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URC17373.1

Arc-Vir

ON548429__URC17373.1__X__00069

Identity

Accession:
ON548429 ↗
Protein ID:
URC17373.1 ↗
Kingdom:
archaea

Quality

64.9 mean pLDDT

Taxonomy

Helarchaeota_virus_Nidhogg_Meg22_1214

TaxID: 2946033

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-95
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dvoA00 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.62 52.0 4.23e-01 93.5% 61.2%
3no6A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.59 40.0 2.91e-01 71.4% 42.1%
2be4A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 40.0 3.86e-01 72.7% 93.2%
2d2sA01 1.20.58.1210 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain 0.54 35.0 3.12e-01 81.8% 44.0%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.34e-01 93.5% 82.6%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 4.28e-01 93.5% 95.1%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 4.23e-01 90.9% 100.0%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 39.0 4.04e-01 87.0% 91.7%
7ce1A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 33.0 3.75e-01 79.2% 98.1%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.50 31.0 3.70e-01 72.7% 98.0%
4uobA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.50 42.0 3.71e-01 100.0% 64.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3658468 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 43.0 4.74e-01 87.0% 93.3%
4005722 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.63 46.0 4.31e-01 85.7% 63.2%
4074434 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.61 44.0 4.42e-01 84.4% 73.8%
4044177 505.1.1.1 ↗ alpha arrays › Repressor of bacterial conjugation FinO › Repressor of bacterial conjugation FinO › Repressor of bacterial conjugation FinO › ProQ 0.61 49.0 4.18e-01 88.3% 68.5%
5049207 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 4.83e-01 92.2% 96.9%
4482310 101.35.1.4 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.60 39.0 4.37e-01 90.9% 94.5%
4928210 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 4.81e-01 97.4% 96.8%
3294347 101.1.17.20 ↗ alpha arrays › HTH › HTH › FF domain › DUF4378 0.57 47.0 4.11e-01 92.2% 85.8%
4932863 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.57 45.0 4.52e-01 93.5% 85.0%
3935995 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.57 43.0 4.34e-01 85.7% 82.7%
4003475 101.1.2.166 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.56 45.0 4.25e-01 93.5% 94.0%
3927989 4133.1.1.1 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › ENT 0.56 42.0 4.07e-01 83.1% 72.2%
4953123 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.55 38.0 2.41e-01 72.7% 14.2%
3688063 101.1.1.148 ↗ alpha arrays › HTH › HTH › Three-helical HTH › EPL1 0.55 47.0 4.29e-01 96.1% 89.5%
3809136 4133.1.1.0 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like 0.54 36.0 3.88e-01 83.1% 83.1%
4456885 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.54 41.0 4.01e-01 85.7% 91.8%
3697423 192.29.1.145 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SHR3_chaperone 0.53 37.0 2.99e-01 72.7% 84.0%
3799851 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 34.0 3.79e-01 90.9% 90.9%
3169535 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.52 43.0 4.05e-01 94.8% 79.0%
5064505 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.52 45.0 3.33e-01 98.7% 80.3%
5021829 605.6.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like 0.52 35.0 3.41e-01 72.7% 61.1%
5060063 4133.1.1.0 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like 0.52 36.0 3.71e-01 84.4% 81.4%