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ON645340.1__UUG69583.1__SEA_FRANSOYER_18__00018

Bact-Vir

ON645340.1__UUG69583.1__SEA_FRANSOYER_18__00018

Identity

Accession:
ON645340 ↗
Kingdom:
phage

Quality

75.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-96
PDB
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 62.0 6.73e-01 76.6% 85.2%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.82 67.0 5.80e-01 87.5% 79.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.36e-01 70.3% 69.7%
1ignB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 52.0 4.63e-01 70.3% 56.5%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.76 57.0 6.07e-01 81.2% 100.0%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.70 50.0 3.44e-01 75.0% 71.9%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 4.43e-01 73.4% 62.2%
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 44.0 4.26e-01 70.3% 68.0%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 3.60e-01 73.4% 35.7%
2cvzA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.64 44.0 3.45e-01 71.9% 81.1%
1st6A04 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.61 43.0 3.60e-01 75.0% 73.5%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 41.0 3.53e-01 70.3% 44.8%
3hrdC02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.58 39.0 3.29e-01 70.3% 89.4%
5ux1D00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 45.0 3.36e-01 93.8% 76.1%
1vq8N00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 39.0 2.88e-01 79.7% 76.3%
1m4rB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 39.0 3.02e-01 79.7% 41.8%
6i9kA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 44.0 2.86e-01 98.4% 71.3%
1na6B02 3.40.91.80 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.51 37.0 2.60e-01 79.7% 33.9%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 61.0 6.29e-01 71.9% 75.0%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.85 61.0 6.11e-01 76.6% 73.8%
3201282 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.83 56.0 5.64e-01 70.3% 70.8%
3278077 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 64.0 6.64e-01 84.4% 98.3%
3941922 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 61.0 6.53e-01 79.7% 100.0%
3442013 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.81 66.0 5.65e-01 85.9% 82.1%
4559046 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.77 71.0 5.91e-01 100.0% 78.1%
4369472 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.74 51.0 4.31e-01 71.9% 47.6%
4258132 101.1.2.27 alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind 0.72 50.0 4.37e-01 71.9% 52.6%
5044888 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 49.0 3.80e-01 71.9% 32.9%
5027549 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.71 49.0 4.54e-01 71.9% 58.7%
3781219 3985.1.1.0 alpha bundles › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) 0.71 54.0 4.40e-01 84.4% 63.2%
5045965 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.70 57.0 4.86e-01 87.5% 76.0%
4103318 182.1.2.1 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › Fe-S cluster domain of DNA primase › DNA_primase_lrg 0.68 59.0 4.66e-01 96.9% 67.4%
3304636 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.68 47.0 4.87e-01 71.9% 76.7%
5013696 101.1.2.950 alpha arrays › HTH › HTH › winged helix domain › PF29171 0.68 46.0 4.27e-01 70.3% 58.7%
5043574 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.68 58.0 4.65e-01 95.3% 68.8%
3403488 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.68 45.0 4.45e-01 70.3% 70.0%
4935112 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.67 59.0 4.86e-01 100.0% 74.2%
5057453 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.67 57.0 4.55e-01 93.8% 68.0%
5049375 182.1.2.1 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › Fe-S cluster domain of DNA primase › DNA_primase_lrg 0.66 55.0 4.38e-01 93.8% 62.2%
4494836 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.66 58.0 4.59e-01 98.4% 67.7%
5058479 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.63 43.0 4.13e-01 71.9% 62.7%
3281724 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.62 42.0 3.42e-01 71.9% 36.0%
3472889 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 41.0 4.29e-01 70.3% 75.0%
4965723 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.61 51.0 4.21e-01 93.8% 66.7%
4987454 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.61 41.0 3.76e-01 70.3% 50.0%
5027056 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 3.85e-01 73.4% 53.3%
5051451 601.28.1.0 alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.61 44.0 4.03e-01 79.7% 95.6%
D2 high residues 99-160
PDB
Domain cluster: representative
