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UVF62244.1
Arc-VirON649698__UVF62244.1__X__00040
Identity
- Accession:
- ON649698 ↗
- Protein ID:
- UVF62244.1 ↗
- Kingdom:
- archaea
Quality
69.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Juravirales›
Yanlukaviridae›
Sweetvirus›
Nitrososphaeria_virus_YSH_1032793
TaxID: 3071320
Cluster
View cluster (78 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 228-297
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.59 | 44.0 | 4.08e-01 | 82.9% | 98.9% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.57 | 39.0 | 2.97e-01 | 71.4% | 56.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3484302 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 32.0 | 2.90e-01 | 97.1% | 32.6% |
| 3943006 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.64 | 53.0 | 3.58e-01 | 95.7% | 35.9% |
| 4974053 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.61 | 42.0 | 4.12e-01 | 71.4% | 100.0% |
D2
medium
residues 51-227_319-361
Domain cluster:
rep: IMGVR_UViG_3300035312_000244-3300035312-Ga0393750_008065_4082_5470__D34-230_308-363
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fouA02 | 2.40.500.10 | Mainly Beta › Beta Barrel › Upper collar protein gp10 (connector protein) fold › Upper collar protein gp10 (connector protein) | 0.60 | 36.0 | 4.49e-01 | 86.8% | 96.2% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.57 | 32.0 | 3.64e-01 | 90.0% | 71.9% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 18.0 | 3.09e-01 | 90.5% | 98.5% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 17.0 | 3.17e-01 | 76.4% | 98.5% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.51 | 16.0 | 2.99e-01 | 88.2% | 98.3% |
| 6tmfI00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.50 | 30.0 | 3.09e-01 | 100.0% | 58.9% |
| 2ekhA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 18.0 | 2.87e-01 | 93.2% | 83.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4676609 | 4038.1.1.10 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Portal_Mu | 0.59 | 57.0 | 5.00e-01 | 100.0% | 93.4% |
| 5039294 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.58 | 56.0 | 5.12e-01 | 100.0% | 98.9% |
| 3964357 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.58 | 56.0 | 4.98e-01 | 100.0% | 97.6% |
| 5064457 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.57 | 17.0 | 2.96e-01 | 88.2% | 75.7% |
| 4954546 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.55 | 51.0 | 4.62e-01 | 97.3% | 94.5% |
| 4410228 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.54 | 51.0 | 4.69e-01 | 99.1% | 98.9% |
| 3566206 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 19.0 | 3.37e-01 | 74.5% | 100.0% |
| 5082726 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.53 | 50.0 | 4.71e-01 | 98.2% | 96.5% |
| 3269589 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.53 | 18.0 | 3.12e-01 | 80.5% | 92.9% |
| 4621153 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 18.0 | 3.04e-01 | 82.3% | 98.3% |
| 3506621 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.52 | 28.0 | 3.29e-01 | 97.3% | 70.0% |
| 4192191 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.52 | 29.0 | 3.36e-01 | 97.3% | 72.5% |
| 3527248 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 19.0 | 3.16e-01 | 73.2% | 100.0% |
| 5069062 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.51 | 17.0 | 2.96e-01 | 72.3% | 98.3% |
| 5054738 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 16.0 | 2.85e-01 | 84.5% | 98.2% |
D3
medium
residues 362-425