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URC17513.1

Arc-Vir

ON548430__URC17513.1__X__00032

Identity

Accession:
ON548430 ↗
Protein ID:
URC17513.1 ↗
Kingdom:
archaea

Quality

92.8 mean pLDDT

Taxonomy

Lokiarchaeota_virus_Skoll_Meg22_1214

TaxID: 2946037

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 213-274
PDB
Domain cluster: rep: SRR1747052_scaffold_7_prodigal-single.1__X__X__00076__D124-206
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11443.14 best DUF2828 43.6 2.70e-11 100.0% 13.1%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8carA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.65 50.0 3.08e-01 83.9% 28.3%
1dvhA00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.63 40.0 3.73e-01 100.0% 50.6%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 42.0 3.15e-01 98.4% 39.1%
2au3A04 1.20.50.30 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › 0.53 41.0 4.23e-01 95.2% 98.2%
1ny9A00 1.10.490.50 Mainly Alpha › Orthogonal Bundle › Globin-like › Antibiotic binding domain of TipA-like multidrug resistance regulators 0.52 42.0 3.78e-01 96.8% 87.2%
6ofsA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 38.0 2.65e-01 80.6% 55.7%
1owlA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 43.0 3.55e-01 100.0% 55.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3333939 109.16.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 0.94 89.0 5.35e-01 100.0% 18.8%
3424971 109.16.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 0.91 80.0 5.02e-01 95.2% 20.7%
3643129 7512.1.1.77 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_N 0.54 45.0 3.08e-01 100.0% 87.0%
4175163 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.52 43.0 3.03e-01 100.0% 64.0%
3970865 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.51 42.0 3.01e-01 100.0% 64.0%
D2 high residues 278-484
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25043.1 best DUF7788 195.6 9.50e-58 93.2% 83.7%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yvrA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.82 67.0 6.82e-01 96.6% 87.1%
1jeyB01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.72 62.0 6.00e-01 89.4% 98.7%
7xlqD02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.70 61.0 6.33e-01 92.3% 97.9%
3ibsA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.70 60.0 6.08e-01 89.9% 98.5%
2x5nA01 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.70 58.0 6.19e-01 87.0% 100.0%
1cvrA01 3.40.50.10390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 0.69 38.0 4.89e-01 84.1% 94.0%
4rsmA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 43.0 5.02e-01 96.1% 87.3%
4cn8A02 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.68 58.0 6.00e-01 89.9% 96.3%
1gpjA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 43.0 4.99e-01 99.5% 93.5%
8sp0A01 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.63 40.0 4.55e-01 87.0% 84.4%
7o62B01 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 39.0 4.77e-01 88.4% 100.0%
2yfkA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.61 39.0 4.05e-01 95.2% 68.3%
3hy3A00 3.40.50.10420 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NagB/RpiA/CoA transferase-like 0.57 42.0 4.36e-01 85.5% 79.6%
6qheB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 4.71e-01 95.7% 96.1%
3pvzB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.62e-01 100.0% 78.0%
1n5dA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 51.0 4.56e-01 97.6% 96.5%
2z2xA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.56 52.0 4.44e-01 99.5% 93.4%
3vc7A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 49.0 4.74e-01 95.2% 95.4%
3edmD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.97e-01 97.1% 99.1%
3ay3A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.91e-01 98.1% 99.1%
2o3rA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 33.0 4.13e-01 97.1% 97.6%
4qtzA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 49.0 4.22e-01 98.1% 92.5%
3clvA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 4.55e-01 91.8% 96.6%
3r7wA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 4.68e-01 90.3% 98.4%
1rkxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 44.0 4.56e-01 85.5% 100.0%
5iz4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 4.48e-01 95.2% 95.5%
3iupA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 40.0 4.20e-01 91.3% 86.2%
3p19B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 46.0 4.59e-01 95.2% 98.2%
6fdfA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 44.0 4.57e-01 89.4% 99.0%
2c5sA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 35.0 3.57e-01 99.5% 68.5%
1lw7A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 38.0 4.23e-01 86.0% 100.0%
3c3jA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.51 36.0 3.74e-01 99.0% 76.8%
2d5lA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 43.0 4.04e-01 91.8% 98.4%