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.85 59.0 5.42e-01 100.0% 57.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.84 70.0 6.48e-01 100.0% 71.4%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.82 72.0 4.58e-01 100.0% 22.1%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.82 67.0 6.10e-01 91.9% 67.5%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.82 72.0 5.77e-01 100.0% 52.7%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.81 70.0 6.61e-01 100.0% 79.5%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 75.0 6.09e-01 100.0% 82.1%
2jexA01 1.10.287.30 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 0.79 68.0 5.78e-01 91.9% 59.4%
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.79 73.0 6.37e-01 100.0% 74.2%
1dtoA01 1.10.287.30 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 0.79 68.0 5.62e-01 91.9% 55.9%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.78 70.0 5.96e-01 100.0% 62.8%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 68.0 5.64e-01 100.0% 56.7%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.77 68.0 5.78e-01 95.2% 93.8%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 71.0 5.72e-01 100.0% 61.6%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 71.0 5.88e-01 100.0% 64.1%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.77 72.0 5.11e-01 100.0% 38.5%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.76 70.0 5.60e-01 100.0% 54.4%
1wp7A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.76 67.0 6.62e-01 93.5% 95.3%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 69.0 6.29e-01 100.0% 76.5%
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.75 69.0 4.61e-01 100.0% 33.8%
3t98B00 6.10.140.1350 Special › Helix non-globular › Helix Hairpins › 0.74 67.0 5.98e-01 100.0% 72.1%
3terA00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 68.0 5.38e-01 100.0% 52.1%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 58.0 5.43e-01 85.5% 71.6%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.72 64.0 5.67e-01 100.0% 68.9%
1zkeA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 67.0 6.04e-01 100.0% 81.5%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.70 63.0 4.33e-01 100.0% 30.8%
4nswB01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.70 61.0 4.04e-01 100.0% 23.8%
2gtaA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.69 55.0 4.68e-01 85.5% 58.8%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.68 60.0 4.30e-01 100.0% 39.9%
2xokP00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.68 61.0 5.76e-01 100.0% 98.6%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 59.0 4.95e-01 100.0% 85.3%
3cqcA00 1.20.190.50 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 0.67 59.0 3.93e-01 100.0% 25.5%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.66 58.0 5.56e-01 100.0% 86.1%
3pyoY00 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 48.0 4.84e-01 91.9% 79.0%
3i2wA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.66 56.0 3.77e-01 100.0% 24.0%
4doyA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.66 58.0 4.17e-01 100.0% 45.4%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.66 59.0 4.49e-01 100.0% 63.6%
1zvzA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.65 57.0 4.58e-01 100.0% 50.0%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.65 58.0 5.56e-01 100.0% 93.0%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.65 54.0 4.20e-01 100.0% 40.6%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 56.0 4.96e-01 100.0% 70.2%
5b7cA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 53.0 4.45e-01 98.4% 52.3%
3v5uA01 6.10.280.80 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region 0.64 57.0 5.32e-01 100.0% 84.2%
2oauA01 1.10.287.1260 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 55.0 4.68e-01 100.0% 58.8%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 53.0 4.31e-01 100.0% 48.0%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 55.0 4.64e-01 100.0% 58.2%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 54.0 4.52e-01 96.8% 68.8%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 53.0 4.66e-01 100.0% 71.7%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.63 49.0 4.34e-01 90.3% 57.9%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 50.0 5.03e-01 98.4% 90.6%
4lunU00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.62 54.0 3.46e-01 100.0% 20.9%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 51.0 4.42e-01 93.5% 58.4%
2qkdA04 2.60.120.1040 Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain 0.62 52.0 4.14e-01 93.5% 62.2%
2xgjA04 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.62 53.0 4.22e-01 100.0% 97.0%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.61 36.0 3.24e-01 75.8% 43.5%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 51.0 4.47e-01 100.0% 61.2%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.61 55.0 5.18e-01 100.0% 85.1%
