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URC17386.1
Arc-VirON548429__URC17386.1__X__00082
Identity
- Accession:
- ON548429 ↗
- Protein ID:
- URC17386.1 ↗
- Kingdom:
- archaea
Quality
70.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-135
Domain cluster:
rep: rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00018__D59-190
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13298.13 best | LigD_N | 60.7 | 1.90e-16 | 93.3% | 81.3% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 55.0 | 4.82e-01 | 100.0% | 80.6% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 53.0 | 4.58e-01 | 99.2% | 76.4% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.59 | 53.0 | 4.75e-01 | 100.0% | 76.5% |
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 25.0 | 2.69e-01 | 72.5% | 41.5% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.57 | 51.0 | 4.53e-01 | 100.0% | 77.6% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 46.0 | 3.77e-01 | 89.2% | 91.8% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 34.0 | 3.98e-01 | 75.0% | 89.3% |
| 1iwlA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 46.0 | 4.08e-01 | 94.2% | 89.8% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 34.0 | 3.30e-01 | 81.7% | 57.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 998899 | 58.2.1.1 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N | 0.89 | 84.0 | 8.51e-01 | 100.0% | 99.2% |
| 1692496 | 58.2.1.1 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N | 0.89 | 86.0 | 7.48e-01 | 100.0% | 79.9% |
| 3689071 | 58.2.1.1 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N | 0.89 | 86.0 | 6.48e-01 | 100.0% | 51.8% |
| 3959638 | 58.2.1.0 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain | 0.85 | 81.0 | 7.54e-01 | 100.0% | 88.3% |
| 3932045 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.64 | 58.0 | 5.07e-01 | 100.0% | 74.4% |
| 3937294 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.60 | 55.0 | 4.78e-01 | 100.0% | 74.4% |
| 4638995 | 71.1.1.15 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 | 0.56 | 50.0 | 4.29e-01 | 99.2% | 90.2% |
| 3248667 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 41.0 | 3.52e-01 | 80.0% | 94.2% |
| 3952435 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 44.0 | 3.88e-01 | 88.3% | 76.4% |
| 1066273 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.53 | 34.0 | 3.30e-01 | 81.7% | 57.0% |
| 4973405 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 40.0 | 2.91e-01 | 83.3% | 76.4% |
| 5019857 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.52 | 45.0 | 3.80e-01 | 94.2% | 90.5% |
| 3962490 | 3513.1.1.4 ↗ | a+b two layers › Putative lipoprotein LppA › Putative lipoprotein LppA › Putative lipoprotein LppA › PF27220 | 0.51 | 41.0 | 3.94e-01 | 96.7% | 74.1% |
| 3832036 | 11.1.3.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › Sod_Cu | 0.51 | 41.0 | 3.75e-01 | 85.0% | 91.6% |
| 5009919 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 41.0 | 3.43e-01 | 87.5% | 71.3% |