←Back to structures
ON548417.1__UUV46031.1__X__00145
Bact-VirON548417.1__UUV46031.1__X__00145
Identity
- Accession:
- ON548417 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-61
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 59.0 | 5.55e-01 | 100.0% | 68.3% |
| 6ya6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 54.0 | 4.37e-01 | 100.0% | 48.0% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.66 | 55.0 | 5.23e-01 | 100.0% | 79.4% |
| 1io1A03 | 2.30.220.10 | Mainly Beta › Roll › f41 fragment of flagellin, C-terminal domain › f41 fragment of flagellin, C-terminal domain | 0.64 | 51.0 | 4.24e-01 | 100.0% | 49.5% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 55.0 | 5.00e-01 | 100.0% | 75.0% |
| 3kg7B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.63 | 50.0 | 3.20e-01 | 90.6% | 81.8% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.62 | 47.0 | 4.20e-01 | 100.0% | 57.9% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 49.0 | 3.85e-01 | 100.0% | 39.2% |
| 3m4uB00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 49.0 | 3.09e-01 | 100.0% | 16.6% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 42.0 | 4.20e-01 | 86.8% | 69.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 47.0 | 4.41e-01 | 100.0% | 75.0% |
| 2e5kA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 46.0 | 4.49e-01 | 100.0% | 81.2% |
| 1a31A03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.56 | 44.0 | 3.32e-01 | 92.5% | 44.7% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 47.0 | 2.97e-01 | 100.0% | 33.8% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 44.0 | 3.39e-01 | 94.3% | 60.6% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 44.0 | 3.71e-01 | 100.0% | 67.6% |
| 1gd5A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 37.0 | 2.92e-01 | 75.5% | 30.0% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.84e-01 | 100.0% | 69.2% |
| 2qh0A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 41.0 | 3.25e-01 | 90.6% | 98.4% |
| 2y1sA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.52 | 42.0 | 3.54e-01 | 100.0% | 73.1% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.23e-01 | 100.0% | 38.9% |
| 1sqiA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 40.0 | 2.98e-01 | 94.3% | 80.2% |
| 1vpkA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 43.0 | 3.39e-01 | 100.0% | 58.8% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 70.0 | 6.23e-01 | 100.0% | 79.7% |
| 4000858 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.76 | 67.0 | 6.16e-01 | 100.0% | 78.6% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 65.0 | 5.68e-01 | 100.0% | 85.0% |
| 3503332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 61.0 | 5.70e-01 | 100.0% | 90.8% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.67 | 57.0 | 5.13e-01 | 100.0% | 68.0% |
| 4643742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 57.0 | 4.94e-01 | 100.0% | 67.1% |
| 3695624 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 52.0 | 3.49e-01 | 90.6% | 61.4% |
| 3282644 | 2.24.1.2 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF7489 | 0.64 | 44.0 | 4.21e-01 | 90.6% | 60.0% |
| 4377781 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 51.0 | 4.64e-01 | 100.0% | 66.3% |
| 3589630 | 243.4.1.4 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DUF1292 | 0.61 | 52.0 | 4.39e-01 | 100.0% | 56.7% |
| 4514268 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.61 | 47.0 | 3.97e-01 | 84.9% | 58.4% |
| 5025077 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.61 | 52.0 | 5.05e-01 | 100.0% | 86.7% |
| 4940372 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.60 | 45.0 | 4.15e-01 | 83.0% | 64.3% |
| 3770804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 50.0 | 4.40e-01 | 100.0% | 67.1% |
| 4945674 | 2.1.1.252 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C | 0.59 | 45.0 | 4.14e-01 | 83.0% | 64.3% |
| 3866907 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 50.0 | 4.36e-01 | 100.0% | 67.1% |
| 3232470 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 45.0 | 2.82e-01 | 100.0% | 14.4% |
| 3591211 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 48.0 | 4.34e-01 | 100.0% | 68.8% |
| 4024568 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.58 | 49.0 | 3.18e-01 | 100.0% | 20.4% |
| 4023011 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.57 | 49.0 | 3.26e-01 | 100.0% | 42.6% |
| 3581460 | 2007.2.3.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK | 0.57 | 45.0 | 2.83e-01 | 88.7% | 35.4% |
| 3479868 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 43.0 | 3.76e-01 | 88.7% | 54.4% |
| 3628462 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 38.0 | 3.72e-01 | 71.7% | 71.7% |
| 3721552 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.56 | 49.0 | 2.80e-01 | 100.0% | 21.7% |
| 119433 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.56 | 47.0 | 3.44e-01 | 100.0% | 62.6% |
| 4009799 | 274.1.1.4 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI | 0.56 | 40.0 | 3.18e-01 | 75.5% | 69.5% |
| 3284081 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.56 | 47.0 | 3.24e-01 | 98.1% | 55.9% |
| 3978190 | 375.1.1.311 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1062 | 0.56 | 42.0 | 3.73e-01 | 100.0% | 53.3% |
| 3393084 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 45.0 | 3.95e-01 | 100.0% | 60.0% |
| 3513463 | 283.2.1.10 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › PF29514 | 0.55 | 45.0 | 3.46e-01 | 92.5% | 87.7% |
| 3936087 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.55 | 43.0 | 2.70e-01 | 88.7% | 35.8% |
| 828 | 9.1.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin | 0.55 | 44.0 | 3.39e-01 | 94.3% | 60.6% |
| 3615163 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 43.0 | 3.58e-01 | 94.3% | 65.4% |
| 3726361 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 46.0 | 3.94e-01 | 100.0% | 64.4% |
| 3194506 | 220.1.1.201 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 | 0.53 | 44.0 | 3.61e-01 | 100.0% | 62.7% |
| 3862290 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 36.0 | 2.65e-01 | 71.7% | 24.5% |
| 3444970 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.52 | 37.0 | 2.93e-01 | 86.8% | 32.3% |
| 4033820 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 3.58e-01 | 100.0% | 55.2% |
| 3941521 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.51 | 38.0 | 3.11e-01 | 84.9% | 95.6% |
| 3486847 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.51 | 43.0 | 3.52e-01 | 100.0% | 50.5% |
| 3773011 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.75e-01 | 100.0% | 67.1% |