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ON548419.1__UUV46461.1__X__00072

Bact-Vir

ON548419.1__UUV46461.1__X__00072

Identity

Accession:
ON548419 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-106
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.76 51.0 5.79e-01 96.1% 90.9%
4qucA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 34.0 4.55e-01 85.3% 92.9%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.61 40.0 3.91e-01 78.4% 61.5%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 34.0 3.87e-01 82.4% 75.7%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 41.0 3.48e-01 73.5% 84.0%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.57 42.0 3.11e-01 78.4% 82.2%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 41.0 2.97e-01 76.5% 81.2%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 4.15e-01 79.4% 78.0%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 41.0 3.04e-01 79.4% 74.8%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 35.0 3.08e-01 100.0% 46.3%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 39.0 2.87e-01 81.4% 41.5%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
165654 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.74 46.0 5.33e-01 95.1% 86.5%
3645842 4.1.1.162 beta barrels › SH3 › SH3 › SH3 › DUF502 0.72 50.0 5.62e-01 78.4% 92.5%
3934278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 47.0 4.52e-01 76.5% 60.0%
3218475 4.1.1.390 beta barrels › SH3 › SH3 › SH3 › PF29855 0.69 48.0 4.53e-01 81.4% 60.0%
3232582 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 42.0 4.40e-01 92.2% 73.7%
3876680 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.62 43.0 4.38e-01 80.4% 72.0%
4863266 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 34.0 4.03e-01 70.6% 81.5%
4022025 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.61 44.0 3.90e-01 75.5% 58.6%
3188394 4.8.1.22 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.60 45.0 4.31e-01 79.4% 81.7%
3394789 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.44e-01 91.2% 76.4%
5029914 252.2.1.0 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.58 31.0 3.92e-01 92.2% 92.7%
3212053 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 42.0 3.01e-01 78.4% 76.2%
3511007 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.57 47.0 4.45e-01 89.2% 92.5%
3901130 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 40.0 2.92e-01 75.5% 74.6%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.56 39.0 3.86e-01 91.2% 67.3%
3484700 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.56 39.0 3.96e-01 79.4% 74.0%
3479794 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.56 41.0 2.95e-01 78.4% 70.6%
3429751 708.1.1.2 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY 0.56 31.0 3.96e-01 77.5% 95.0%
4272564 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.55 44.0 4.33e-01 99.0% 79.6%
3842363 1.1.5.76 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.55 40.0 3.92e-01 98.0% 70.0%
3770803 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.55 39.0 3.88e-01 98.0% 70.0%
3250024 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 41.0 3.06e-01 82.4% 45.6%
2755606 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.53 47.0 3.58e-01 96.1% 45.7%
3930110 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 39.0 2.88e-01 79.4% 68.7%
4357452 4.8.1.29 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C 0.53 35.0 3.67e-01 71.6% 73.7%
3562015 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 39.0 2.89e-01 82.4% 39.3%
3636717 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 39.0 2.80e-01 82.4% 42.7%
None 0.51 39.0 2.86e-01 82.4% 39.7%
3934999 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 39.0 2.81e-01 82.4% 40.8%
None 0.51 39.0 2.81e-01 82.4% 38.7%
D2 high residues 120-156
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wpbG01 1.10.287.680 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.96 80.0 6.90e-01 89.2% 64.8%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.96 87.0 7.95e-01 100.0% 77.1%
1o9gA02 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.95 85.0 8.09e-01 100.0% 86.0%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.93 84.0 7.17e-01 100.0% 63.8%
3k7xA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.93 83.0 4.70e-01 100.0% 11.0%
3vw5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.92 80.0 4.52e-01 100.0% 9.8%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.91 79.0 6.38e-01 100.0% 91.5%
3gt5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.89 76.0 4.31e-01 100.0% 9.7%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.89 76.0 6.17e-01 100.0% 52.1%
4fppB01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.88 76.0 6.17e-01 100.0% 57.7%
4mu9B00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.88 76.0 4.31e-01 100.0% 14.5%
3gonA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.88 74.0 5.01e-01 97.3% 32.1%
1aueB00 1.20.120.150 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain 0.87 74.0 5.52e-01 100.0% 40.4%
1dq3A02 3.30.160.90 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.86 66.0 5.14e-01 83.8% 100.0%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.85 72.0 5.32e-01 100.0% 37.8%
