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ON645338.1__UUG69316.1__SEA_SCIENCEWIZSAM_74__00074

Bact-Vir

ON645338.1__UUG69316.1__SEA_SCIENCEWIZSAM_74__00074

Identity

Accession:
ON645338 ↗
Kingdom:
phage

Quality

76.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Gordonvirus› Arthrobacter_phage_ScienceWizSam

TaxID: 2927283

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 80-144
PDB
Domain cluster: rep: SRR1747065_scaffold_38_prodigal-single.1__X__X__00176__D6-88
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.84 74.0 6.17e-01 95.4% 59.4%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 44.0 4.52e-01 87.7% 70.5%
3m7nA03 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.57 31.0 3.83e-01 80.0% 100.0%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 4.28e-01 92.3% 96.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 3.75e-01 96.9% 60.0%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 34.0 2.91e-01 84.6% 38.6%
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 33.0 3.70e-01 83.1% 94.9%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 4.27e-01 90.8% 88.7%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 36.0 3.68e-01 86.2% 69.7%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 41.0 2.78e-01 86.2% 83.4%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 35.0 3.49e-01 84.6% 64.2%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 35.0 3.52e-01 86.2% 66.7%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 3.81e-01 90.8% 72.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 4.06e-01 95.4% 81.8%
5h1kA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 44.0 2.87e-01 100.0% 25.2%
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 34.0 3.51e-01 84.6% 72.1%
1vclA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 43.0 3.44e-01 100.0% 95.3%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.51 43.0 4.36e-01 95.4% 95.2%
1j71A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 45.0 3.41e-01 100.0% 81.4%
1yr1A00 3.40.50.10960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 41.0 3.44e-01 93.8% 69.7%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036086 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 37.0 3.51e-01 86.2% 45.0%
4958385 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 37.0 4.35e-01 83.1% 87.5%
4937178 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 42.0 4.29e-01 96.9% 76.9%
5034254 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 42.0 4.28e-01 96.9% 76.9%
4932588 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 42.0 4.22e-01 96.9% 76.9%
4981300 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 41.0 4.17e-01 96.9% 76.9%
4978125 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 38.0 4.28e-01 89.2% 100.0%
5028692 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 41.0 4.18e-01 96.9% 78.5%
5076401 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 40.0 4.00e-01 96.9% 71.4%
5058270 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 41.0 4.23e-01 96.9% 85.0%
4986252 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 35.0 3.92e-01 86.2% 88.9%
4959192 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 40.0 4.08e-01 98.5% 78.5%
4968248 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 40.0 3.95e-01 96.9% 72.9%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.55 41.0 3.92e-01 96.9% 68.0%
4046385 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.55 42.0 3.29e-01 81.5% 80.7%
4927653 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 41.0 4.13e-01 96.9% 81.5%
3363360 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.55 42.0 3.88e-01 98.5% 64.7%
4930861 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 40.0 4.04e-01 96.9% 80.0%
4936253 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 39.0 3.85e-01 96.9% 71.4%
3941962 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.54 40.0 3.69e-01 96.9% 58.9%
4996195 304.39.1.6 ↗ a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_2nd 0.54 38.0 3.97e-01 92.3% 81.7%
3708055 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.54 42.0 4.23e-01 96.9% 86.2%
3758626 375.1.1.37 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon 0.53 31.0 3.13e-01 78.5% 58.5%
5066141 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.53 38.0 3.88e-01 96.9% 80.0%
3601162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 4.11e-01 96.9% 86.2%
3660358 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 41.0 4.31e-01 95.4% 91.7%
3218646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 35.0 3.52e-01 89.2% 69.2%