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UVF62241.1
Arc-VirON649698__UVF62241.1__X__00037
Identity
- Accession:
- ON649698 ↗
- Protein ID:
- UVF62241.1 ↗
- Kingdom:
- archaea
Quality
64.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Juravirales›
Yanlukaviridae›
Sweetvirus›
Nitrososphaeria_virus_YSH_1032793
TaxID: 3071320
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-168
Domain cluster:
rep: OL597546.1__UUB23297.1__X__00001__D24-147
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4paaA05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.78 | 40.0 | 5.42e-01 | 95.2% | 93.7% |
| 3girA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.75 | 39.0 | 5.23e-01 | 95.2% | 94.9% |
| 1v5vA03 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.74 | 38.0 | 5.21e-01 | 95.2% | 97.3% |
| 1pj5A05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.74 | 38.0 | 5.08e-01 | 95.2% | 93.6% |
| 1nrkA03 | 2.40.30.160 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 36.0 | 3.95e-01 | 94.6% | 59.0% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.70 | 40.0 | 5.07e-01 | 100.0% | 95.3% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.70 | 39.0 | 4.84e-01 | 99.3% | 87.9% |
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.66 | 62.0 | 5.30e-01 | 100.0% | 75.1% |
| 4p6qA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 37.0 | 4.76e-01 | 96.6% | 100.0% |
| 1wg1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 34.0 | 4.55e-01 | 96.6% | 100.0% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.62 | 28.0 | 3.50e-01 | 95.2% | 66.7% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 36.0 | 4.44e-01 | 98.6% | 96.7% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 29.0 | 3.68e-01 | 95.9% | 77.6% |
| 3u5eU00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 36.0 | 4.26e-01 | 93.9% | 92.0% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 34.0 | 3.87e-01 | 87.1% | 79.8% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 33.0 | 3.40e-01 | 96.6% | 57.0% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.57 | 38.0 | 4.32e-01 | 93.2% | 93.3% |
| 1xtzA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 32.0 | 4.07e-01 | 94.6% | 97.6% |
| 2j5uA03 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.56 | 28.0 | 3.63e-01 | 78.2% | 86.3% |
| 1dn0D02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 32.0 | 3.76e-01 | 93.9% | 84.0% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.56 | 16.0 | 2.64e-01 | 91.8% | 63.6% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 35.0 | 4.21e-01 | 97.3% | 100.0% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.55 | 33.0 | 3.97e-01 | 95.2% | 90.6% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.55 | 29.0 | 3.36e-01 | 90.5% | 70.7% |
| 1cqkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 32.0 | 3.65e-01 | 87.1% | 79.2% |
| 7l15A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 35.0 | 3.95e-01 | 87.1% | 85.8% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.81e-01 | 86.4% | 84.3% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 37.0 | 3.57e-01 | 97.3% | 61.3% |
| 1hkfA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.78e-01 | 87.1% | 87.0% |
| 5eo9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.57e-01 | 95.2% | 80.4% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 28.0 | 3.40e-01 | 100.0% | 80.4% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 27.0 | 3.30e-01 | 95.9% | 80.2% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.50 | 43.0 | 4.47e-01 | 97.3% | 100.0% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.50 | 33.0 | 3.89e-01 | 78.2% | 98.0% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964948 | 1.1.16.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › Peptidase_S78 | 0.85 | 68.0 | 7.37e-01 | 94.6% | 97.6% |
| 3945977 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.80 | 74.0 | 7.11e-01 | 96.6% | 98.2% |
| 3602442 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.79 | 57.0 | 6.55e-01 | 86.4% | 99.1% |
| 3166306 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.78 | 71.0 | 6.99e-01 | 94.6% | 97.4% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.76 | 68.0 | 7.04e-01 | 94.6% | 100.0% |
| 4101729 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.76 | 40.0 | 5.30e-01 | 96.6% | 93.8% |
| 3954964 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.76 | 69.0 | 6.99e-01 | 96.6% | 97.2% |
| 5078561 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.76 | 41.0 | 5.04e-01 | 97.3% | 82.8% |
| 3239031 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.75 | 44.0 | 5.39e-01 | 97.3% | 89.5% |
| 4977364 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.75 | 40.0 | 5.03e-01 | 96.6% | 84.4% |
| 5047459 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.75 | 39.0 | 5.09e-01 | 96.6% | 88.2% |
