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ON699007.1__UTQ80012.1__BC1_00060__00060

Bact-Vir

ON699007.1__UTQ80012.1__BC1_00060__00060

Identity

Accession:
ON699007 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Bacillus_phage_BC-1

TaxID: 2961686

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-60
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 52.0 3.26e-01 96.2% 14.1%
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.75 63.0 4.49e-01 100.0% 32.7%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.73 65.0 4.49e-01 98.1% 76.2%
1s3rA03 3.40.30.40 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Perfringolysin 0.73 62.0 4.73e-01 100.0% 78.3%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.72 63.0 4.34e-01 100.0% 28.6%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.71 57.0 3.78e-01 90.4% 90.4%
5kkuD00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.71 62.0 3.90e-01 100.0% 38.4%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 59.0 5.32e-01 100.0% 67.1%
6accA01 2.60.120.960 Mainly Beta › Sandwich › Jelly Rolls › Spike glycoprotein, N-terminal domain 0.70 60.0 3.83e-01 100.0% 51.5%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 61.0 4.01e-01 100.0% 26.1%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.70 56.0 4.06e-01 88.5% 43.4%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.70 57.0 4.18e-01 98.1% 32.9%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.69 58.0 4.48e-01 98.1% 56.9%
5ncsA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.69 56.0 4.14e-01 90.4% 71.2%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 58.0 3.45e-01 100.0% 19.5%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 59.0 3.68e-01 100.0% 20.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 52.0 4.71e-01 98.1% 62.0%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.68 60.0 4.33e-01 100.0% 51.0%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.67 55.0 3.35e-01 96.2% 23.8%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.66 55.0 4.79e-01 100.0% 62.1%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.66 53.0 4.54e-01 94.2% 54.3%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.66 48.0 4.06e-01 80.8% 53.2%
1txkA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 56.0 3.40e-01 100.0% 14.3%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 53.0 5.16e-01 100.0% 83.3%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 58.0 3.59e-01 100.0% 66.2%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 51.0 4.19e-01 94.2% 43.8%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.65 54.0 3.79e-01 96.2% 29.8%
4ba0A04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 57.0 4.10e-01 100.0% 78.5%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 54.0 4.19e-01 98.1% 41.7%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 53.0 4.66e-01 96.2% 63.1%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 55.0 3.32e-01 100.0% 17.0%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 54.0 4.80e-01 100.0% 65.4%
4n6tA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 4.70e-01 98.1% 65.8%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.63 54.0 4.53e-01 98.1% 56.2%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.63 54.0 4.02e-01 100.0% 99.3%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.62 53.0 4.41e-01 100.0% 55.1%
1omoA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.62 54.0 3.93e-01 100.0% 36.2%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 50.0 3.62e-01 94.2% 31.5%
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.62 50.0 3.31e-01 100.0% 19.2%
1qhdA01 2.60.120.170 Mainly Beta › Sandwich › Jelly Rolls › 0.62 53.0 3.76e-01 100.0% 97.1%
3w7tA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.62 51.0 3.46e-01 100.0% 64.7%
1k38A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.62 48.0 3.21e-01 90.4% 21.8%
3zpyB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.32e-01 96.2% 25.9%
1dmlA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 50.0 3.31e-01 100.0% 50.2%
1f2uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 49.0 3.66e-01 96.2% 32.9%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.61 51.0 3.17e-01 100.0% 25.3%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 49.0 4.00e-01 96.2% 46.8%
4ifdF00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.61 51.0 3.49e-01 100.0% 48.8%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.60 52.0 3.76e-01 100.0% 51.9%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.36e-01 100.0% 49.2%
