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ON615601.1__UTS52080.1__X__00132

Bact-Vir

ON615601.1__UTS52080.1__X__00132

Identity

Accession:
ON615601 ↗
Kingdom:
phage

Quality

67.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-52
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.83 61.0 4.26e-01 80.0% 26.0%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.79 58.0 5.12e-01 90.0% 54.1%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.77 64.0 4.38e-01 100.0% 31.4%
6i4pA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.76 55.0 3.89e-01 80.0% 25.4%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.75 63.0 3.72e-01 100.0% 12.7%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.75 62.0 3.54e-01 100.0% 11.3%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.75 64.0 3.75e-01 100.0% 12.9%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.74 60.0 4.30e-01 97.5% 56.6%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.74 56.0 4.95e-01 82.5% 55.9%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.73 61.0 3.68e-01 100.0% 14.3%
2x6hA02 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.73 62.0 4.17e-01 100.0% 51.6%
4l2iA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 56.0 3.55e-01 85.0% 16.6%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 62.0 5.34e-01 100.0% 66.7%
3fssA01 2.30.29.120 Mainly Beta › Roll › PH-domain like › 0.72 60.0 4.24e-01 100.0% 35.3%
1v58A01 3.10.450.70 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal 0.71 58.0 4.97e-01 100.0% 56.3%
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.71 52.0 3.72e-01 85.0% 87.9%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.71 58.0 4.23e-01 100.0% 36.3%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 56.0 4.34e-01 92.5% 86.2%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.70 56.0 5.21e-01 97.5% 72.2%
1xm8A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.69 57.0 3.49e-01 95.0% 15.4%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.69 56.0 4.42e-01 92.5% 79.1%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.69 57.0 5.20e-01 100.0% 71.9%
6yllA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 54.0 4.48e-01 97.5% 100.0%
2rkuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 55.0 4.47e-01 100.0% 88.8%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.68 55.0 4.06e-01 100.0% 84.1%
4n04A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.67 49.0 3.63e-01 82.5% 28.8%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.67 53.0 3.26e-01 100.0% 15.7%
1kw3B02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.66 48.0 3.35e-01 85.0% 24.7%
2xf4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.66 53.0 3.45e-01 97.5% 18.6%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.66 51.0 3.16e-01 100.0% 14.0%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.65 53.0 3.51e-01 95.0% 68.5%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 54.0 3.84e-01 100.0% 51.1%
1uyjA01 3.30.360.60 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › 0.65 49.0 3.94e-01 90.0% 41.5%
1ko2A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.65 51.0 3.31e-01 100.0% 87.4%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 48.0 3.27e-01 80.0% 22.6%
6gfaA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.64 44.0 4.03e-01 87.5% 51.8%
4a7kA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 50.0 3.49e-01 95.0% 59.5%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.64 53.0 4.24e-01 100.0% 55.1%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.64 52.0 4.76e-01 100.0% 77.6%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 4.08e-01 95.0% 74.4%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.61 49.0 4.04e-01 100.0% 47.7%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 50.0 3.83e-01 100.0% 47.0%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 47.0 3.65e-01 100.0% 76.4%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 3.70e-01 85.0% 42.2%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 46.0 3.34e-01 97.5% 29.9%
3i3lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 41.0 2.46e-01 90.0% 34.6%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.56 43.0 3.95e-01 100.0% 60.7%
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.55 39.0 3.14e-01 90.0% 33.0%
6qcbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 40.0 3.29e-01 95.0% 55.7%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3491028 2003.1.2.34 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase 0.91 68.0 3.76e-01 80.0% 6.8%
4491369 2003.1.3.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.89 67.0 3.86e-01 80.0% 10.5%
4931231 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.89 63.0 3.91e-01 80.0% 15.0%
4102022 2003.1.3.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.87 64.0 3.65e-01 80.0% 8.8%
3173920 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.86 64.0 3.68e-01 80.0% 9.4%
4089916 2003.1.2.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Mqo 0.86 63.0 3.46e-01 80.0% 6.0%
4031789 4959.1.1.0 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit 0.85 60.0 5.20e-01 80.0% 50.0%
4531826 2003.1.3.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.84 62.0 3.63e-01 80.0% 10.5%
3660366 2003.1.2.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like 0.84 62.0 3.65e-01 80.0% 10.7%
