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ON645340.1__UUG69571.1__SEA_FRANSOYER_6__00006

Bact-Vir

ON645340.1__UUG69571.1__SEA_FRANSOYER_6__00006

Identity

Accession:
ON645340 ↗
Kingdom:
phage

Quality

83.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Microbacterium_phage_Fransoyer

TaxID: 2926102

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-77
PDB
Domain cluster: rep: OP068344.1__UVG35359.1__SEA_ZAGIE_6__00006__D32-78
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.66 45.0 4.26e-01 100.0% 59.0%
6jzaA00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.60 41.0 3.51e-01 100.0% 43.2%
2w00A02 3.90.640.50 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.58 44.0 4.06e-01 91.8% 93.2%
8d3mA02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.57 39.0 2.49e-01 71.4% 19.2%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.60e-01 91.8% 83.6%
2a5yC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.05e-01 73.5% 73.9%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.56 40.0 3.66e-01 87.8% 56.5%
1ka8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.18e-01 79.6% 75.0%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.54 47.0 3.82e-01 100.0% 86.2%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.54 38.0 3.47e-01 93.9% 53.5%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.37e-01 83.7% 97.8%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.16e-01 75.5% 82.6%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 38.0 2.98e-01 77.6% 60.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 2.75e-01 75.5% 47.9%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.52 35.0 2.89e-01 71.4% 77.2%
1e29A00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.52 45.0 3.33e-01 100.0% 87.4%
2p62A01 3.40.50.10620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains 0.52 44.0 3.22e-01 100.0% 60.8%
5koxA02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.08e-01 71.4% 95.3%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.50 41.0 3.16e-01 91.8% 80.0%
1xhsA00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.50 43.0 3.31e-01 98.0% 79.6%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3240417 379.1.1.1 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 0.64 44.0 4.41e-01 100.0% 68.0%
3620499 379.1.1.3 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.64 44.0 4.82e-01 100.0% 87.5%
3245427 379.1.1.3 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.64 44.0 4.46e-01 100.0% 70.0%
3303628 822.1.1.3 ↗ a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_ATXR3 0.64 43.0 4.37e-01 100.0% 72.0%
4025551 304.24.1.3 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.59 40.0 3.26e-01 71.4% 78.9%
3236950 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 38.0 3.44e-01 93.9% 47.1%
4188115 109.4.1.1310 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N 0.58 40.0 2.21e-01 100.0% 4.4%
4025539 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.58 40.0 3.49e-01 73.5% 65.3%
3505845 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.58 46.0 3.67e-01 87.8% 99.0%
3172479 4012.4.1.0 ↗ a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain 0.57 40.0 4.12e-01 85.7% 80.0%
3553689 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.57 40.0 3.45e-01 73.5% 60.0%
3930427 4357.1.1.0 ↗ beta barrels › WWE domain › WWE domain › WWE domain 0.57 47.0 4.39e-01 100.0% 76.9%
4002798 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.57 39.0 3.52e-01 71.4% 92.9%
3627131 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 39.0 3.18e-01 77.6% 90.4%
3597842 4357.1.1.0 ↗ beta barrels › WWE domain › WWE domain › WWE domain 0.57 42.0 4.08e-01 89.8% 100.0%
3979199 3988.1.1.0 ↗ a/b three-layered sandwiches › Type III R-M system modification subunit C-terminal domain › Type III R-M system modification subunit C-terminal domain › Type III R-M system modification subunit C-terminal domain 0.56 40.0 3.32e-01 87.8% 40.0%
3616235 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 39.0 3.38e-01 71.4% 81.2%
3281207 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 43.0 3.55e-01 83.7% 98.9%
3890381 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.55 44.0 3.93e-01 100.0% 91.3%
3577575 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.55 38.0 3.33e-01 71.4% 81.2%
3164638 2006.1.1.37 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.55 38.0 2.48e-01 73.5% 52.7%
4399101 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.54 37.0 2.98e-01 73.5% 75.5%
3218434 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.54 40.0 3.48e-01 87.8% 51.2%
3846535 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.54 42.0 3.70e-01 100.0% 74.4%
3617714 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.54 41.0 3.85e-01 100.0% 89.3%
4264297 101.1.2.760 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30824 0.53 43.0 3.11e-01 87.8% 40.7%
3287274 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.26e-01 83.7% 87.0%
3865539 376.1.1.29 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 0.53 41.0 3.58e-01 100.0% 52.2%
5062701 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.53 45.0 3.59e-01 100.0% 81.9%
3738688 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.53 38.0 3.32e-01 77.6% 100.0%
3254632 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.52 40.0 3.84e-01 95.9% 96.9%
4963142 101.1.2.908 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF5787 0.52 38.0 3.33e-01 83.7% 50.7%
3243117 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.52 40.0 3.45e-01 100.0% 75.0%
4457666 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.52 39.0 3.40e-01 85.7% 85.0%
4977499 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 2.80e-01 75.5% 60.0%
3746817 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.51 40.0 3.68e-01 100.0% 100.0%
2697 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 3.04e-01 71.4% 94.8%
3912708 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.51 40.0 3.74e-01 100.0% 95.7%
3249139 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.51 40.0 3.22e-01 98.0% 84.2%
4443872 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 2.73e-01 79.6% 67.4%
5048665 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 37.0 2.51e-01 79.6% 29.3%
4943948 3987.1.1.1 ↗ a+b complex topology › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › Type III R-M system modification subunit target recognition domain › N6_N4_Mtase 0.51 35.0 3.05e-01 85.7% 42.2%
5017587 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.20e-01 81.6% 48.2%
4396408 304.20.1.5 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f 0.51 42.0 2.82e-01 95.9% 96.4%
4424248 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 40.0 3.44e-01 89.8% 56.2%