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URC17182.1
Arc-VirON548428__URC17182.1__X__00005
Identity
- Accession:
- ON548428 ↗
- Protein ID:
- URC17182.1 ↗
- Kingdom:
- archaea
Quality
82.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-45
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.78 | 55.0 | 4.85e-01 | 75.0% | 53.3% |
| 6hyyA02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.74 | 52.0 | 4.51e-01 | 75.0% | 47.6% |
| 3rqtA02 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.73 | 51.0 | 3.25e-01 | 77.5% | 15.5% |
| 3k7dA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.72 | 60.0 | 4.26e-01 | 100.0% | 39.6% |
| 1rsoB00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.71 | 51.0 | 4.61e-01 | 77.5% | 58.9% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 47.0 | 4.35e-01 | 70.0% | 79.2% |
| 3cqyB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.70 | 49.0 | 3.26e-01 | 80.0% | 17.4% |
| 1kw4A00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 55.0 | 4.78e-01 | 100.0% | 87.1% |
| 2uvaG13 | 6.10.140.1400 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 48.0 | 4.95e-01 | 87.5% | 86.5% |
| 4e21B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 53.0 | 3.72e-01 | 100.0% | 35.8% |
| 1hr5A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.61 | 44.0 | 4.17e-01 | 77.5% | 70.8% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 49.0 | 4.22e-01 | 100.0% | 74.6% |
| 3ghaA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 48.0 | 3.12e-01 | 95.0% | 98.9% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 41.0 | 3.46e-01 | 82.5% | 44.9% |
| 2lruA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 41.0 | 3.28e-01 | 90.0% | 71.4% |
| 4bvxA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 38.0 | 3.01e-01 | 80.0% | 30.5% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 43.0 | 3.30e-01 | 95.0% | 72.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3265542 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 53.0 | 5.21e-01 | 77.5% | 72.1% |
| 3170154 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 50.0 | 3.38e-01 | 80.0% | 19.4% |
| 4205724 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.70 | 45.0 | 3.03e-01 | 75.0% | 17.4% |
| 3979567 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.67 | 56.0 | 4.43e-01 | 100.0% | 53.3% |
| 4681823 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.67 | 44.0 | 3.24e-01 | 70.0% | 27.0% |
| 3246204 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 49.0 | 4.98e-01 | 97.5% | 97.5% |
| 3220585 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.59 | 43.0 | 3.89e-01 | 77.5% | 61.8% |
| 3208982 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 48.0 | 4.63e-01 | 95.0% | 82.2% |
| 1906415 | 3106.1.1.0 ↗ | 0.59 | 43.0 | 3.96e-01 | 80.0% | 59.3% | |
| 3834548 | 101.1.3.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 | 0.58 | 51.0 | 4.35e-01 | 100.0% | 64.6% |
| 3751123 | 102.4.1.0 ↗ | alpha arrays › HhH/H2TH › YozE-like › YozE-like | 0.57 | 49.0 | 4.09e-01 | 97.5% | 55.7% |
| 3556827 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.57 | 46.0 | 3.89e-01 | 97.5% | 52.9% |
| 4102625 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.57 | 49.0 | 4.35e-01 | 100.0% | 73.3% |
| 4017824 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.54 | 45.0 | 3.69e-01 | 92.5% | 81.3% |
| 3228081 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 40.0 | 3.74e-01 | 95.0% | 70.9% |
| 3796255 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 35.0 | 3.46e-01 | 80.0% | 73.3% |