2e4mC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 42.0 3.17e-01 78.8% 62.2%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 49.0 3.14e-01 100.0% 35.4%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.58 50.0 3.44e-01 100.0% 97.4%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.58 48.0 4.69e-01 100.0% 83.3%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.58 46.0 3.94e-01 98.1% 53.5%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.57 46.0 3.65e-01 100.0% 59.7%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 45.0 3.62e-01 94.2% 74.8%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 48.0 3.57e-01 98.1% 36.6%
6g47A00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.56 48.0 3.41e-01 100.0% 97.7%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.55 46.0 3.12e-01 100.0% 40.2%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 2.94e-01 100.0% 32.4%
3auxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 46.0 2.86e-01 100.0% 28.2%
4bd4A00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.55 45.0 3.69e-01 100.0% 67.9%
4ewfA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 44.0 2.90e-01 96.2% 20.9%
1i82A00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.07e-01 100.0% 68.8%
2bzvA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.52 41.0 3.19e-01 100.0% 96.6%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3238811 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.77 67.0 4.14e-01 100.0% 18.4%
3290942 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.76 54.0 4.23e-01 75.0% 67.6%
4024938 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.75 64.0 4.38e-01 100.0% 51.6%
3206009 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.75 64.0 3.93e-01 100.0% 26.3%
4929282 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 63.0 5.62e-01 96.2% 72.0%
3448016 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 64.0 3.78e-01 100.0% 12.9%
4545039 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 62.0 5.63e-01 94.2% 74.3%
3220053 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.74 65.0 4.83e-01 100.0% 61.5%
3785654 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.73 64.0 3.63e-01 100.0% 26.5%
4929596 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 63.0 3.68e-01 100.0% 12.7%
3213551 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.73 62.0 4.77e-01 100.0% 68.0%
4022704 5.1.5.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 0.73 63.0 3.71e-01 100.0% 13.3%
3815957 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.72 62.0 3.80e-01 100.0% 15.6%
3179848 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.72 62.0 4.64e-01 100.0% 37.4%
4248012 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.72 63.0 4.62e-01 100.0% 80.0%
1140350 241.15.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.72 59.0 4.30e-01 100.0% 32.3%
5024219 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 62.0 3.63e-01 100.0% 12.5%
3712989 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.71 63.0 4.16e-01 100.0% 28.1%
5036065 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 55.0 4.92e-01 92.3% 60.0%
3802860 5.1.4.550 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.71 61.0 3.74e-01 100.0% 18.2%
None — 0.70 61.0 3.86e-01 100.0% 21.1%
3789159 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 63.0 3.61e-01 100.0% 10.8%
3221414 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.70 61.0 3.67e-01 100.0% 23.7%
3214022 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.70 60.0 4.56e-01 100.0% 66.9%
3243158 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.70 60.0 4.50e-01 100.0% 60.0%
3231376 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.70 61.0 4.58e-01 100.0% 62.3%
3303879 331.3.1.43 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C 0.70 57.0 3.81e-01 100.0% 28.7%
3216472 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.70 60.0 4.58e-01 100.0% 66.4%
3830535 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.70 60.0 3.76e-01 100.0% 19.0%
3888428 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.70 60.0 5.09e-01 100.0% 57.8%
3286735 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.69 58.0 4.99e-01 100.0% 57.6%
3242315 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.69 58.0 5.78e-01 100.0% 90.9%
3479226 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.69 59.0 4.85e-01 100.0% 55.0%
3595887 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 61.0 3.59e-01 100.0% 12.4%
3213538 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.69 57.0 4.42e-01 100.0% 66.2%
4129272 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 59.0 4.37e-01 100.0% 60.0%
5026087 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 58.0 3.47e-01 100.0% 13.6%
4108772 243.3.1.10 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 0.69 53.0 4.76e-01 100.0% 60.0%
3464481 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.69 53.0 3.16e-01 84.6% 20.0%