2gz6A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.85 72.0 4.08e-01 100.0% 14.5%
2wj9B00 3.30.70.3580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein 0.84 70.0 4.70e-01 100.0% 25.5%
5ffdA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.84 70.0 4.78e-01 100.0% 29.9%
1e52A00 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.83 69.0 6.16e-01 100.0% 78.6%
3rkoG00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.83 69.0 5.15e-01 100.0% 37.0%
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.82 68.0 5.37e-01 100.0% 45.2%
8e9gK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 68.0 5.24e-01 100.0% 41.8%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 66.0 4.12e-01 100.0% 16.7%
6qs7C01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 67.0 4.65e-01 100.0% 28.0%
2kc7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 66.0 4.93e-01 97.3% 36.4%
3uj9A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.80 67.0 4.03e-01 100.0% 15.9%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.79 63.0 4.17e-01 100.0% 21.1%
4ecgA00 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.79 63.0 3.66e-01 100.0% 10.1%
1ucuA01 6.10.280.190 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 65.0 5.44e-01 100.0% 54.4%
4w8pA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.75 56.0 4.10e-01 100.0% 28.5%
3efeC00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.75 61.0 3.75e-01 91.9% 85.9%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.71 54.0 3.95e-01 100.0% 29.0%
1cpyA02 1.10.287.410 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 55.0 4.64e-01 97.3% 54.2%
2j5iA02 6.10.250.2850 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.70 56.0 5.57e-01 100.0% 92.1%
2yxyA01 1.10.287.880 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain 0.69 52.0 5.04e-01 100.0% 74.0%
2jqtA00 1.20.1280.40 Mainly Alpha › Up-down Bundle › Monooxygenase › HHA 0.69 54.0 4.96e-01 100.0% 64.9%
3g36B00 1.20.890.10 Mainly Alpha › Up-down Bundle › cAMP-dependent Protein Kinase, Chain A › cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain 0.67 49.0 4.42e-01 78.4% 62.7%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.66 53.0 3.57e-01 100.0% 21.6%
1m4rB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.66 53.0 3.77e-01 100.0% 26.2%
2hw5A02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.66 51.0 4.70e-01 100.0% 73.7%
3q1pA01 6.10.250.1120 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.65 46.0 4.55e-01 75.7% 100.0%
5u1xA01 1.10.287.940 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel 0.65 54.0 5.08e-01 97.3% 95.7%
3swxA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.64 50.0 4.59e-01 100.0% 63.8%
1kaeA03 1.20.5.1300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.60 43.0 4.08e-01 94.6% 63.6%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5008319 605.1.1.10 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › SPOB_a 0.99 93.0 7.42e-01 100.0% 56.9%
5047297 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.98 91.0 7.76e-01 100.0% 67.3%
5048408 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.96 87.0 7.54e-01 100.0% 67.3%
5001984 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.95 85.0 7.67e-01 100.0% 74.0%
3821523 5069.1.3.122 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PLAC8 0.95 85.0 5.82e-01 100.0% 32.2%
3242356 605.4.1.19 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › PF30187 0.94 84.0 6.19e-01 100.0% 41.1%
4945192 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.94 85.0 7.12e-01 100.0% 61.7%
5002089 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.94 83.0 4.77e-01 100.0% 11.7%
4997951 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.93 83.0 7.15e-01 97.3% 65.5%
1108845 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.92 81.0 7.43e-01 100.0% 77.1%
3488077 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.92 80.0 5.88e-01 100.0% 55.8%
2847627 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.92 79.0 7.98e-01 97.3% 100.0%
4201121 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.91 79.0 6.75e-01 100.0% 61.7%
3199341 192.8.1.32 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Pkr1 0.90 78.0 6.20e-01 100.0% 49.3%
1203190 192.3.1.1 alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Sod_Fe_N 0.88 75.0 5.59e-01 100.0% 39.8%
3360875 7015.1.1.4 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › PLAC8 0.87 73.0 5.18e-01 100.0% 32.2%
3608854 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.84 68.0 4.19e-01 100.0% 15.7%
3706270 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.83 71.0 4.22e-01 100.0% 14.1%
4958320 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.82 69.0 4.58e-01 100.0% 86.5%
3878643 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.80 65.0 5.15e-01 100.0% 43.5%
5032313 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.77 66.0 4.77e-01 100.0% 33.6%
2649358 1107.1.1.1 alpha bundles › Pilin › Pilin › Pilin › TraA 0.75 64.0 5.35e-01 100.0% 57.6%
3699790 541.1.1.0 alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit 0.72 54.0 5.28e-01 81.1% 80.0%