| 1612800 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.75 | 42.0 | 5.12e-01 | 100.0% | 84.4% |
| 4224505 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.75 | 40.0 | 5.25e-01 | 96.6% | 95.0% |
| 3579570 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.74 | 44.0 | 5.27e-01 | 99.3% | 87.0% |
| 4025330 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.74 | 41.0 | 5.31e-01 | 99.3% | 95.3% |
| 3597274 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.73 | 40.0 | 5.28e-01 | 99.3% | 97.5% |
| 3282462 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.73 | 37.0 | 5.06e-01 | 96.6% | 96.0% |
| 4178356 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.73 | 41.0 | 5.13e-01 | 99.3% | 90.0% |
| 3795488 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.73 | 42.0 | 5.41e-01 | 98.6% | 98.8% |
| 4567015 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.73 | 40.0 | 5.26e-01 | 99.3% | 98.7% |
| 3993911 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.73 | 41.0 | 5.25e-01 | 99.3% | 95.3% |
| 5034375 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.73 | 40.0 | 5.01e-01 | 99.3% | 87.8% |
| 3997269 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.72 | 43.0 | 5.09e-01 | 97.3% | 84.5% |
| 4623083 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.72 | 38.0 | 4.80e-01 | 99.3% | 84.4% |
| 4328611 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.72 | 41.0 | 5.09e-01 | 99.3% | 91.1% |
| 4943196 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.71 | 40.0 | 5.11e-01 | 99.3% | 94.1% |
| 4072484 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.71 | 39.0 | 4.81e-01 | 97.3% | 85.6% |
| 4966046 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.71 | 40.0 | 5.15e-01 | 99.3% | 95.3% |
| 4406702 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.71 | 40.0 | 4.97e-01 | 100.0% | 90.9% |
| 4123849 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.71 | 40.0 | 5.09e-01 | 100.0% | 95.3% |
| 1165612 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.70 | 37.0 | 4.94e-01 | 99.3% | 97.4% |
| 4011585 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.70 | 37.0 | 3.69e-01 | 83.0% | 49.0% |
| 4278681 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.70 | 39.0 | 5.05e-01 | 99.3% | 95.3% |
| 4956199 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.69 | 40.0 | 4.99e-01 | 100.0% | 92.2% |
| 4078993 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.69 | 41.0 | 5.12e-01 | 99.3% | 96.7% |
| 3731068 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.68 | 39.0 | 4.51e-01 | 99.3% | 76.4% |
| 3394046 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.68 | 41.0 | 4.98e-01 | 99.3% | 92.6% |
| 3995117 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 37.0 | 4.52e-01 | 99.3% | 84.2% |
| 4927600 | 304.4.1.19 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › SCO4226-like | 0.67 | 35.0 | 4.67e-01 | 96.6% | 98.7% |
| 3568840 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.67 | 41.0 | 5.02e-01 | 99.3% | 95.8% |
| 3169216 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.66 | 42.0 | 4.41e-01 | 97.3% | 69.7% |
| 4889074 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.65 | 43.0 | 4.95e-01 | 95.2% | 89.2% |
| 4006501 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.65 | 42.0 | 4.19e-01 | 96.6% | 63.1% |
| 4913409 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.65 | 43.0 | 5.02e-01 | 95.2% | 92.5% |
| 1823202 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.65 | 41.0 | 4.76e-01 | 99.3% | 87.7% |
| 4889079 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.65 | 38.0 | 4.43e-01 | 83.7% | 80.2% |
| 4913414 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.65 | 38.0 | 4.42e-01 | 83.7% | 80.2% |
| 3286392 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.65 | 42.0 | 4.48e-01 | 93.2% | 73.8% |
| 3986531 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.64 | 43.0 | 4.44e-01 | 95.9% | 70.7% |
| 3474805 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.64 | 39.0 | 3.98e-01 | 96.6% | 61.5% |
| 3960853 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.64 | 43.0 | 4.40e-01 | 91.2% | 69.7% |
| 3748998 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.64 | 42.0 | 3.97e-01 | 96.6% | 56.1% |
| 3236827 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.63 | 44.0 | 4.71e-01 | 98.6% | 82.4% |
| 3515518 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.63 | 43.0 | 4.67e-01 | 97.3% | 81.6% |
| 3965235 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.63 | 42.0 | 4.75e-01 | 95.2% | 87.0% |
| 3965226 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.62 | 44.0 | 4.82e-01 | 96.6% | 86.4% |
| 3974130 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.62 | 42.0 | 4.75e-01 | 95.2% | 90.9% |
| 3993329 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.62 | 43.0 | 3.89e-01 | 100.0% | 52.5% |
