.38e-01 | 90.9% | 89.2% |
| 4154019 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.57 | 48.0 | 3.21e-01 | 100.0% | 26.5% |
| 3280832 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 48.0 | 3.21e-01 | 100.0% | 26.5% |
| 5039200 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 46.0 | 3.10e-01 | 96.4% | 27.0% |
| 4340215 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 47.0 | 3.20e-01 | 100.0% | 28.1% |
| 4368415 | 4009.1.1.24 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › AgrB | 0.56 | 46.0 | 3.47e-01 | 94.5% | 37.0% |
| 5061570 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 46.0 | 3.11e-01 | 100.0% | 24.9% |
| 5017875 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 46.0 | 3.45e-01 | 100.0% | 40.6% |
| 3988191 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.55 | 46.0 | 4.29e-01 | 100.0% | 80.0% |
| 3449811 | 101.1.10.38 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF247 | 0.55 | 46.0 | 3.67e-01 | 100.0% | 95.2% |
| 4945581 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 44.0 | 3.38e-01 | 100.0% | 38.7% |
| 5067173 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 43.0 | 2.91e-01 | 100.0% | 22.3% |
| None | — | 0.53 | 44.0 | 2.88e-01 | 100.0% | 96.1% | |
| 4482662 | 6130.1.1.0 ↗ | alpha complex topology › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain › Selenocysteine synthase N-terminal domain | 0.52 | 42.0 | 4.13e-01 | 100.0% | 89.2% |
| 4348080 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 42.0 | 2.59e-01 | 100.0% | 13.5% |
| 3583637 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.51 | 41.0 | 3.36e-01 | 100.0% | 71.2% |