2z0mA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 4.05e-01 86.5% 86.9%
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 43.0 3.93e-01 92.8% 98.6%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3833868 2006.1.6.40 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7788 0.91 88.0 8.12e-01 99.5% 88.4%
3635323 2006.1.6.40 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7788 0.90 82.0 8.34e-01 94.7% 94.6%
3247943 2006.1.6.40 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7788 0.90 78.0 8.29e-01 92.8% 100.0%
3424972 2006.1.6.40 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF7788 0.82 77.0 7.75e-01 99.5% 96.7%
3981063 2006.1.6.32 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › vWA_Ro60 0.81 73.0 7.54e-01 99.5% 100.0%
None — 0.75 64.0 6.34e-01 90.3% 93.6%
3727059 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.74 64.0 6.24e-01 90.3% 92.4%
4147569 2007.1.3.16 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N 0.74 44.0 5.21e-01 90.8% 85.0%
5079579 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.74 65.0 6.09e-01 91.8% 100.0%
4128742 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.73 55.0 5.56e-01 86.5% 76.2%
3406245 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.73 62.0 5.99e-01 88.4% 99.6%
4985340 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.73 60.0 6.46e-01 88.4% 100.0%
3557596 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.73 62.0 6.23e-01 88.4% 100.0%
4964796 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.73 51.0 5.97e-01 90.3% 100.0%
3630637 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.73 62.0 6.25e-01 89.4% 94.8%
5057273 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.73 60.0 6.29e-01 89.9% 95.1%
3269258 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.72 62.0 5.88e-01 88.9% 99.6%
4985336 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.72 51.0 5.94e-01 87.9% 100.0%
3999151 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.72 64.0 6.04e-01 93.2% 93.8%
4936416 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.72 62.0 5.85e-01 90.8% 96.3%
4998535 2006.1.6.45 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.71 62.0 6.16e-01 90.3% 96.2%
5060607 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 62.0 6.44e-01 90.3% 100.0%
3926566 2006.1.6.5 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 0.71 64.0 6.36e-01 95.7% 99.5%
3258554 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.71 60.0 6.25e-01 91.8% 95.3%
5057179 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.71 52.0 5.92e-01 94.7% 100.0%
4971316 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.71 61.0 5.74e-01 91.3% 86.0%
3972521 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.70 61.0 6.05e-01 90.3% 93.5%
3969989 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.70 54.0 5.91e-01 86.5% 95.9%
4010065 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.70 60.0 6.33e-01 91.3% 100.0%
3959674 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.70 58.0 5.97e-01 86.0% 98.0%
4944900 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.70 58.0 5.72e-01 85.0% 96.3%
5000961 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.70 60.0 5.89e-01 89.9% 100.0%
3327589 2006.1.6.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.70 59.0 5.97e-01 87.4% 100.0%
4997796 2006.1.6.45 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.70 61.0 5.44e-01 91.8% 69.2%
136176 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.70 60.0 6.08e-01 89.9% 98.5%
4979707 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.70 60.0 5.71e-01 91.3% 94.7%
5062017 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 59.0 6.22e-01 90.3% 99.5%
3352911 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.69 42.0 4.59e-01 89.4% 71.4%
3903207 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 60.0 4.58e-01 90.8% 45.4%
4989225 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 60.0 6.09e-01 90.8% 96.5%
5021669 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.69 51.0 5.69e-01 94.7% 95.2%
3583891 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 57.0 3.98e-01 90.3% 28.3%
5073395 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.69 58.0 5.92e-01 89.4% 99.5%
3577853 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.69 59.0 5.70e-01 90.8% 80.9%
4975173 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.69 59.0 6.09e-01 89.4% 95.4%
3670572 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.69 63.0 6.04e-01 98.6% 93.8%
4020448 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 61.0 6.05e-01 93.2% 93.0%
4971996 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.69 59.0 5.97e-01 91.8% 95.2%
3659669 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.68 59.0 5.70e-01 91.8% 89.4%
5024101 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.68 62.0 6.25e-01 97.1% 97.0%
