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URC17204.1

Arc-Vir

ON548428__URC17204.1__X__00027

Identity

Accession:: ON548428 ↗
Protein ID:: URC17204.1 ↗
Kingdom:: archaea

Quality

78.2 mean pLDDT

Taxonomy

Lokiarchaeota_virus_Fenrir_Meg22_1214

TaxID: 2946035

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 136-243

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00127__D196-310

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yu0A02	2.80.20.10	Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein	0.74	62.0	5.58e-01	89.8%	77.4%
3otpA01	2.40.10.120	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.54	41.0	3.32e-01	79.6%	78.8%
4c92C00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.52	28.0	3.17e-01	80.6%	68.4%
1wfmA00	2.60.40.150	Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain	0.51	44.0	4.06e-01	95.4%	81.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5038875	4166.1.1.0 ↗	beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like	0.77	69.0	6.76e-01	93.5%	87.8%
2390431	4166.1.1.1 ↗	beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › T6SS_VasE	0.71	65.0	5.38e-01	100.0%	82.8%
3891071	382.1.1.0 ↗	few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like	0.51	34.0	3.85e-01	77.8%	98.6%

D2 high residues 263-416

PDB

Domain cluster: rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00808__D1309-1457

D3 high residues 697-815

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00061__D46-171

D4 medium residues 1-95

PDB

D5 medium residues 615-674

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3gw6F01	4.10.1090.10	Few Secondary Structures › Irregular › Endosialidase, domain 4 › Endosialidase, domain 4	0.61	51.0	4.53e-01	100.0%	86.0%
3oajA02	3.10.180.10	Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1	0.59	40.0	3.09e-01	71.7%	77.8%
5jozA01	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.57	39.0	2.50e-01	71.7%	55.7%
3cjeA00	3.30.300.20	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain	0.56	34.0	2.58e-01	78.3%	24.7%
4rbnA01	3.10.450.330	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.54	44.0	3.50e-01	93.3%	70.5%
1crmA00	3.10.200.10	Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase	0.53	40.0	2.77e-01	88.3%	80.1%
6hoxA01	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.53	39.0	2.67e-01	81.7%	53.0%
4glaC00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.52	36.0	3.20e-01	73.3%	74.2%
3gkeA01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.52	35.0	2.78e-01	70.0%	80.0%
2jv8A00	3.30.1880.10	Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like	0.51	33.0	3.13e-01	75.0%	53.4%
1t6aA02	3.30.310.120	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein	0.50	39.0	3.76e-01	95.0%	92.3%
3nm6B00	3.40.50.1580	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain	0.50	40.0	2.80e-01	91.7%	45.9%
3wa5B00	2.60.120.1690	Mainly Beta › Sandwich › Jelly Rolls ›	0.50	37.0	3.01e-01	81.7%	85.5%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3266673	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.56	38.0	2.45e-01	73.3%	40.6%
3992808	5.1.4.7 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1	0.55	40.0	2.64e-01	80.0%	29.8%
1746334	79.1.1.12 ↗	beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp138_C	0.54	46.0	4.12e-01	100.0%	81.1%
3166373	79.1.1.0 ↗	beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain	0.54	44.0	4.11e-01	100.0%	76.2%
3736787	331.3.1.2 ↗	a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A	0.51	35.0	2.31e-01	71.7%	77.2%
3368395	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.50	39.0	2.67e-01	100.0%	98.1%