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ON645340.1__UUG69666.1__SEA_FRANSOYER_101__00101
Bact-VirON645340.1__UUG69666.1__SEA_FRANSOYER_101__00101
Identity
- Accession:
- ON645340 ↗
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-109
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.73 | 38.0 | 3.66e-01 | 85.4% | 46.2% |
| 1werA01 | 1.10.506.10 | Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 | 0.65 | 46.0 | 3.82e-01 | 75.0% | 85.2% |
| 4ocqA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.59 | 45.0 | 3.41e-01 | 83.3% | 83.7% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.58 | 41.0 | 3.04e-01 | 74.0% | 62.1% |
| 1a5tA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.56 | 48.0 | 4.59e-01 | 100.0% | 95.7% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 47.0 | 4.22e-01 | 100.0% | 89.7% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.55 | 46.0 | 4.61e-01 | 94.8% | 98.0% |
| 2id3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 48.0 | 4.25e-01 | 100.0% | 88.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 39.0 | 3.84e-01 | 77.1% | 84.5% |
| 3eupB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 46.0 | 3.68e-01 | 100.0% | 66.0% |
| 3lqhA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.52 | 31.0 | 3.04e-01 | 83.3% | 51.9% |
| 2vvyA01 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.52 | 44.0 | 3.97e-01 | 92.7% | 100.0% |
| 4jkzA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 45.0 | 3.78e-01 | 100.0% | 65.4% |
| 1eljA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 44.0 | 3.66e-01 | 100.0% | 97.9% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 39.0 | 3.69e-01 | 80.2% | 80.5% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 43.0 | 4.35e-01 | 97.9% | 90.7% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 40.0 | 3.55e-01 | 83.3% | 88.4% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 36.0 | 3.57e-01 | 97.9% | 71.0% |
| 3wirA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 39.0 | 2.69e-01 | 85.4% | 33.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287061 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.56 | 50.0 | 4.65e-01 | 100.0% | 93.3% |
| 4988885 | 3896.1.2.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase | 0.54 | 46.0 | 3.95e-01 | 94.8% | 98.7% |
| 3510953 | 1016.1.1.2 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Caprin-1_dimer | 0.54 | 41.0 | 3.84e-01 | 81.2% | 70.8% |
| 5032641 | 101.1.1.40 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Recombinase | 0.53 | 40.0 | 3.88e-01 | 80.2% | 77.3% |
| 5035910 | 1030.1.1.1 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Csm2_III-A | 0.53 | 40.0 | 3.60e-01 | 89.6% | 57.0% |
| 4060907 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 38.0 | 4.09e-01 | 93.8% | 92.5% |
| 4956293 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.51 | 36.0 | 3.34e-01 | 70.8% | 87.5% |
| 5053506 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.51 | 44.0 | 4.36e-01 | 99.0% | 97.1% |
| 5065913 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.51 | 44.0 | 3.50e-01 | 100.0% | 90.2% |
| 3941283 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 41.0 | 3.00e-01 | 89.6% | 31.9% |
D2
medium
residues 110-163
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.69 | 56.0 | 3.93e-01 | 92.6% | 40.2% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 56.0 | 4.21e-01 | 94.4% | 65.7% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 52.0 | 3.76e-01 | 90.7% | 29.1% |
| 4jndA02 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.65 | 48.0 | 3.06e-01 | 81.5% | 16.2% |
| 2r0yA02 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.64 | 47.0 | 3.53e-01 | 81.5% | 44.8% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.64 | 38.0 | 3.25e-01 | 81.5% | 35.2% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.64 | 50.0 | 4.33e-01 | 87.0% | 58.1% |
| 1xdpA01 | 1.20.58.310 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Polyphosphate kinase N-terminal domain | 0.63 | 52.0 | 4.24e-01 | 94.4% | 52.4% |
| 2oqoA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.63 | 44.0 | 3.14e-01 | 75.9% | 34.8% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.63 | 51.0 | 3.09e-01 | 100.0% | 12.7% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.62 | 50.0 | 4.20e-01 | 88.9% | 64.5% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.62 | 46.0 | 4.35e-01 | 87.0% | 64.8% |
| 4i43B02 | 3.30.43.40 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding domain | 0.61 | 45.0 | 3.55e-01 | 79.6% | 41.2% |
| 3wctD00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 44.0 | 3.31e-01 | 81.5% | 29.3% |