3978017 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.68 63.0 4.79e-01 99.5% 66.4%
5052403 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.68 55.0 5.76e-01 84.1% 92.1%
3769836 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 60.0 5.89e-01 92.8% 92.7%
3617647 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 56.0 5.89e-01 89.4% 95.7%
3234945 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.68 61.0 6.15e-01 94.7% 98.5%
3249752 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.68 63.0 6.10e-01 99.0% 88.3%
3299538 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.68 62.0 6.31e-01 98.1% 100.0%
4983536 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.67 58.0 5.49e-01 90.3% 95.0%
4937644 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.67 57.0 6.04e-01 91.3% 98.9%
4937052 2006.1.6.15 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 0.67 61.0 5.72e-01 96.6% 92.8%
3604563 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.66 50.0 5.55e-01 78.3% 100.0%
3926947 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.66 56.0 5.57e-01 92.8% 86.5%
3962309 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.65 59.0 6.05e-01 100.0% 100.0%
3789555 2006.1.6.51 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF29444 0.65 56.0 5.75e-01 90.8% 99.5%
4113346 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.65 59.0 5.89e-01 99.5% 94.3%
5045562 2007.15.1.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyrib_tr 0.64 42.0 5.04e-01 90.8% 100.0%
3589686 2007.1.2.10 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.61 44.0 4.93e-01 96.6% 94.4%
3449559 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 48.0 5.03e-01 90.3% 97.8%
3945284 2004.1.1.206 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.56 47.0 4.20e-01 88.9% 95.8%
3705346 2005.2.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › YdcF › YdcF 0.55 41.0 3.87e-01 77.8% 80.8%
3264170 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.54 47.0 3.73e-01 91.8% 56.3%
3256855 2004.1.1.150 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DRMBL 0.54 34.0 3.88e-01 86.5% 83.3%
D3 medium residues 19-81
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11443.14 best DUF2828 42.3 6.70e-11 100.0% 14.6%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.72 50.0 5.20e-01 73.0% 94.7%
3nf4A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.69 55.0 4.44e-01 87.3% 84.9%
4m9aA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.68 54.0 4.38e-01 87.3% 85.7%
1rx0C01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.67 54.0 4.32e-01 87.3% 82.1%
1bucA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.67 53.0 4.29e-01 87.3% 85.4%
1r2jA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.66 52.0 4.47e-01 87.3% 97.1%
2jifA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.65 51.0 4.19e-01 87.3% 86.4%
8cdaC01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.64 50.0 4.15e-01 87.3% 90.6%
1gwiA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.63 48.0 2.96e-01 84.1% 58.2%
3woyA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 49.0 3.34e-01 90.5% 46.7%
2cwqA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.61 53.0 4.30e-01 100.0% 52.4%
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.61 45.0 3.63e-01 81.0% 69.7%
3gxhA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 46.0 3.61e-01 100.0% 87.8%
2b8iA00 1.20.1280.100 Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain 0.53 40.0 3.87e-01 85.7% 75.3%
1i17A00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.53 39.0 3.37e-01 81.0% 58.9%
4p9tA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.53 38.0 3.31e-01 84.1% 73.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1108191 604.17.1.1 ↗ alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C 0.73 51.0 5.03e-01 73.0% 82.1%
3288546 4033.1.1.1 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.70 58.0 4.89e-01 90.5% 78.1%
3597794 4033.1.1.1 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.69 55.0 3.93e-01 87.3% 60.5%
139645 4033.1.1.1 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.69 55.0 4.45e-01 87.3% 84.9%
53474 4033.1.1.0 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like 0.67 53.0 4.33e-01 87.3% 83.5%
53482 4033.1.1.0 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like 0.66 52.0 4.29e-01 87.3% 85.6%
3565 4033.1.1.1 ↗ alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N 0.66 52.0 4.48e-01 87.3% 98.0%
3673509 4048.1.1.1 ↗ alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.63 48.0 4.80e-01 82.5% 93.8%
4160596 4048.1.1.1 ↗ alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel 0.59 45.0 4.17e-01 82.5% 73.5%
4965514 2008.1.1.227 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF5784 0.50 42.0 3.03e-01 100.0% 88.8%
D4 medium residues 82-212
PDB
Domain cluster: rep: SRR1747052_scaffold_7_prodigal-single.1__X__X__00076__D1-112