Back to structures

ON548418.1__UUV46158.1__X__00017

Bact-Vir

ON548418.1__UUV46158.1__X__00017

Identity

Accession:
ON548418 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-116
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 53.0 6.12e-01 72.8% 82.1%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 56.0 5.16e-01 75.4% 54.3%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 56.0 5.04e-01 78.1% 51.3%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 55.0 6.47e-01 78.9% 92.7%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 6.46e-01 79.8% 91.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 6.03e-01 74.6% 78.6%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 54.0 5.47e-01 72.8% 67.9%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 6.30e-01 82.5% 92.0%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 6.05e-01 80.7% 86.8%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.84e-01 72.8% 82.3%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.65e-01 73.7% 75.5%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 6.14e-01 72.8% 91.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.78 54.0 6.29e-01 72.8% 98.8%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 6.17e-01 73.7% 94.1%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 5.62e-01 73.7% 77.7%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 49.0 5.95e-01 80.7% 97.3%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 6.17e-01 85.1% 97.6%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 5.21e-01 78.1% 67.5%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.84e-01 73.7% 94.0%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.55e-01 72.8% 92.4%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.54e-01 84.2% 92.3%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.93e-01 83.3% 91.2%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.66e-01 75.4% 83.5%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.37e-01 78.9% 74.4%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 5.84e-01 78.1% 97.6%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 48.0 5.37e-01 71.9% 85.2%
3l4gC01 3.30.1370.240 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.73 50.0 5.20e-01 71.9% 76.2%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.12e-01 72.8% 71.3%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 47.0 5.34e-01 71.9% 89.3%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.66e-01 73.7% 94.4%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.97e-01 84.2% 95.1%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.44e-01 71.9% 90.1%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.22e-01 72.8% 82.4%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.86e-01 74.6% 85.0%
2ns0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 5.47e-01 79.8% 95.2%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.69 50.0 3.95e-01 74.6% 87.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.89e-01 73.7% 73.3%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 5.09e-01 83.3% 94.3%
1xb4B01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.64 45.0 4.67e-01 71.1% 77.9%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.64 45.0 5.15e-01 74.6% 97.6%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 42.0 4.82e-01 71.9% 92.8%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.62 41.0 4.55e-01 72.8% 85.4%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 36.0 2.96e-01 75.4% 32.2%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.42e-01 80.7% 75.7%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.68e-01 78.9% 100.0%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.55 38.0 4.22e-01 88.6% 93.1%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.53 37.0 4.06e-01 75.4% 93.2%
1if1B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.85e-01 75.4% 100.0%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994432 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 60.0 6.23e-01 74.6% 75.2%
4940261 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.85 52.0 6.63e-01 75.4% 100.0%
5041543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.84 55.0 5.09e-01 73.7% 54.3%
4547759 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.84 49.0 6.33e-01 75.4% 97.1%
4999532 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.83 63.0 4.80e-01 78.9% 37.9%
5036586 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 57.0 6.64e-01 75.4% 95.3%
5030289 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 53.0 6.39e-01 71.9% 93.8%
5016748 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.82 53.0 5.22e-01 72.8% 62.5%
5018390 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 54.0 5.36e-01 73.7% 64.7%
5051534 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 60.0 4.99e-01 80.7% 47.0%
5069274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 54.0 5.41e-01 74.6% 67.0%
4965874 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.81 52.0 4.94e-01 72.8% 56.0%
4997952 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 57.0 6.53e-01 71.9% 97.6%