| 2b67A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.60 | 46.0 | 3.16e-01 | 85.2% | 50.5% |
| 3ejbH02 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.60 | 50.0 | 3.32e-01 | 100.0% | 45.4% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 48.0 | 4.32e-01 | 87.0% | 70.3% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.59 | 45.0 | 4.26e-01 | 83.3% | 94.0% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 2.75e-01 | 75.9% | 68.8% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.57 | 45.0 | 3.07e-01 | 94.4% | 23.4% |
| 5efrA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 37.0 | 3.39e-01 | 83.3% | 52.1% |
| 4bzaA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 36.0 | 3.29e-01 | 70.4% | 48.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595156 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.86 | 58.0 | 4.85e-01 | 70.4% | 42.2% |
| 3452742 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.82 | 58.0 | 4.28e-01 | 74.1% | 30.4% |
| 3466891 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.82 | 56.0 | 4.16e-01 | 72.2% | 29.6% |
| 3655530 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.81 | 62.0 | 4.94e-01 | 81.5% | 44.0% |
| 3298325 | 3846.1.1.0 ↗ | alpha bundles › IcmR › IcmR › IcmR | 0.79 | 57.0 | 6.16e-01 | 81.5% | 93.3% |
| 3720892 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.78 | 54.0 | 3.92e-01 | 74.1% | 27.9% |
| None | — | 0.78 | 60.0 | 3.95e-01 | 87.0% | 21.4% | |
| 3277613 | 109.3.1.157 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF222 | 0.77 | 55.0 | 3.89e-01 | 75.9% | 72.7% |
| 3504034 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.76 | 59.0 | 5.16e-01 | 83.3% | 57.5% |
| 3677427 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.75 | 50.0 | 3.90e-01 | 70.4% | 34.2% |
| 3389798 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.71 | 52.0 | 4.86e-01 | 81.5% | 65.7% |
| 5026959 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.70 | 53.0 | 4.94e-01 | 83.3% | 72.9% |
| 3645744 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.70 | 47.0 | 4.00e-01 | 75.9% | 42.2% |
| 3655557 | 148.1.1.25 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Tim17 | 0.69 | 59.0 | 4.61e-01 | 100.0% | 76.8% |
| 3319061 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.69 | 46.0 | 3.72e-01 | 70.4% | 35.5% |
| 3340355 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 46.0 | 4.25e-01 | 70.4% | 55.7% |
| 3651198 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 45.0 | 4.48e-01 | 70.4% | 67.3% |
| 3906696 | 101.1.2.725 ↗ | alpha arrays › HTH › HTH › winged helix domain › TAPR1-like | 0.67 | 53.0 | 4.16e-01 | 88.9% | 65.8% |
| 3824559 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.67 | 48.0 | 3.79e-01 | 81.5% | 34.4% |
| 3659049 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.67 | 44.0 | 4.31e-01 | 70.4% | 61.7% |
| 3327323 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.66 | 44.0 | 4.26e-01 | 70.4% | 60.0% |
| 3379261 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.64 | 44.0 | 3.89e-01 | 72.2% | 47.1% |
| 3609066 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 47.0 | 3.76e-01 | 81.5% | 38.3% |
| 3842 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.63 | 52.0 | 4.24e-01 | 94.4% | 52.4% |
| 5054424 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.62 | 47.0 | 4.29e-01 | 88.9% | 62.5% |
| 3528691 | 601.19.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3 | 0.62 | 48.0 | 3.88e-01 | 94.4% | 72.8% |
| 3214333 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.61 | 46.0 | 3.76e-01 | 87.0% | 40.9% |
| 5052725 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.61 | 44.0 | 4.04e-01 | 77.8% | 58.6% |
| 3756047 | 192.29.1.243 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Fy-3 | 0.61 | 48.0 | 4.23e-01 | 94.4% | 87.8% |
| 4176828 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.58 | 46.0 | 4.23e-01 | 87.0% | 68.6% |
| 3191712 | 3619.1.1.1 ↗ | alpha arrays › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › Nucleoporin NUP120 helical domain › NUP120_helical | 0.56 | 48.0 | 3.01e-01 | 100.0% | 38.0% |
| 4959935 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.56 | 48.0 | 3.37e-01 | 100.0% | 35.1% |
| 3573038 | 4207.1.1.99 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › PF28139 | 0.56 | 45.0 | 3.98e-01 | 100.0% | 63.3% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.55 | 44.0 | 3.99e-01 | 94.4% | 66.3% |
| 4499267 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 43.0 | 3.21e-01 | 96.3% | 50.0% |
| 4939305 | 7577.1.1.13 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SepSecS | 0.51 | 41.0 | 2.50e-01 | 90.7% | 15.2% |