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ON645339.1__UUG69497.1__SEA_SHAM_196__00159

Bact-Vir

ON645339.1__UUG69497.1__SEA_SHAM_196__00159

Identity

Accession:
ON645339 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Stanwilliamsviridae› Annadreamyvirus› Streptomyces_phage_Sham

TaxID: 2951208

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.66 55.0 3.60e-01 94.6% 45.5%
3lidA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 46.0 3.84e-01 73.2% 92.7%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 4.96e-01 100.0% 64.0%
1ycyA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.96e-01 98.2% 80.6%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.63 42.0 3.77e-01 71.4% 81.0%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 46.0 2.93e-01 80.4% 23.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 4.80e-01 100.0% 67.5%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.62 48.0 3.47e-01 87.5% 50.3%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 44.0 3.81e-01 100.0% 48.3%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 51.0 4.17e-01 94.6% 85.5%
1xg9A02 3.10.25.20 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › 0.62 41.0 4.02e-01 82.1% 62.9%
2jjdF02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 46.0 3.02e-01 82.1% 24.8%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 48.0 2.94e-01 87.5% 23.9%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 3.96e-01 83.9% 64.8%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.60 42.0 3.16e-01 76.8% 69.8%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 49.0 4.46e-01 100.0% 87.5%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.58 49.0 4.25e-01 100.0% 69.9%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 47.0 3.45e-01 100.0% 35.0%
2p13A00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 39.0 3.41e-01 71.4% 89.4%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 48.0 3.03e-01 91.1% 74.0%
1vqwA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 48.0 3.01e-01 100.0% 48.4%
6r2nA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 38.0 2.97e-01 73.2% 90.7%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.55 43.0 2.76e-01 87.5% 20.0%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 49.0 3.77e-01 100.0% 65.4%
5wcmA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 41.0 2.78e-01 85.7% 42.2%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.21e-01 100.0% 31.4%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.55 43.0 3.21e-01 89.3% 44.7%
4l1nA00 2.40.128.660 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF15525, DUF4652 0.55 44.0 3.16e-01 89.3% 37.9%
3g1pA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 41.0 2.73e-01 83.9% 61.0%
2nqwA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.54 37.0 3.27e-01 73.2% 92.0%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 4.03e-01 100.0% 74.7%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 40.0 2.71e-01 83.9% 55.1%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 39.0 3.16e-01 80.4% 79.5%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 46.0 4.08e-01 100.0% 70.2%
7c5yA02 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 3.01e-01 83.9% 92.8%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 47.0 3.11e-01 100.0% 55.7%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.47e-01 89.3% 93.6%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 40.0 3.18e-01 82.1% 76.1%
1tqzA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.48e-01 98.2% 95.1%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.53 41.0 3.17e-01 85.7% 44.3%
3u2gA02 2.60.98.40 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain 0.53 38.0 3.07e-01 82.1% 69.0%
7vjvA01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.53 37.0 2.63e-01 78.6% 84.5%
2i7tA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.52 40.0 2.66e-01 85.7% 53.3%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.08e-01 91.1% 68.6%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 2.91e-01 92.9% 70.0%
1whmA01 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.52 43.0 4.04e-01 98.2% 100.0%
3tesA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.42e-01 85.7% 86.2%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.52 44.0 3.21e-01 96.4% 47.8%
3kztA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 39.0 3.17e-01 89.3% 78.0%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.51 43.0 3.84e-01 98.2% 75.9%
1qh5A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 39.0 2.64e-01 89.3% 37.7%
2qa1A02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.27e-01 76.8% 59.5%
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.51 36.0 2.71e-01 75.0% 56.5%
4d02A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 34.0 2.38e-01 75.0% 26.4%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3796820 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.74 40.0 3.50e-01 100.0% 35.3%
4029617 5.1.11.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DUF7899 0.69 55.0 3.21e-01 87.5% 12.0%
