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ON602731.1__UVX29601.1__S6a_00009__00009
Bact-VirON602731.1__UVX29601.1__S6a_00009__00009
Identity
- Accession:
- ON602731 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-75
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 45.0 | 4.02e-01 | 77.8% | 43.0% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.71 | 51.0 | 4.87e-01 | 76.4% | 89.3% |
| 4jneA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.66 | 47.0 | 4.44e-01 | 76.4% | 89.8% |
| 5k8jB00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.66 | 45.0 | 3.72e-01 | 70.8% | 43.3% |
| 2oq1A02 | 1.10.930.10 | Mainly Alpha › Orthogonal Bundle › Syk Kinase; Chain A, domain 2 › Syk Kinase; Chain A, domain 2 | 0.65 | 37.0 | 4.51e-01 | 76.4% | 91.1% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 4.70e-01 | 98.6% | 70.7% |
| 2k89A00 | 3.10.20.870 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain | 0.65 | 47.0 | 4.58e-01 | 77.8% | 95.0% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 44.0 | 4.19e-01 | 98.6% | 61.9% |
| 2x3mA00 | 1.25.40.670 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 51.0 | 3.95e-01 | 90.3% | 53.0% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.61 | 46.0 | 3.15e-01 | 83.3% | 81.7% |
| 4hiaA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 54.0 | 4.07e-01 | 100.0% | 43.8% |
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.60 | 54.0 | 3.79e-01 | 97.2% | 44.9% |
| 4wriA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 49.0 | 3.67e-01 | 91.7% | 81.3% |
| 2x3fA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.59 | 48.0 | 4.36e-01 | 90.3% | 96.0% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.57 | 46.0 | 4.71e-01 | 100.0% | 92.8% |
| 3mxtA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.57 | 46.0 | 4.23e-01 | 93.1% | 97.0% |
| 1fp2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 42.0 | 3.86e-01 | 94.4% | 60.4% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 40.0 | 4.21e-01 | 75.0% | 97.0% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 43.0 | 4.07e-01 | 88.9% | 95.7% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.56 | 44.0 | 3.88e-01 | 84.7% | 95.2% |
| 1wtjB01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.55 | 48.0 | 4.41e-01 | 98.6% | 81.4% |
| 3votB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 41.0 | 2.75e-01 | 80.6% | 51.9% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 40.0 | 2.57e-01 | 77.8% | 25.4% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 44.0 | 3.47e-01 | 91.7% | 94.0% |
| 4dqnA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.55 | 46.0 | 3.69e-01 | 98.6% | 89.2% |
| 1nxuA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.54 | 47.0 | 4.56e-01 | 100.0% | 87.3% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.75e-01 | 95.8% | 65.5% |
| 2o0yB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 45.0 | 3.52e-01 | 97.2% | 56.5% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.54 | 38.0 | 3.70e-01 | 73.6% | 72.2% |
| 2qwvA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.54 | 41.0 | 3.21e-01 | 88.9% | 58.5% |
| 5u3fB01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.53 | 45.0 | 3.69e-01 | 98.6% | 98.6% |
| 3ccfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.20e-01 | 98.6% | 95.4% |
| 2f2eA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.59e-01 | 95.8% | 61.5% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.72e-01 | 95.8% | 70.0% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 37.0 | 2.58e-01 | 76.4% | 24.3% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.14e-01 | 97.2% | 98.9% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.24e-01 | 97.2% | 60.9% |
| 4ehoB03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.51 | 41.0 | 3.14e-01 | 91.7% | 95.0% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.49e-01 | 84.7% | 72.3% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.50 | 41.0 | 3.32e-01 | 94.4% | 47.7% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4935672 | 2492.1.1.7 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ | 0.79 | 50.0 | 3.94e-01 | 100.0% | 32.9% |
| 3217608 | 284.1.2.1 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C | 0.73 | 64.0 | 5.79e-01 | 98.6% | 97.0% |
