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ON531987.1__UUG68450.1__X__00031

Bact-Vir

ON531987.1__UUG68450.1__X__00031

Identity

Accession:
ON531987 ↗
Kingdom:
phage

Quality

73.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-65
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02945.22 best Endonuclease_7 32.8 7.40e-08 87.9% 47.6%
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e7lA01 3.40.1800.10 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases 0.74 65.0 5.88e-01 100.0% 73.8%
2y43A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.67 39.0 3.43e-01 79.3% 37.5%
2d8sA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.61 39.0 3.58e-01 77.6% 47.5%
3goxA03 3.40.1800.10 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases 0.59 48.0 4.34e-01 96.6% 65.4%
6rwcA02 2.20.25.590 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 33.0 3.73e-01 89.7% 74.4%
2xzmZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.59 43.0 3.66e-01 79.3% 51.5%
4i43B02 3.30.43.40 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain 0.57 31.0 2.55e-01 77.6% 25.4%
1u2kA02 1.10.420.10 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 0.54 37.0 2.96e-01 74.1% 48.4%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.54 46.0 3.62e-01 100.0% 78.5%
6nrzA02 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 41.0 2.60e-01 89.7% 57.7%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.51 45.0 4.07e-01 100.0% 85.2%
5zwnQ01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 31.0 2.90e-01 91.4% 45.0%
2x5rA01 3.30.470.40 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.50 36.0 3.05e-01 100.0% 40.9%
3pg6B00 3.30.390.130 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.50 39.0 3.03e-01 86.2% 85.1%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2991844 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.80 72.0 5.79e-01 100.0% 59.6%
2550470 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.79 70.0 5.04e-01 100.0% 39.2%
4187709 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.78 69.0 4.13e-01 100.0% 15.5%
8235 378.1.1.3 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 0.74 65.0 5.40e-01 100.0% 57.3%
3869753 101.1.2.602 alpha arrays › HTH › HTH › winged helix domain › RH_dom 0.73 53.0 4.67e-01 91.4% 52.9%
4135424 376.1.1.23 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 0.73 47.0 4.87e-01 94.8% 70.9%
3876488 632.7.1.31 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › RH_dom 0.72 53.0 4.71e-01 94.8% 54.1%
4370946 378.1.1.10 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 0.70 61.0 4.43e-01 100.0% 39.4%
2322754 376.1.2.3 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_4 0.69 52.0 4.87e-01 96.6% 64.9%
3611194 376.1.3.32 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › RH_dom 0.68 56.0 4.67e-01 98.3% 51.9%
3234939 376.1.3.3 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE 0.67 43.0 4.19e-01 81.0% 58.5%
3370105 376.1.3.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD 0.65 44.0 4.44e-01 81.0% 68.3%
3311213 376.1.1.1 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.64 43.0 3.92e-01 79.3% 53.3%
3715952 376.1.1.20 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.63 46.0 4.07e-01 100.0% 51.1%
2628026 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.63 54.0 3.74e-01 100.0% 29.2%
3286852 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.62 53.0 4.50e-01 100.0% 65.0%
3203083 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 51.0 4.31e-01 98.3% 57.0%
2673846 3167.1.1.1 a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e 0.60 44.0 3.92e-01 79.3% 65.1%
4012176 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.59 51.0 4.34e-01 100.0% 59.0%
1002460 378.1.1.3 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 0.59 48.0 4.30e-01 96.6% 63.9%
3229165 3167.1.1.1 a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e 0.58 42.0 3.74e-01 79.3% 62.5%
3916229 376.1.1.21 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.57 46.0 4.23e-01 98.3% 68.0%
3599253 3167.1.1.0 a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) 0.56 43.0 3.92e-01 86.2% 67.5%
3230977 4099.1.1.48 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Rgr-1_C 0.56 44.0 3.39e-01 86.2% 90.8%
3559916 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.54 46.0 3.17e-01 100.0% 26.5%
4098787 136.1.1.1 alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase 0.52 36.0 2.04e-01 74.1% 8.1%
3196510 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.52 38.0 2.95e-01 82.8% 92.7%
3617341 5.1.4.320 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 0.51 42.0 2.62e-01 100.0% 25.4%
5001766 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.50 36.0 2.44e-01 75.9% 94.2%
4927545 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.50 41.0 3.91e-01 96.6% 92.9%