←Back to structures
ON699007.1__UTQ80003.1__BC1_00051__00051
Bact-VirON699007.1__UTQ80003.1__BC1_00051__00051
Identity
- Accession:
- ON699007 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-105
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00772.27 best | DnaB | 60.8 | 1.60e-16 | 99.0% | 95.2% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r5uC00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.94 | 90.0 | 7.82e-01 | 100.0% | 71.7% |
| 6qelA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.91 | 86.0 | 7.25e-01 | 100.0% | 65.6% |
| 3bgwA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.90 | 83.0 | 7.41e-01 | 100.0% | 72.5% |
| 3gxvB00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.90 | 83.0 | 7.58e-01 | 100.0% | 76.4% |
| 2r6aC01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.83 | 77.0 | 7.75e-01 | 100.0% | 99.0% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 42.0 | 5.30e-01 | 81.4% | 100.0% |
| 2vsgA02 | 1.10.470.10 | Mainly Alpha › Orthogonal Bundle › Variant Surface Glycoprotein, subunit A; domain 2 › Variant Surface Glycoprotein, subunit A, domain 2 | 0.64 | 51.0 | 4.37e-01 | 86.6% | 94.4% |
| 3gehA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.58 | 42.0 | 3.54e-01 | 75.3% | 93.4% |
| 3lvyE01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 44.0 | 3.79e-01 | 88.7% | 64.2% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 38.0 | 4.20e-01 | 75.3% | 100.0% |
| 2j4bB00 | 1.25.40.500 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain | 0.53 | 42.0 | 3.83e-01 | 86.6% | 68.4% |
| 2nt2A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 41.0 | 3.68e-01 | 86.6% | 58.5% |
| 2oyoA02 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 45.0 | 4.17e-01 | 99.0% | 98.4% |
| 1ornA02 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.51 | 38.0 | 3.78e-01 | 100.0% | 76.0% |
| 1dvgA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.50 | 38.0 | 3.04e-01 | 82.5% | 90.7% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 34.0 | 2.79e-01 | 70.1% | 75.4% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3979830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.97 | 94.0 | 5.78e-01 | 100.0% | 21.8% |
| 3589232 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.97 | 94.0 | 5.82e-01 | 100.0% | 23.0% |
| None | — | 0.97 | 93.0 | 5.74e-01 | 100.0% | 21.8% | |
| 4522132 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.97 | 93.0 | 5.74e-01 | 100.0% | 21.8% |
| 2979225 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.96 | 93.0 | 7.31e-01 | 100.0% | 56.2% |
| 3964496 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.96 | 93.0 | 7.55e-01 | 100.0% | 61.3% |
| 4548850 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.96 | 93.0 | 5.76e-01 | 100.0% | 23.0% |
| 3965288 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.96 | 92.0 | 5.78e-01 | 100.0% | 23.3% |
| 4200873 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.96 | 92.0 | 5.74e-01 | 100.0% | 23.0% |
| None | — | 0.95 | 91.0 | 5.71e-01 | 100.0% | 23.3% | |
| 4214084 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.95 | 91.0 | 5.68e-01 | 100.0% | 22.8% |
| 4506456 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.94 | 90.0 | 7.58e-01 | 100.0% | 66.0% |
| 4272859 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.94 | 89.0 | 7.60e-01 | 100.0% | 68.3% |
| 1166510 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.93 | 89.0 | 7.14e-01 | 100.0% | 58.2% |
| 3222 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.93 | 88.0 | 8.64e-01 | 99.0% | 96.1% |
| 4339055 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.91 | 85.0 | 5.25e-01 | 100.0% | 21.1% |
| 4311479 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.91 | 87.0 | 7.03e-01 | 100.0% | 60.0% |
| 4055517 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.91 | 86.0 | 5.31e-01 | 100.0% | 20.8% |
| 1166516 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.90 | 83.0 | 7.26e-01 | 100.0% | 68.8% |
| 137909 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.90 | 83.0 | 7.59e-01 | 100.0% | 77.0% |
| 4286282 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.90 | 85.0 | 7.03e-01 | 100.0% | 63.7% |
| 1695201 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.90 | 83.0 | 6.81e-01 | 100.0% | 58.7% |
| 4494820 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.89 | 85.0 | 7.13e-01 | 100.0% | 65.3% |
| 4575830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.88 | 83.0 | 5.22e-01 | 100.0% | 23.4% |
| 4248539 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.87 | 72.0 | 6.44e-01 | 86.6% | 65.4% |
| 4132802 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.87 | 82.0 | 6.94e-01 | 100.0% | 66.0% |
| 4973693 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.85 | 79.0 | 6.52e-01 | 100.0% | 68.5% |
| 4194684 | 507.1.1.6 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB_C | 0.84 | 78.0 | 4.87e-01 | 100.0% | 22.2% |
| 4137062 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.83 | 77.0 | 6.73e-01 | 100.0% | 69.1% |
| 4083042 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.80 | 73.0 | 6.72e-01 | 100.0% | 79.2% |
| 4376809 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.80 | 74.0 | 6.44e-01 | 100.0% | 69.3% |
| 3573701 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.79 | 72.0 | 6.38e-01 | 100.0% | 70.4% |
| 4048993 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.78 | 72.0 | 6.24e-01 | 100.0% | 70.3% |
| 4009124 | 639.2.1.5 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › PF27475 | 0.68 | 41.0 | 5.24e-01 | 80.4% | 100.0% |
| 3965514 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.67 | 59.0 | 5.31e-01 | 100.0% | 75.6% |
| 4006612 | 639.2.1.1 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB | 0.62 | 46.0 | 4.93e-01 | 77.3% | 95.3% |
| 3975422 | 601.40.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › N-terminal domain in uncharacterized DUF3829-like protein › N-terminal domain in uncharacterized DUF3829-like protein | 0.58 | 45.0 | 3.87e-01 | 82.5% | 92.3% |
| 4955899 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 35.0 | 3.46e-01 | 72.2% | 59.1% |
| 4970690 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.52 | 36.0 | 3.30e-01 | 73.2% | 85.9% |
| 3232 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.52 | 44.0 | 3.67e-01 | 99.0% | 66.1% |
| 4976933 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.51 | 35.0 | 3.21e-01 | 73.2% | 87.4% |
| 5033706 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.50 | 35.0 | 3.24e-01 | 73.2% | 86.2% |