4999546 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 58.0 6.31e-01 76.3% 88.4%
4943782 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 55.0 5.44e-01 72.8% 66.7%
4976186 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 61.0 5.39e-01 78.9% 57.4%
5050259 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 56.0 4.66e-01 73.7% 44.3%
5035685 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 57.0 5.50e-01 73.7% 66.9%
4983791 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.79 58.0 5.53e-01 78.9% 66.2%
5065027 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.79 59.0 5.34e-01 78.1% 60.0%
4978826 873.1.1.18 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 0.79 52.0 4.13e-01 72.8% 35.2%
3587894 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.78 54.0 4.55e-01 71.9% 45.7%
3963083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 5.16e-01 71.9% 60.7%
4928997 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 58.0 6.46e-01 76.3% 100.0%
3941591 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 56.0 6.52e-01 75.4% 100.0%
None 0.78 53.0 3.64e-01 75.4% 21.9%
5045098 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 57.0 6.36e-01 75.4% 100.0%
3278037 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 57.0 4.70e-01 77.2% 44.6%
5052844 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.77 57.0 4.61e-01 82.5% 42.4%
4976218 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 54.0 5.34e-01 73.7% 68.3%
3330019 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.77 58.0 5.83e-01 78.1% 77.4%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 57.0 4.74e-01 78.1% 47.8%
None 0.77 50.0 5.02e-01 72.8% 65.2%
4959599 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 54.0 5.48e-01 73.7% 72.8%
4625648 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 53.0 5.50e-01 72.8% 74.3%
3602364 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.76 56.0 6.24e-01 74.6% 95.6%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 56.0 4.66e-01 75.4% 47.0%
3285760 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 55.0 4.64e-01 73.7% 47.8%
4978533 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 55.0 5.14e-01 73.7% 62.2%
5075560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 5.28e-01 80.7% 69.7%
3956796 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.76 55.0 4.56e-01 73.7% 62.7%
5075771 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 53.0 5.44e-01 72.8% 73.6%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 56.0 4.70e-01 75.4% 47.8%
3625937 101.1.2.216 alpha arrays › HTH › HTH › winged helix domain › CED4_WHD 0.76 59.0 5.35e-01 81.6% 65.3%
3285723 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 54.0 4.56e-01 72.8% 48.0%
4978412 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 54.0 4.60e-01 74.6% 48.0%
3286277 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 56.0 4.70e-01 78.1% 48.3%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 52.0 6.04e-01 79.8% 96.5%
3586609 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.75 50.0 4.93e-01 71.9% 64.7%
4947850 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 5.50e-01 72.8% 89.5%
5062171 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 52.0 4.68e-01 71.9% 56.0%
5045983 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.74 57.0 6.10e-01 79.8% 95.0%
4933184 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 54.0 5.79e-01 80.7% 86.0%
4934296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 51.0 5.29e-01 72.8% 76.2%
3661331 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 57.0 4.93e-01 81.6% 58.8%
3279209 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 52.0 4.49e-01 73.7% 48.6%
4980445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 52.0 4.72e-01 72.8% 66.2%
4947062 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 5.93e-01 81.6% 92.6%
5069500 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.62e-01 72.8% 56.7%
5062758 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 4.55e-01 77.2% 86.1%
5058727 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.68e-01 72.8% 58.6%
5070663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.69e-01 71.9% 60.0%
5062314 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.60e-01 72.8% 57.3%
5025804 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 58.0 5.35e-01 84.2% 72.9%
4969948 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.57e-01 82.5% 83.8%
5076338 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 54.0 4.48e-01 78.1% 50.8%
5069995 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 57.0 4.43e-01 83.3% 44.4%
3187043 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 52.0 5.83e-01 77.2% 98.9%
3700237 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 4.77e-01 72.8% 69.2%
3433965 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 55.0 5.13e-01 82.5% 72.9%
3827266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 5.01e-01 81.6% 67.6%
4983992 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 56.0 4.95e-01 82.5% 63.2%
4401786 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.69 53.0 5.54e-01 78.9% 85.7%
