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URC17511.1

Arc-Vir

ON548430__URC17511.1__X__00030

Identity

Accession:
ON548430 ↗
Protein ID:
URC17511.1 ↗
Kingdom:
archaea

Quality

86.9 mean pLDDT

Taxonomy

Lokiarchaeota_virus_Skoll_Meg22_1214

TaxID: 2946037

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-225
PDB
Domain cluster: rep: MT764212__UXF49938.1__7841G3A2-47__00047__D131-289
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20314.4 best DUF6610 54.9 1.30e-14 94.6% 84.9%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2chrA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.70 54.0 5.71e-01 80.3% 97.5%
7xg9A01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.67 58.0 5.33e-01 91.5% 88.4%
3cyjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.67 59.0 5.83e-01 99.1% 88.6%
3lerA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 60.0 5.36e-01 95.1% 97.6%
2oztA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.65 54.0 5.64e-01 86.1% 98.5%
3ktcA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.65 61.0 5.28e-01 100.0% 87.6%
1a5aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 60.0 5.78e-01 99.1% 93.3%
1sfjB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 61.0 6.00e-01 99.1% 98.3%
4nq1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 61.0 5.49e-01 100.0% 75.9%
4n6fA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 60.0 5.82e-01 100.0% 90.5%
3px5A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.64 59.0 5.69e-01 98.7% 87.8%
2ekcB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 59.0 5.66e-01 98.7% 93.8%
6ovqA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.64 59.0 5.33e-01 99.1% 89.4%
1vliA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 60.0 5.43e-01 100.0% 82.6%
3r79A00 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.62 53.0 5.29e-01 91.9% 87.7%
4wghA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.62 58.0 5.29e-01 99.1% 86.6%
3crnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 31.0 4.02e-01 76.7% 87.6%
7pvaB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 30.0 4.09e-01 76.7% 94.1%
3ktoA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 31.0 4.09e-01 76.7% 94.3%
6ontA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 30.0 4.04e-01 76.7% 93.4%
7o62B01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 30.0 3.78e-01 99.1% 82.6%
3cfyA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 30.0 3.91e-01 76.7% 86.9%
3eqzB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 32.0 4.22e-01 99.6% 99.2%
2pl1A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 30.0 3.99e-01 76.7% 94.2%
2zj3A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.56 35.0 4.23e-01 95.5% 92.6%
5v1qB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 50.0 4.62e-01 95.1% 98.3%
7lzaA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 30.0 3.99e-01 76.7% 95.8%
4jejA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.56 50.0 4.89e-01 95.1% 91.3%
3b2nA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 30.0 4.00e-01 76.7% 96.7%
3euaA03 3.40.50.12570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 24.0 3.55e-01 70.4% 95.7%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 30.0 3.70e-01 76.7% 85.5%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.54 32.0 3.90e-01 96.4% 89.1%
4iilA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 31.0 3.85e-01 98.2% 91.2%
3knzA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 31.0 3.73e-01 98.2% 85.6%
4ml3D00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 31.0 3.94e-01 97.3% 96.9%
3cg4A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 30.0 3.79e-01 76.2% 94.4%
1c3qA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 46.0 4.23e-01 91.9% 95.4%
5cgaE00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.53 46.0 4.39e-01 91.9% 98.8%
3pukA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.52 31.0 3.92e-01 73.5% 99.2%
1ofuX00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 27.0 3.50e-01 88.8% 93.2%
3pfnD01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.50 29.0 3.43e-01 97.3% 80.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3939161 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.69 61.0 4.84e-01 93.7% 77.3%
None — 0.67 63.0 5.81e-01 100.0% 91.0%
139718 2002.1.1.15 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.66 61.0 5.81e-01 99.1% 93.1%
3003998 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 60.0 6.04e-01 98.2% 99.6%
3183572 2002.1.1.15 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.65 59.0 5.42e-01 97.3% 85.9%
5054246 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 60.0 5.77e-01 100.0% 98.0%
3330856 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.64 59.0 5.09e-01 99.1% 85.1%
5067003 2002.1.1.236 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.64 50.0 5.36e-01 100.0% 95.3%
4556948 2002.1.1.15 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.64 58.0 5.59e-01 97.3% 94.0%
3593401 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 58.0 5.32e-01 99.1% 86.3%
1169864 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.60 50.0 5.02e-01 87.4% 90.0%
4951370 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.59 31.0 4.20e-01 76.7% 94.2%
2554683 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.59 50.0 5.14e-01 88.3% 94.3%
3507027 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 53.0 4.16e-01 99.6% 53.3%
4991319 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.57 48.0 4.87e-01 87.4% 93.5%
4972512 2002.1.1.77 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 0.57 49.0 4.84e-01 100.0% 86.8%
4958130 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.56 52.0 4.48e-01 99.1% 87.8%
4955570 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.56 50.0 4.88e-01 96.0% 99.2%
4139428 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.56 30.0 4.07e-01 99.6% 97.5%
4984338 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.56 32.0 3.96e-01 76.7% 89.6%
4215872 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.55 30.0 3.76e-01 76.7% 85.9%
3251448 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 46.0 3.67e-01 89.7% 89.8%
4588727 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.54 35.0 3.77e-01 91.5% 74.7%
3987364 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.54 31.0 3.85e-01 76.2% 90.0%
4933348 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.53 35.0 3.75e-01 91.5% 76.3%
1720143 2007.12.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Beta-D-glucan exohydrolase, C-terminal domain › Beta-D-glucan exohydrolase, C-terminal domain 0.53 35.0 4.08e-01 73.5% 93.7%
4547621 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.52 34.0 3.82e-01 91.5% 82.3%
3232545 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.52 39.0 3.90e-01 74.9% 88.4%
3945699 2499.2.1.6 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 0.50 38.0 3.76e-01 75.8% 98.3%