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URC17489.1

Arc-Vir

ON548430__URC17489.1__X__00008

Identity

Accession:
ON548430 ↗
Protein ID:
URC17489.1 ↗
Kingdom:
archaea

Quality

71.8 mean pLDDT

Taxonomy

Lokiarchaeota_virus_Skoll_Meg22_1214

TaxID: 2946037

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 166-228
PDB
Domain cluster: rep: IMGVR_UViG_2639762614_000001-2639762614-2640210178__D87-132
D2 medium residues 10-86
PDB
D3 medium residues 87-137
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dq3A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.81 71.0 4.87e-01 100.0% 30.5%
2lcjA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.77 68.0 4.56e-01 100.0% 40.0%
2f20A00 3.90.1680.10 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like 0.55 41.0 2.77e-01 86.3% 56.7%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 36.0 2.91e-01 76.5% 74.2%
2w9xB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 38.0 3.18e-01 80.4% 77.0%
4izeA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 40.0 2.93e-01 86.3% 29.6%
2mngA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 39.0 3.09e-01 92.2% 71.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950409 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.90 82.0 5.68e-01 100.0% 36.8%
4999893 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.83 66.0 5.00e-01 88.2% 38.6%
3518586 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.82 74.0 4.83e-01 100.0% 28.3%
5028788 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.82 71.0 5.10e-01 98.0% 35.0%
4944478 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.81 72.0 5.38e-01 98.0% 41.7%
5078549 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.80 71.0 4.95e-01 100.0% 31.9%
4971400 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 70.0 4.27e-01 100.0% 16.9%
4970868 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 68.0 5.08e-01 96.1% 39.2%
4993813 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.79 70.0 4.91e-01 100.0% 31.9%
4999896 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.77 67.0 5.00e-01 98.0% 40.0%
3571487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 4.83e-01 90.2% 87.7%
5011550 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.58 40.0 3.73e-01 74.5% 62.3%
3398906 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.57 41.0 4.10e-01 78.4% 89.1%
4943897 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.23e-01 84.3% 97.0%
3602141 2003.1.5.19 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM 0.50 37.0 2.35e-01 88.2% 47.3%