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UVF62394.1

Arc-Vir

ON649700__UVF62394.1__X__00049

Identity

Accession:: ON649700 ↗
Protein ID:: UVF62394.1 ↗
Kingdom:: archaea

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Juravirales› Yangangviridae› Senitvirus› Nitrososphaeria_virus_YSH_174770

TaxID: 3071322

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-79

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ga8A00	3.10.20.860	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.58	36.0	3.80e-01	78.2%	71.6%
4oelB00	2.40.50.170	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C	0.57	34.0	3.60e-01	79.5%	66.7%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3240000	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.76	43.0	4.82e-01	75.6%	73.3%
3612106	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.60	35.0	3.60e-01	78.2%	58.7%
4018649	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.57	33.0	3.43e-01	78.2%	60.0%
4779630	219.1.1.1 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1	0.57	34.0	3.60e-01	79.5%	66.7%
3746411	4.8.1.1 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo	0.54	33.0	3.35e-01	79.5%	61.3%

D2 medium residues 99-155

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1r4sA00	3.10.270.10	Alpha Beta › Roll › Urate Oxidase › Urate Oxidase;	0.79	57.0	3.50e-01	84.2%	14.6%
4bpxD00	1.20.930.80	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A ›	0.74	55.0	3.64e-01	78.9%	31.0%
1skvA00	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.73	52.0	4.96e-01	73.7%	68.8%
4abmD00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.69	52.0	4.66e-01	78.9%	59.7%
2kiwA01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.64	47.0	4.19e-01	82.5%	53.5%
1bbhA00	1.20.120.10	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562	0.64	52.0	3.84e-01	86.0%	93.1%
1br0A00	1.20.58.70	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.62	49.0	3.80e-01	86.0%	42.5%
5mmjb02	1.10.287.610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.60	40.0	4.25e-01	70.2%	76.9%
1txjA00	2.170.150.10	Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A	0.58	45.0	3.33e-01	86.0%	44.6%
2pvqA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.55	47.0	3.81e-01	93.0%	99.1%
3mgdB00	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.55	37.0	2.87e-01	75.4%	27.6%
1c0gA03	3.90.640.10	Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4	0.53	35.0	3.10e-01	71.9%	43.5%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3251657	142.1.1.5 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI	0.79	66.0	5.90e-01	93.0%	68.8%
3428929	101.1.1.138 ↗	alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD	0.69	48.0	3.91e-01	71.9%	57.0%
3598908	192.4.1.0 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p)	0.58	41.0	4.08e-01	78.9%	70.0%