1siqA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 53.0 4.02e-01 100.0% 41.3%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.61 48.0 3.93e-01 91.9% 44.7%
2pg0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 53.0 4.04e-01 100.0% 43.6%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.60 50.0 3.60e-01 100.0% 29.5%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.60 47.0 4.74e-01 100.0% 89.2%
1eg7A02 3.30.1510.10 Alpha Beta › 2-Layer Sandwich › Domain 2, N(10)-formyltetrahydrofolate synthetase › Domain 2, N(10)-formyltetrahydrofolate synthetase 0.59 41.0 3.22e-01 72.6% 51.3%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 46.0 4.38e-01 93.5% 76.3%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.57 45.0 3.60e-01 90.3% 44.4%
2a3qA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.56 46.0 3.88e-01 95.2% 53.1%
1m6nA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.56 48.0 3.80e-01 98.4% 46.7%
3bxjB03 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.56 47.0 3.28e-01 98.4% 95.4%
7oq4Z01 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.55 44.0 3.79e-01 88.7% 56.1%
3nb0B03 6.10.260.10 Special › Helix non-globular › F1FO ATP Synthase › 0.54 48.0 4.38e-01 100.0% 83.3%
3k9tA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 42.0 2.80e-01 91.9% 43.2%
2kr1A00 6.10.130.10 Special › Helix non-globular › GTP Cyclohydrolase I; Chain A, domain 1 › Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain (AZUL) 0.51 38.0 3.79e-01 85.5% 78.1%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598431 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.89 75.0 5.31e-01 100.0% 33.3%
3991133 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.88 74.0 4.93e-01 100.0% 26.2%
4612826 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.84 69.0 6.32e-01 100.0% 68.8%
5040454 3922.1.1.137 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › HisKA 0.83 69.0 6.79e-01 100.0% 84.6%
3970472 5086.1.1.84 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.82 73.0 7.03e-01 100.0% 84.3%
5029796 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.81 67.0 5.30e-01 100.0% 45.8%
3608488 603.1.1.3 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.80 75.0 5.73e-01 100.0% 50.8%
5024245 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.79 74.0 5.99e-01 100.0% 56.4%
3809724 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.79 74.0 5.53e-01 100.0% 44.3%
1581081 3017.1.1.1 alpha bundles › Alpha-helical subdomain in E2 regularoty transactivation domain › Alpha-helical subdomain in E2 regularoty transactivation domain › Alpha-helical subdomain in E2 regularoty transactivation domain › PPV_E2_N 0.79 68.0 5.80e-01 91.9% 60.0%
4941837 5069.1.1.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.79 62.0 4.78e-01 100.0% 40.0%
3181110 5086.1.1.110 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA 0.78 73.0 6.18e-01 100.0% 65.3%
3399005 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.77 70.0 6.16e-01 100.0% 88.9%
3965698 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.77 72.0 4.01e-01 100.0% 26.0%
3839778 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.77 65.0 6.66e-01 90.3% 93.3%
3757451 3755.3.1.297 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF9 0.77 64.0 4.59e-01 100.0% 34.4%
3947717 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 71.0 5.13e-01 100.0% 40.0%
3973966 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.76 68.0 5.65e-01 95.2% 59.0%
4259085 3755.4.1.66 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › MCPsignal 0.76 69.0 4.33e-01 98.4% 21.0%
3714005 5054.1.1.61 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › ELO 0.76 70.0 4.51e-01 100.0% 24.3%
4324499 3755.1.1.3 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › SPAM 0.76 71.0 5.22e-01 100.0% 45.5%
4982001 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.76 69.0 5.36e-01 98.4% 75.0%
3788311 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.75 69.0 5.53e-01 100.0% 53.9%
4417765 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.75 70.0 5.33e-01 100.0% 50.8%
3740053 4177.1.1.27 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_4 0.74 68.0 4.33e-01 100.0% 25.9%
3647336 4207.1.1.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) 0.74 63.0 4.92e-01 91.9% 45.6%
3331217 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.74 65.0 4.49e-01 100.0% 31.1%
3326073 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.74 67.0 5.42e-01 98.4% 55.5%
4297833 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.73 67.0 5.85e-01 100.0% 70.0%