357364 9.10.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Uncharacterized protein bvu_3222 › Uncharacterized protein bvu_3222 › DUF4251 0.68 55.0 4.02e-01 98.1% 30.6%
3795920 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.68 59.0 4.82e-01 100.0% 74.0%
3272624 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.68 58.0 4.42e-01 100.0% 53.1%
5034824 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 60.0 3.54e-01 100.0% 19.8%
3781730 5.1.11.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Utp8_b_propeller 0.68 57.0 3.47e-01 100.0% 15.4%
3594207 243.1.1.2 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.68 56.0 4.21e-01 100.0% 45.5%
3486624 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.68 60.0 3.55e-01 100.0% 13.3%
4949068 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.67 57.0 4.57e-01 100.0% 47.3%
5038973 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 56.0 3.41e-01 100.0% 14.4%
4955671 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.67 57.0 5.05e-01 100.0% 70.0%
3214409 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.67 57.0 4.34e-01 100.0% 65.4%
3924939 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.67 56.0 4.48e-01 100.0% 54.8%
4969785 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.66 56.0 3.71e-01 100.0% 22.8%
3943894 77.1.1.7 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.66 54.0 4.15e-01 98.1% 38.4%
3438237 12.3.1.2 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.66 55.0 3.64e-01 98.1% 84.5%
3324335 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.66 52.0 3.71e-01 100.0% 27.6%
3214007 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 56.0 4.32e-01 98.1% 42.4%
3228242 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.66 55.0 4.57e-01 100.0% 61.0%
3944143 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.66 58.0 4.10e-01 100.0% 48.8%
4969674 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 56.0 3.40e-01 98.1% 26.1%
3803814 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.65 56.0 3.95e-01 100.0% 48.6%
3247634 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.65 55.0 4.18e-01 100.0% 60.0%
5025094 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 53.0 4.18e-01 100.0% 42.6%
6395 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.65 52.0 4.11e-01 98.1% 40.2%
4266402 3692.1.1.1 ↗ a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall 0.64 56.0 4.26e-01 100.0% 44.0%
3240153 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.64 52.0 4.14e-01 100.0% 66.4%
3352682 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.64 54.0 4.88e-01 98.1% 70.0%
1810786 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.64 53.0 4.84e-01 100.0% 73.0%
4556738 7503.1.1.1 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › CsgG 0.64 48.0 3.20e-01 86.5% 45.5%
5037572 4178.1.1.1 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.63 55.0 4.18e-01 100.0% 78.4%
2801583 9.2.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin 0.63 52.0 4.10e-01 98.1% 42.1%
3465186 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.63 53.0 4.02e-01 98.1% 46.2%
4978676 295.1.1.1 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.62 53.0 4.70e-01 100.0% 70.0%
3282535 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.62 53.0 3.42e-01 100.0% 57.7%
4825040 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.62 50.0 3.82e-01 100.0% 35.2%
5048249 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.62 54.0 3.39e-01 100.0% 55.4%
4033933 9.9.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB › DUF1934 0.61 49.0 3.86e-01 92.3% 45.2%
3802207 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.60 48.0 3.09e-01 100.0% 16.2%
5076441 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.60 48.0 3.16e-01 100.0% 18.8%
5064859 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.59 50.0 3.31e-01 100.0% 21.7%
1176515 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.59 46.0 3.34e-01 94.2% 27.7%
4144216 5084.5.1.63 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Coleoptericin 0.59 49.0 3.15e-01 100.0% 18.0%
5074212 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.58 49.0 3.96e-01 100.0% 55.5%
416293 2004.1.1.798 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_29 0.58 45.0 3.36e-01 94.2% 31.1%
3614247 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 47.0 3.70e-01 100.0% 42.4%
3993370 5.1.3.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.56 45.0 2.95e-01 98.1% 17.6%
1167757 2004.1.1.429 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.56 47.0 3.48e-01 100.0% 70.1%
4469406 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 48.0 3.11e-01 100.0% 20.8%
5044975 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 3.31e-01 100.0% 69.7%
