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URC17404.1
Arc-VirON548429__URC17404.1__X__00100
Identity
- Accession:
- ON548429 ↗
- Protein ID:
- URC17404.1 ↗
- Kingdom:
- archaea
Quality
85.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-116
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 32.0 | 4.11e-01 | 91.0% | 87.5% |
| 3zpmA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.60 | 45.0 | 3.66e-01 | 78.4% | 61.6% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 34.0 | 3.25e-01 | 81.1% | 51.1% |
| 6qj2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.11e-01 | 87.4% | 88.8% |
| 3e8tA00 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.54 | 38.0 | 3.10e-01 | 72.1% | 62.5% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 48.0 | 4.07e-01 | 100.0% | 68.9% |
| 7s5oA01 | 3.50.70.20 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 | 0.53 | 40.0 | 3.77e-01 | 80.2% | 90.7% |
| 2uvaG09 | 2.40.128.700 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 44.0 | 4.36e-01 | 100.0% | 85.3% |
| 1gteA04 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 35.0 | 3.14e-01 | 100.0% | 50.3% |
| 2gtlM02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 44.0 | 3.88e-01 | 100.0% | 65.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3424115 | 5.1.3.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 | 0.59 | 40.0 | 2.80e-01 | 97.3% | 20.4% |
| 3433806 | 5.1.2.29 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1668 | 0.58 | 43.0 | 3.42e-01 | 97.3% | 38.2% |
| 3831229 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.56 | 45.0 | 2.82e-01 | 86.5% | 92.2% |
| 5077163 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.54 | 45.0 | 4.25e-01 | 90.1% | 75.6% |
| 4968231 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.54 | 41.0 | 2.82e-01 | 79.3% | 53.6% |
| 2581302 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.54 | 44.0 | 3.66e-01 | 86.5% | 76.6% |
| 3704007 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.53 | 41.0 | 3.23e-01 | 82.9% | 63.8% |
| 3604270 | 283.2.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like | 0.52 | 33.0 | 3.16e-01 | 75.7% | 54.6% |
| 3238811 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 36.0 | 2.72e-01 | 100.0% | 26.3% |
| 4157765 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.51 | 38.0 | 3.18e-01 | 76.6% | 73.5% |
| 3415405 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 46.0 | 2.99e-01 | 96.4% | 82.9% |
| 4937367 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.51 | 42.0 | 4.08e-01 | 91.9% | 90.4% |
| 3237482 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.50 | 34.0 | 3.02e-01 | 85.6% | 49.0% |