3403227 192.8.1.465 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CHD5 0.73 67.0 5.47e-01 100.0% 56.4%
4337633 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 67.0 4.21e-01 100.0% 73.7%
3749676 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 68.0 4.39e-01 100.0% 25.3%
4988993 5086.1.1.231 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Rad50_zn_hook 0.73 64.0 4.85e-01 100.0% 42.0%
3930058 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.72 66.0 4.89e-01 100.0% 41.3%
3412176 174.1.1.1 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.72 65.0 4.94e-01 100.0% 44.3%
3516337 604.7.1.0 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A 0.72 65.0 5.33e-01 100.0% 56.4%
3243410 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.71 62.0 4.56e-01 96.8% 39.4%
3857357 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 65.0 5.25e-01 98.4% 78.2%
3285828 1075.4.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.71 65.0 4.00e-01 100.0% 22.2%
3487229 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.71 61.0 5.07e-01 100.0% 54.8%
3255069 5050.1.1.10 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 0.70 61.0 4.18e-01 96.8% 28.8%
4046724 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.69 58.0 4.53e-01 100.0% 43.3%
3205824 5050.1.1.15 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nodulin-like 0.68 59.0 3.99e-01 96.8% 57.9%
3609051 3748.1.1.0 extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 0.68 63.0 5.60e-01 100.0% 74.1%
4106453 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.68 59.0 5.01e-01 100.0% 59.0%
3710878 1147.1.1.2 alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › FWWh 0.68 61.0 3.98e-01 100.0% 25.7%
4868767 3559.1.1.1 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 0.68 59.0 4.67e-01 100.0% 47.3%
3230678 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.68 57.0 4.28e-01 100.0% 37.0%
3785454 4006.1.1.0 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.67 59.0 5.01e-01 100.0% 65.7%
3224526 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.67 60.0 4.49e-01 100.0% 41.3%
3235820 604.26.1.0 alpha bundles › Spectrin repeat-like › Bag6-BAG › Bag6-BAG 0.67 58.0 4.19e-01 100.0% 34.4%
3600368 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.67 58.0 4.55e-01 100.0% 48.9%
3508078 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.67 60.0 4.06e-01 100.0% 30.5%
3421046 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 4.89e-01 98.4% 64.4%
3916642 192.2.1.56 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF9 0.67 57.0 4.39e-01 100.0% 69.3%
3655694 4992.1.1.0 extended segments › RelB-like › RelB-like › RelB-like 0.66 57.0 5.23e-01 100.0% 90.6%
1507935 150.8.1.2 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › EspB_PPE 0.66 57.0 4.05e-01 100.0% 31.5%
3387160 3755.1.1.8 alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › FliJ 0.66 57.0 4.43e-01 100.0% 52.1%
4940002 223.1.1.122 a+b three layers › Profilin-like › sensor domains › sensor domains › HisKA 0.66 58.0 4.04e-01 100.0% 31.0%
3517916 2004.1.1.480 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 0.66 57.0 3.43e-01 100.0% 15.1%
3500901 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.65 56.0 4.04e-01 100.0% 34.2%
3493117 3567.1.1.79 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › Bap31 0.65 56.0 4.54e-01 100.0% 53.6%
3503725 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.65 56.0 3.94e-01 100.0% 33.0%
3594786 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.64 54.0 3.84e-01 100.0% 30.2%
3698292 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.64 55.0 4.23e-01 100.0% 55.9%
4410114 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.63 58.0 3.76e-01 100.0% 56.1%
4028853 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 53.0 3.35e-01 100.0% 16.9%
4206235 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.61 51.0 3.48e-01 100.0% 35.3%
3806665 109.4.1.1495 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26522 0.61 48.0 3.02e-01 100.0% 15.7%
3632380 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.60 52.0 3.56e-01 100.0% 62.1%
4022116 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.59 51.0 3.42e-01 100.0% 55.1%
3182185 5050.1.1.58 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.58 49.0 3.38e-01 100.0% 60.0%
3446117 109.4.1.1495 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26522 0.57 42.0 2.58e-01 100.0% 11.4%
3606213 109.4.1.21 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ENTH 0.56 44.0 3.32e-01 88.7% 34.2%
3331225 5042.1.1.0 extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region 0.55 47.0 4.57e-01 98.4% 88.6%
413595 2002.1.1.50 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase 0.50 41.0 2.59e-01 91.9% 63.4%