5017861 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.67 50.0 3.05e-01 82.1% 19.5%
3210897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.10e-01 100.0% 72.9%
157624 4.1.1.47 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin6 0.66 57.0 4.96e-01 100.0% 64.0%
3277369 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 45.0 3.78e-01 71.4% 58.9%
3272112 3264.1.1.0 ↗ 0.65 48.0 3.52e-01 78.6% 35.5%
3704305 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.65 56.0 5.23e-01 100.0% 78.6%
5034832 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.09e-01 100.0% 88.6%
3604640 3740.1.1.1 ↗ alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.64 54.0 3.50e-01 92.9% 51.4%
3953772 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.64 47.0 3.70e-01 80.4% 46.4%
4971131 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 46.0 2.67e-01 82.1% 8.4%
4163661 4.1.1.446 ↗ beta barrels › SH3 › SH3 › SH3 › PF30222 0.63 53.0 5.09e-01 100.0% 85.3%
5070306 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.51e-01 100.0% 80.0%
3987498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.48e-01 100.0% 61.2%
3622833 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.62 43.0 2.86e-01 73.2% 64.5%
5031673 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.33e-01 100.0% 69.5%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.64e-01 100.0% 70.0%
3610047 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.60 49.0 3.58e-01 92.9% 86.9%
3536857 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.59 49.0 3.49e-01 91.1% 78.8%
5018058 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.59 45.0 2.95e-01 83.9% 64.4%
3229319 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 50.0 4.13e-01 100.0% 70.0%
4106342 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.59 46.0 4.04e-01 89.3% 84.4%
3632804 5.1.4.661 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.58 46.0 2.75e-01 87.5% 18.5%
4026408 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.58 48.0 4.10e-01 100.0% 55.0%
4026222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 50.0 3.76e-01 100.0% 68.3%
3620446 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.75e-01 100.0% 57.9%
162092 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.57 47.0 3.54e-01 100.0% 38.2%
3953981 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.57 45.0 2.93e-01 87.5% 72.1%
5012193 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 2.86e-01 80.4% 43.8%
5032478 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.57 45.0 3.14e-01 87.5% 84.2%
5071194 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.57 43.0 2.96e-01 83.9% 60.0%
4025021 247.1.1.44 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_6 0.57 45.0 2.83e-01 87.5% 78.9%
4109046 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 47.0 4.24e-01 100.0% 82.4%
3256856 247.1.1.9 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL 0.56 45.0 3.06e-01 87.5% 75.1%
5011326 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.56 45.0 3.07e-01 85.7% 64.2%
4882197 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.56 47.0 3.82e-01 98.2% 87.3%
4377781 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 47.0 4.27e-01 100.0% 78.8%
5013540 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.56 44.0 2.87e-01 85.7% 54.2%
3507639 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.56 47.0 4.41e-01 100.0% 78.6%
5056317 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.56 44.0 2.90e-01 87.5% 70.8%
3787943 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.55 43.0 2.67e-01 85.7% 50.7%
5032809 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.54 46.0 3.62e-01 100.0% 43.1%
4458694 247.1.1.2 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,RMMBL 0.53 40.0 2.74e-01 85.7% 58.8%
3704633 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.53 40.0 2.72e-01 83.9% 48.5%
3660002 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.53 40.0 2.98e-01 83.9% 74.7%
3497765 247.1.1.9 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL 0.53 40.0 2.80e-01 85.7% 64.7%
4970987 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.53 40.0 2.85e-01 85.7% 64.1%
3721062 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.53 45.0 3.94e-01 96.4% 77.6%
None — 0.53 40.0 2.55e-01 85.7% 45.8%
5029660 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.53 39.0 2.78e-01 82.1% 43.7%
3991019 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.53 40.0 3.83e-01 83.9% 78.5%
4457430 76.1.1.1 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Endotoxin_M 0.52 42.0 2.97e-01 100.0% 90.7%
3590884 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.51 42.0 3.37e-01 100.0% 82.0%
3953943 9.27.1.1 ↗ beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.51 44.0 3.59e-01 98.2% 99.1%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 42.0 4.16e-01 100.0% 91.4%
4015238 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.51 42.0 3.32e-01 96.4% 76.8%
4011732 5.1.4.446 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd, Beta-prop_WDR36-Utp21_1st 0.50 44.0 2.44e-01 100.0% 88.4%