| 2089715 | 10.47.1.1 ↗ | beta sandwiches › jelly-roll › TssK C-terminal domain › TssK C-terminal domain › T6SS_VasE | 0.62 | 41.0 | 4.36e-01 | 97.3% | 76.4% |
| 3968187 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.62 | 44.0 | 4.64e-01 | 91.2% | 81.5% |
| 4054624 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.61 | 39.0 | 4.66e-01 | 96.6% | 97.9% |
| 4913403 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.61 | 40.0 | 4.62e-01 | 87.1% | 92.3% |
| 3163728 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.61 | 43.0 | 4.87e-01 | 91.2% | 95.5% |
| 3698080 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.61 | 40.0 | 4.72e-01 | 96.6% | 95.2% |
| 4029023 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.60 | 41.0 | 4.74e-01 | 100.0% | 96.2% |
| 3739289 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.59 | 42.0 | 4.05e-01 | 95.9% | 63.5% |
| 3247986 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.58 | 44.0 | 4.52e-01 | 96.6% | 82.6% |
| 3968188 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.58 | 42.0 | 4.43e-01 | 96.6% | 82.2% |
| 3777373 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.58 | 44.0 | 4.82e-01 | 98.0% | 98.3% |
| 2066827 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.57 | 44.0 | 4.53e-01 | 97.3% | 84.9% |
| 4254150 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.55 | 44.0 | 4.69e-01 | 99.3% | 96.2% |
| 3192637 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.55 | 42.0 | 3.83e-01 | 95.9% | 61.1% |
| 3392126 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.52 | 44.0 | 3.79e-01 | 100.0% | 59.1% |
D2
high
residues 469-594
Domain cluster:
rep: OR354850.1__WNM55334.1__CoNPh27_CDS0068__00068__D76-191
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v19K02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.59 | 35.0 | 4.34e-01 | 70.6% | 98.7% |
| 2l8yA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.58 | 31.0 | 3.39e-01 | 95.2% | 60.0% |
| 3a43A01 | 3.30.2320.50 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › | 0.57 | 36.0 | 4.25e-01 | 88.9% | 97.5% |
| 2iafA00 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.52 | 43.0 | 4.16e-01 | 90.5% | 84.3% |
| 2bx2L02 | 3.40.1260.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain | 0.52 | 39.0 | 4.19e-01 | 84.1% | 92.7% |
| 4x9xA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.51 | 43.0 | 4.46e-01 | 94.4% | 100.0% |
| 1pzxA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.51 | 44.0 | 4.46e-01 | 96.0% | 100.0% |
| 3d01E00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.51 | 44.0 | 4.12e-01 | 96.8% | 84.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929755 | 2485.3.1.18 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Phage_capsid_4 | 0.85 | 78.0 | 5.79e-01 | 96.8% | 43.3% |
| 4313471 | 2485.3.1.11 ↗ | a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › SrpI-like | 0.72 | 55.0 | 4.07e-01 | 96.8% | 33.3% |
| 5029342 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.67 | 37.0 | 4.67e-01 | 72.2% | 90.7% |
| 3617520 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.63 | 38.0 | 4.69e-01 | 74.6% | 95.0% |
| 3967169 | 298.4.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › FliH | 0.60 | 38.0 | 3.89e-01 | 84.1% | 64.8% |
| 4079005 | 298.4.1.6 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › T3SS_SCTL | 0.60 | 41.0 | 4.13e-01 | 84.1% | 70.4% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.56 | 42.0 | 2.99e-01 | 81.7% | 50.9% |
| 4027960 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.55 | 30.0 | 3.70e-01 | 93.7% | 86.7% |
| 4397222 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 35.0 | 4.03e-01 | 76.2% | 92.9% |
| 3631890 | 298.3.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter | 0.55 | 41.0 | 3.80e-01 | 79.4% | 80.0% |
| 3928137 | 2484.5.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase | 0.54 | 34.0 | 3.92e-01 | 72.2% | 86.7% |
| 5011801 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 42.0 | 4.28e-01 | 93.7% | 89.6% |
| 5083788 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.52 | 43.0 | 4.25e-01 | 92.1% | 85.7% |
| 3377563 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.51 | 46.0 | 4.30e-01 | 99.2% | 91.3% |
| 4032797 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.51 | 43.0 | 4.34e-01 | 94.4% | 100.0% |
| 3903427 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.51 | 42.0 | 4.34e-01 | 94.4% | 96.5% |
| 4933257 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.51 | 45.0 | 3.37e-01 | 99.2% | 75.2% |
| 4165783 | 298.3.1.2 ↗ | a+b two layers › FwdE/GAPDH domain-like › Serine dehydratase beta chain-like › Serine dehydratase beta chain-like › PGDH_inter | 0.50 | 37.0 | 3.70e-01 | 79.4% | 73.3% |
| 3956592 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.50 | 39.0 | 3.93e-01 | 91.3% | 83.2% |
D3
medium
residues 310-332_353-388_408-468_596-623