4997255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.71e-01 81.6% 93.0%
4948099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.50e-01 81.6% 93.6%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 54.0 5.32e-01 81.6% 81.7%
4990676 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 54.0 5.52e-01 81.6% 90.0%
2609 101.1.2.38 alpha arrays › HTH › HTH › winged helix domain › RTP 0.69 49.0 4.89e-01 73.7% 73.3%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 52.0 5.33e-01 78.9% 89.1%
4012436 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.69 50.0 5.44e-01 75.4% 94.7%
3443063 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 52.0 4.53e-01 81.6% 57.2%
4954006 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.68 51.0 5.51e-01 77.2% 98.9%
4927759 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.68 55.0 4.81e-01 83.3% 61.3%
4992977 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 55.0 5.40e-01 84.2% 92.5%
4004118 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.68 55.0 4.55e-01 83.3% 95.7%
3735293 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.68 49.0 3.69e-01 74.6% 36.2%
3316941 101.1.2.147 alpha arrays › HTH › HTH › winged helix domain › ORC4_C 0.67 52.0 5.26e-01 81.6% 85.2%
5014314 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.67 50.0 5.52e-01 80.7% 98.9%
4999601 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 5.22e-01 78.1% 89.5%
4977541 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 53.0 4.40e-01 84.2% 78.5%
4953881 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.64 49.0 5.00e-01 79.8% 90.9%
5053363 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 4.47e-01 78.1% 75.7%
3455640 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.64 46.0 5.09e-01 75.4% 97.8%
3468223 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.63 56.0 3.89e-01 93.9% 53.6%
D2 high residues 121-271
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13814.13 best Replic_Relax 30.7 4.50e-07 72.2% 49.5%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xmxA02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.75 60.0 6.11e-01 96.7% 85.9%
2ewfA03 3.40.91.50 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.68 64.0 5.51e-01 100.0% 69.8%
3lucA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 48.0 5.19e-01 98.7% 86.7%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 49.0 5.23e-01 98.7% 85.8%
2ziuB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 53.0 5.40e-01 97.4% 85.2%
2fokA03 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.67 62.0 5.88e-01 100.0% 87.4%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 41.0 4.76e-01 98.7% 85.5%
4bxoA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 49.0 5.10e-01 98.0% 85.9%
3gdwB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.63 43.0 4.47e-01 98.7% 75.4%
2bd0A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 54.0 4.69e-01 98.7% 93.6%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 39.0 3.93e-01 88.7% 66.7%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.59 40.0 4.21e-01 98.7% 76.6%
2csuA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.58 53.0 5.17e-01 99.3% 89.2%
1wv9A00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.58 32.0 4.17e-01 84.8% 95.4%
3icsA03 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.58 34.0 4.03e-01 86.8% 85.3%
1iy8A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.34e-01 98.7% 89.5%
2l5oA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 36.0 3.70e-01 87.4% 63.3%
4xymC03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.57 50.0 4.86e-01 96.7% 84.6%
3rkuA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 50.0 4.15e-01 96.7% 84.7%
1yt8A02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.57 36.0 4.14e-01 88.1% 88.0%
2eg3A02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.56 32.0 3.67e-01 94.0% 74.8%
4nimA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.26e-01 96.7% 83.7%
2k0zA00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.56 33.0 3.83e-01 87.4% 80.0%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 3.59e-01 83.4% 100.0%
3efoB04 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.56 50.0 4.25e-01 98.7% 96.7%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 32.0 3.21e-01 94.7% 54.6%
2yhaA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 44.0 3.80e-01 83.4% 67.7%
4p4gA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 41.0 4.31e-01 93.4% 85.6%
1j5xA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 37.0 3.77e-01 98.0% 68.7%
2qezE03 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 47.0 3.77e-01 92.1% 81.9%
4a2bA03 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 34.0 4.18e-01 86.8% 100.0%
3gu3A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 44.0 4.33e-01 94.7% 79.6%
3kcmF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 33.0 3.49e-01 86.8% 68.1%
2pjdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 46.0 4.41e-01 95.4% 89.3%