3069457 1053.1.1.0 ↗ beta barrels › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain › Factor H-binding protein (fHbp) N-terminal beta-barrel domain 0.53 44.0 4.37e-01 100.0% 98.2%
D2 medium residues 82-177
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05133.20 best SPP1_portal 64.6 1.30e-17 100.0% 24.1%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3iieB03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.66 26.0 2.79e-01 83.3% 41.2%
3floB00 1.10.3200.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger 0.61 49.0 3.97e-01 85.4% 72.2%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.61 31.0 3.26e-01 91.7% 51.7%
1vt0M05 6.10.280.90 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 29.0 3.27e-01 95.8% 58.1%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 41.0 4.52e-01 91.7% 93.4%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 35.0 3.38e-01 80.2% 52.7%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.51 33.0 3.39e-01 97.9% 66.7%
2fgyA01 1.20.120.1310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain 0.51 38.0 3.73e-01 80.2% 86.0%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030791 4038.1.1.2 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_prot_Gp6 0.88 82.0 5.49e-01 100.0% 32.5%
5039294 4038.1.1.1 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.75 68.0 4.83e-01 100.0% 40.4%
4031453 4038.1.1.1 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.74 66.0 4.87e-01 100.0% 44.7%
4410228 4038.1.1.1 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.73 66.0 4.75e-01 100.0% 44.7%
3980782 4038.1.1.7 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 0.72 65.0 4.48e-01 100.0% 33.7%
3947685 4038.1.1.1 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal 0.67 61.0 4.60e-01 100.0% 54.7%
3982740 5086.1.1.190 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › OEP 0.63 48.0 3.74e-01 92.7% 38.5%
4891117 4038.1.1.11 ↗ alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › SU10_portal 0.63 52.0 3.29e-01 95.8% 15.8%
3699448 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 51.0 4.30e-01 92.7% 72.1%
3693018 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 47.0 4.09e-01 86.5% 88.7%
5023773 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.59 48.0 3.90e-01 86.5% 50.3%
4018376 601.2.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr 0.58 49.0 4.29e-01 91.7% 64.1%
4248590 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 48.0 4.91e-01 91.7% 100.0%
3784176 604.1.1.132 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KAR9 0.55 47.0 4.15e-01 94.8% 85.5%
4467359 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.55 44.0 3.57e-01 83.3% 49.4%
4065299 304.162.1.1 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.55 33.0 3.72e-01 95.8% 77.3%
4239635 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.54 42.0 3.52e-01 84.4% 51.5%
3630787 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 44.0 2.88e-01 94.8% 22.7%
5012054 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.52 32.0 3.59e-01 96.9% 82.9%
3930733 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.51 44.0 3.71e-01 95.8% 72.7%
4329890 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.51 38.0 3.36e-01 82.3% 54.0%
3288081 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.50 33.0 3.83e-01 97.9% 98.5%
D3 medium residues 186-242
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05133.20 best SPP1_portal 37.2 2.80e-09 100.0% 13.4%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ybzA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.76 60.0 5.44e-01 84.2% 84.2%
1ecmB00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.73 60.0 4.97e-01 87.7% 80.0%
3gnnA01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.65 56.0 4.22e-01 96.5% 76.1%
8hi4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.65 44.0 2.90e-01 71.9% 39.3%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 55.0 4.29e-01 100.0% 69.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3291916 2492.1.1.4 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.73 59.0 3.69e-01 89.5% 17.1%
3734862 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.65 51.0 2.99e-01 84.2% 10.5%
4832459 3291.1.1.54 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CC2D1A-B_DM14 0.61 46.0 4.43e-01 80.7% 84.6%
D4 medium residues 243-299
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 52.0 4.61e-01 78.9% 62.3%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.69 52.0 3.92e-01 80.7% 37.6%
3ztaA00 1.10.490.130 Mainly Alpha › Orthogonal Bundle › Globin-like › 0.67 54.0 3.97e-01 86.0% 89.2%
3d6jA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 40.0 3.87e-01 78.9% 68.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3201922 101.1.3.15 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-binding 0.51 34.0 3.29e-01 71.9% 60.0%