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ON615601.1__UTS51991.1__X__00043

Bact-Vir

ON615601.1__UTS51991.1__X__00043

Identity

Accession:
ON615601 ↗
Kingdom:
phage

Quality

82.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Synechococcus_phage_BUCT-ZZ01

TaxID: 2951202

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-105
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l8kA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 57.0 3.83e-01 82.8% 26.7%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 6.10e-01 94.8% 94.6%
3mdmA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.71 61.0 3.65e-01 100.0% 70.3%
1hlvA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 5.76e-01 91.4% 90.0%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 55.0 4.62e-01 84.5% 60.4%
1i1rB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.68 61.0 4.31e-01 98.3% 92.8%
2icwG02 1.10.10.530 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 0.66 57.0 5.00e-01 100.0% 70.8%
2m4eA00 1.20.120.1930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family 0.66 47.0 4.12e-01 75.9% 73.3%
4hwdD00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.65 59.0 5.01e-01 98.3% 82.2%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.65 51.0 4.72e-01 84.5% 86.5%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 50.0 4.53e-01 91.4% 63.2%
4ui9Y03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 40.0 3.62e-01 86.2% 46.3%
3uw3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.64 55.0 3.70e-01 96.6% 49.8%
3vkgA15 1.10.8.1220 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 49.0 4.23e-01 89.7% 69.1%
3k1zA02 1.10.150.720 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Haloacid dehalogenase-like hydrolase 0.60 51.0 4.55e-01 96.6% 94.0%
4y0bA00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.60 48.0 3.66e-01 89.7% 70.7%
1ylmA00 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.60 54.0 3.99e-01 100.0% 43.0%
3iqtA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.58 50.0 4.08e-01 100.0% 78.1%
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.58 49.0 4.28e-01 100.0% 77.1%
3r0xA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 43.0 3.35e-01 79.3% 51.2%
2lxlA00 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.58 50.0 3.63e-01 96.6% 37.4%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.57 49.0 3.99e-01 96.6% 57.7%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.57 51.0 3.96e-01 100.0% 78.4%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 48.0 3.61e-01 94.8% 42.4%
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 3.20e-01 87.9% 32.7%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 33.0 3.19e-01 89.7% 53.7%
1g5cA00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.53 42.0 3.05e-01 87.9% 48.5%
1pn9B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 44.0 3.52e-01 100.0% 58.5%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 38.0 3.80e-01 91.4% 77.0%
5ekcF01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.51 43.0 2.79e-01 96.6% 33.4%
3sl9B00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 41.0 3.04e-01 100.0% 33.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3960745 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.85 57.0 6.37e-01 86.2% 91.1%
5035598 3930.1.1.3 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.74 58.0 4.52e-01 100.0% 40.0%
3479514 101.1.2.318 ↗ alpha arrays › HTH › HTH › winged helix domain › HSD3 0.73 65.0 6.16e-01 100.0% 82.9%
3494078 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 6.29e-01 100.0% 89.2%
3962282 3419.1.1.2 ↗ alpha bundles › Antitoxin VbhA › Antitoxin VbhA › Antitoxin VbhA › VbhA 0.73 52.0 5.35e-01 82.8% 78.2%
3492451 101.35.1.18 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › HSD3 0.73 65.0 6.12e-01 100.0% 82.9%
4992431 3930.1.1.3 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical 0.73 58.0 4.51e-01 100.0% 40.8%
3234723 148.1.1.18 ↗ alpha arrays › Histone-like › Histone-related › Histone › CENP-S 0.72 55.0 4.58e-01 82.8% 49.5%
3580853 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 62.0 6.00e-01 100.0% 87.7%
4446563 101.1.2.318 ↗ alpha arrays › HTH › HTH › winged helix domain › HSD3 0.71 60.0 5.96e-01 96.6% 91.7%
3316066 192.4.1.42 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › WAV3_C 0.67 58.0 4.72e-01 100.0% 52.4%
3943035 639.2.1.0 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.66 58.0 5.67e-01 100.0% 95.4%
3438249 601.18.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 0.66 55.0 4.74e-01 100.0% 64.0%
3971484 5063.1.1.2 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › MadL 0.65 57.0 4.53e-01 96.6% 65.2%
3236284 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.64 59.0 5.22e-01 100.0% 92.5%
3214189 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 58.0 4.70e-01 100.0% 87.6%
5043236 601.7.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like 0.64 55.0 4.40e-01 96.6% 57.4%
4991155 1076.1.1.1 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.63 56.0 3.83e-01 100.0% 71.7%
4996303 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 4.96e-01 94.8% 81.5%
2168148 601.7.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like 0.63 54.0 4.10e-01 94.8% 69.2%
3526105 604.3.1.18 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27519 0.61 54.0 4.64e-01 98.3% 77.8%
3219083 108.1.1.21 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › SPARC_Ca_bdg 0.61 53.0 4.22e-01 96.6% 98.3%
5053233 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.60 45.0 3.95e-01 79.3% 54.1%
3398253 601.4.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › NIT 0.60 55.0 4.17e-01 100.0% 80.0%
4975992 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.57 48.0 4.09e-01 94.8% 66.3%
5065515 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.56 47.0 4.02e-01 94.8% 66.3%
3948672 639.2.1.1 ↗ alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.55 40.0 4.13e-01 82.8% 96.4%
4968937 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 40.0 2.80e-01 91.4% 41.8%
3481992 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.50 39.0 3.62e-01 84.5% 86.7%