3256432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 64.0 5.55e-01 90.0% 55.0%
4970357 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.84 61.0 3.34e-01 80.0% 5.1%
None 0.84 61.0 3.60e-01 80.0% 10.5%
4138935 4.1.1.241 beta barrels › SH3 › SH3 › SH3 › NifZ 0.84 63.0 5.12e-01 90.0% 44.0%
4943922 2005.1.1.122 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF_alpha 0.83 65.0 4.01e-01 85.0% 16.2%
None 0.82 60.0 3.36e-01 80.0% 6.7%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.82 57.0 4.32e-01 77.5% 31.6%
3607725 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.82 70.0 4.00e-01 100.0% 10.1%
3369818 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.81 63.0 5.35e-01 85.0% 53.8%
4501723 4.8.1.45 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.80 61.0 5.56e-01 92.5% 61.8%
3961918 2003.1.3.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo 0.80 58.0 3.45e-01 80.0% 10.9%
4975559 2005.1.1.10 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.79 61.0 3.79e-01 85.0% 15.8%
4999817 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.79 58.0 5.65e-01 82.5% 80.0%
3285829 4.1.1.425 beta barrels › SH3 › SH3 › SH3 › RNHCP 0.78 55.0 4.08e-01 77.5% 29.5%
4928794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 58.0 5.62e-01 82.5% 73.3%
3225123 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 62.0 5.98e-01 90.0% 88.9%
4000403 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.76 55.0 5.14e-01 90.0% 62.0%
4673289 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.75 55.0 3.64e-01 85.0% 18.9%
1227254 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.75 64.0 3.78e-01 100.0% 13.7%
4211951 2.1.1.14 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.75 65.0 5.06e-01 95.0% 76.2%
4261760 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.75 56.0 4.30e-01 90.0% 34.7%
3631383 2003.1.2.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.75 54.0 3.63e-01 80.0% 20.0%
4948574 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.74 68.0 3.83e-01 100.0% 57.5%
3925471 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 54.0 4.87e-01 90.0% 55.0%
3940690 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 54.0 4.00e-01 80.0% 32.4%
4937757 246.2.1.9 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 0.73 60.0 4.05e-01 100.0% 100.0%
4979493 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 63.0 4.52e-01 100.0% 49.2%
3433041 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.72 59.0 3.61e-01 100.0% 25.8%
3480321 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 56.0 4.62e-01 90.0% 68.8%
4938265 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.72 60.0 5.38e-01 100.0% 68.3%
4948758 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 61.0 5.15e-01 100.0% 85.7%
4929725 375.1.1.289 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 0.71 52.0 5.07e-01 80.0% 71.1%
3504458 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.70 57.0 3.47e-01 100.0% 25.9%
5068438 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.70 60.0 4.22e-01 100.0% 45.4%
4024366 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.69 56.0 3.39e-01 100.0% 25.0%
3796352 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 56.0 4.93e-01 100.0% 60.0%
3250197 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 56.0 3.33e-01 100.0% 23.8%
3784940 2.1.1.119 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM10_OB 0.69 58.0 3.84e-01 100.0% 42.3%
4379563 375.1.1.289 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 0.69 51.0 5.01e-01 82.5% 73.3%
5055744 5.1.3.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 0.68 53.0 3.20e-01 100.0% 11.8%
4031136 6043.1.1.3 a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.68 57.0 5.10e-01 100.0% 70.0%
5056748 5.1.3.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 0.68 55.0 3.27e-01 100.0% 14.1%
4980908 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.67 50.0 3.46e-01 85.0% 23.9%
3440839 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.67 46.0 3.42e-01 90.0% 29.0%
3214307 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.67 49.0 5.04e-01 82.5% 100.0%
3467141 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.67 47.0 3.48e-01 95.0% 28.2%
3607857 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 50.0 3.82e-01 85.0% 43.0%
5037496 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.66 51.0 3.68e-01 97.5% 59.3%
5045333 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 52.0 4.58e-01 100.0% 58.0%
3479384 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 53.0 3.45e-01 100.0% 22.4%
1548066 6.1.1.24 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CARDS-D2_trefoil 0.64 51.0 3.44e-01 95.0% 77.8%
4179811 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.64 54.0 5.44e-01 100.0% 100.0%
381 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.63 49.0 4.15e-01 95.0% 78.2%
3204558 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.63 52.0 3.44e-01 95.0% 22.4%
4940173 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.58 45.0 4.43e-01 92.5% 88.9%
5005974 304.51.1.6 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cmr3 0.58 41.0 2.59e-01 82.5% 12.8%
3783916 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 42.0 4.01e-01 90.0% 74.5%
3561094 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.55 44.0 3.75e-01 97.5% 76.0%
1546151 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.54 41.0 3.35e-01 95.0% 55.1%