| 3682257 | 284.1.3.9 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › WLM | 0.72 | 51.0 | 4.80e-01 | 76.4% | 91.1% |
| 4191800 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.71 | 50.0 | 5.59e-01 | 73.6% | 100.0% |
| None | — | 0.69 | 48.0 | 3.34e-01 | 72.2% | 78.2% | |
| 4941346 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.68 | 49.0 | 4.88e-01 | 77.8% | 72.0% |
| 3602853 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.67 | 50.0 | 4.18e-01 | 80.6% | 60.8% |
| 3590231 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.67 | 49.0 | 4.33e-01 | 77.8% | 71.4% |
| 3239643 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 43.0 | 4.46e-01 | 97.2% | 72.3% |
| 4945701 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 44.0 | 4.25e-01 | 70.8% | 100.0% |
| 4963293 | 101.1.2.921 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7109 | 0.65 | 46.0 | 4.28e-01 | 97.2% | 58.9% |
| 3625974 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.64 | 49.0 | 4.63e-01 | 84.7% | 77.8% |
| 3006087 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.63 | 43.0 | 3.50e-01 | 70.8% | 38.7% |
| 4951953 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.61 | 44.0 | 3.31e-01 | 77.8% | 90.8% |
| 3697200 | 4049.1.1.2 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › Sirohm_synth_C | 0.60 | 43.0 | 4.30e-01 | 76.4% | 96.0% |
| 140384 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.60 | 54.0 | 3.79e-01 | 97.2% | 44.7% |
| 3408369 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.60 | 47.0 | 4.65e-01 | 98.6% | 82.7% |
| 3470090 | 864.1.1.1 ↗ | a+b two layers › DLC › DLC › DLC › Dynein_light | 0.59 | 46.0 | 4.69e-01 | 84.7% | 100.0% |
| 3808939 | 109.4.1.619 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DYW_deaminase | 0.59 | 41.0 | 3.39e-01 | 73.6% | 68.1% |
| 5000805 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.58 | 47.0 | 4.41e-01 | 87.5% | 83.0% |
| 3652806 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.58 | 41.0 | 4.59e-01 | 97.2% | 100.0% |
| 5051039 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 36.0 | 3.41e-01 | 95.8% | 50.0% |
| 4959470 | 873.1.1.12 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 | 0.57 | 47.0 | 3.99e-01 | 90.3% | 75.0% |
| 3658323 | 284.1.2.1 ↗ | a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases › OSR1_C | 0.57 | 47.0 | 4.22e-01 | 100.0% | 63.8% |
| 4933315 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 4.16e-01 | 94.4% | 71.2% |
| 3518991 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.57 | 45.0 | 4.46e-01 | 98.6% | 82.7% |
| 3814339 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.57 | 43.0 | 4.43e-01 | 98.6% | 85.5% |
| 3487239 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 4.02e-01 | 94.4% | 80.0% |
| 3930245 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.56 | 45.0 | 3.92e-01 | 87.5% | 83.6% |
| 5021128 | 873.1.1.12 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 | 0.56 | 46.0 | 3.88e-01 | 91.7% | 74.4% |
| 3926567 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 4.11e-01 | 94.4% | 82.7% |
| 3782381 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.55 | 45.0 | 3.76e-01 | 90.3% | 86.4% |
| 4024318 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 4.42e-01 | 94.4% | 84.7% |
| 3773205 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 38.0 | 3.89e-01 | 76.4% | 92.9% |
| 3408368 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.54 | 47.0 | 4.34e-01 | 100.0% | 76.8% |
| 5024785 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 45.0 | 3.91e-01 | 93.1% | 74.5% |
| 3264668 | 101.1.2.304 ↗ | alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase | 0.52 | 40.0 | 3.96e-01 | 95.8% | 78.7% |
| 5025553 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.52 | 44.0 | 3.94e-01 | 93.1% | 69.0% |
| 3698416 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.52 | 48.0 | 3.25e-01 | 100.0% | 82.9% |
| None | — | 0.52 | 38.0 | 3.53e-01 | 100.0% | 61.1% | |
| 4997012 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.19e-01 | 95.8% | 37.6% |
| 4283161 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.51 | 41.0 | 3.18e-01 | 98.6% | 52.5% |
| 5011654 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.51 | 38.0 | 3.94e-01 | 95.8% | 88.4% |