7otsB01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 44.0 3.67e-01 98.7% 85.1%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5053905 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.76 49.0 5.92e-01 85.4% 98.0%
1030945 2008.1.1.34 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc 0.75 62.0 6.54e-01 100.0% 97.0%
3961975 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.75 38.0 4.37e-01 76.8% 65.2%
5042516 2008.1.1.235 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26618 0.75 57.0 6.24e-01 92.7% 96.0%
4934034 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.74 55.0 4.41e-01 90.1% 40.4%
4926927 2003.1.1.76 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C 0.74 38.0 3.60e-01 74.8% 41.9%
3603146 2008.1.1.95 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII 0.70 63.0 5.06e-01 100.0% 51.2%
4948814 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.69 57.0 5.64e-01 93.4% 83.1%
3999635 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.67 49.0 5.17e-01 98.7% 83.7%
3576102 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.66 48.0 4.72e-01 98.7% 70.0%
4771626 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.66 41.0 4.76e-01 98.7% 85.5%
3616325 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.66 49.0 4.80e-01 98.7% 71.9%
5072639 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 61.0 6.02e-01 100.0% 95.0%
3586624 7590.1.1.6 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid 0.65 48.0 4.68e-01 100.0% 69.7%
4942551 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.64 47.0 4.18e-01 86.8% 52.7%
4950766 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.63 58.0 5.11e-01 99.3% 80.9%
5072779 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.63 42.0 4.65e-01 97.4% 85.7%
3594469 2007.2.5.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase 0.61 37.0 4.20e-01 100.0% 78.3%
3937265 7590.1.1.6 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid 0.61 48.0 4.61e-01 98.7% 72.4%
3957136 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.61 44.0 4.97e-01 100.0% 99.1%
4995858 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.61 42.0 4.54e-01 99.3% 84.0%
4002537 7590.1.1.9 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › PF29016 0.61 47.0 4.39e-01 100.0% 65.9%
4028354 2008.1.1.97 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 0.60 49.0 4.02e-01 86.8% 70.1%
3673088 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.60 42.0 4.02e-01 72.8% 62.4%
3473663 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.59 43.0 3.36e-01 74.8% 44.6%
3271719 2003.1.5.408 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › KR 0.59 53.0 3.67e-01 98.0% 43.7%
5073584 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.59 42.0 4.44e-01 100.0% 84.6%
284082 2007.2.5.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase 0.59 32.0 4.17e-01 84.1% 94.2%
4084414 2008.1.1.6 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.58 49.0 5.09e-01 96.0% 96.4%
4009644 2008.1.1.160 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27151 0.58 49.0 4.71e-01 91.4% 80.3%
3282240 2007.2.5.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.58 36.0 4.29e-01 88.1% 93.0%
5053328 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.58 52.0 5.03e-01 96.7% 90.9%
5050245 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.57 39.0 4.29e-01 96.7% 86.7%
3972575 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 52.0 4.27e-01 98.7% 81.1%
4971932 2007.1.5.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.57 43.0 4.47e-01 100.0% 87.4%
3712968 2485.1.1.12 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.56 41.0 3.66e-01 89.4% 54.4%
3934461 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.56 49.0 3.84e-01 96.0% 75.8%
3855818 2006.1.6.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Sec23_trunk 0.56 50.0 4.24e-01 98.0% 94.4%
3976411 2008.1.1.58 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF3799 0.56 45.0 3.83e-01 86.8% 68.9%
9099 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.55 48.0 4.17e-01 96.7% 92.1%
4947742 2484.1.1.55 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom 0.55 39.0 4.18e-01 83.4% 83.1%
3962732 2496.1.1.4 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › SpoIIAA-like 0.54 41.0 4.52e-01 99.3% 100.0%
3191387 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.54 49.0 3.85e-01 100.0% 93.4%
3958440 2003.1.1.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH 0.54 44.0 3.92e-01 95.4% 61.9%
5011226 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.54 42.0 3.94e-01 100.0% 68.3%
3607243 2007.2.5.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese 0.54 38.0 4.01e-01 99.3% 80.0%
4103907 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.53 48.0 3.65e-01 100.0% 58.1%
4969957 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.52 42.0 4.22e-01 93.4% 84.7%
4028846 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 36.0 3.93e-01 72.2% 86.0%
3689053 2484.1.1.39 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Fumble 0.51 39.0 3.93e-01 78.8% 93.3%
3386534 2003.1.5.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F 0.50 43.0 3.55e-01 92.1% 96.0%