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ON724009.1__UVF60408.1__SEA_MEYRAN_56__00056
Bact-VirON724009.1__UVF60408.1__SEA_MEYRAN_56__00056
Identity
- Accession:
- ON724009 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Taxonomy
TaxID: 2970351
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-78
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5izlA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 49.0 | 3.73e-01 | 82.1% | 40.1% |
| 6w1kA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.64 | 55.0 | 3.77e-01 | 100.0% | 75.1% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.64 | 55.0 | 4.97e-01 | 100.0% | 69.8% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.63 | 57.0 | 5.13e-01 | 100.0% | 72.2% |
| 2jtyA00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.63 | 48.0 | 3.68e-01 | 82.1% | 87.0% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 47.0 | 3.70e-01 | 79.5% | 38.9% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 46.0 | 3.66e-01 | 79.5% | 38.3% |
| 3es1A01 | 2.20.70.150 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.63 | 32.0 | 4.13e-01 | 74.4% | 100.0% |
| 2bjoA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.60 | 46.0 | 4.34e-01 | 97.4% | 68.1% |
| 2clsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 44.0 | 3.44e-01 | 80.8% | 35.2% |
| 3clvA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 46.0 | 3.63e-01 | 87.2% | 41.7% |
| 6ywnA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.59 | 51.0 | 4.59e-01 | 97.4% | 74.1% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 44.0 | 4.14e-01 | 97.4% | 66.0% |
| 1x0cA01 | 2.60.350.10 | Mainly Beta › Sandwich › Dex49a from penicillium minioluteum complex, domain 1 › Dextranase, N-terminal | 0.59 | 51.0 | 4.02e-01 | 100.0% | 67.8% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 3.58e-01 | 89.7% | 45.3% |
| 8d40A03 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.57 | 48.0 | 4.44e-01 | 91.0% | 98.0% |
| 2ql8A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 46.0 | 3.79e-01 | 100.0% | 48.6% |
| 2d7vB00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 45.0 | 3.63e-01 | 97.4% | 43.8% |
| 2y27A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.57 | 44.0 | 4.02e-01 | 100.0% | 63.1% |
| 1a6jB00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.57 | 46.0 | 3.61e-01 | 100.0% | 43.3% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.57 | 45.0 | 4.00e-01 | 100.0% | 58.3% |
| 2f68X02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 3.32e-01 | 78.2% | 90.7% |
| 1i36A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 35.0 | 2.77e-01 | 100.0% | 30.8% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.55 | 49.0 | 3.88e-01 | 100.0% | 63.4% |
| 1k4nA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 49.0 | 3.76e-01 | 100.0% | 75.4% |
| 3bypA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.55 | 41.0 | 4.11e-01 | 98.7% | 76.8% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.55 | 34.0 | 3.51e-01 | 100.0% | 63.6% |
| 6vt2A03 | 2.60.40.4140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 3.85e-01 | 89.7% | 97.5% |
| 6vfqA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 40.0 | 3.57e-01 | 79.5% | 94.7% |
| 2bbhA01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.53 | 47.0 | 3.83e-01 | 100.0% | 78.8% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 47.0 | 3.21e-01 | 100.0% | 54.1% |
| 7solA02 | 3.10.290.60 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-activating enzyme E1, UFD domain | 0.53 | 40.0 | 3.73e-01 | 84.6% | 93.2% |
| 2kdnA00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.53 | 38.0 | 3.48e-01 | 98.7% | 56.5% |
| 3w5xA00 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.52 | 38.0 | 3.82e-01 | 97.4% | 77.5% |
| 5b55A01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 44.0 | 3.43e-01 | 100.0% | 87.9% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.51 | 43.0 | 3.58e-01 | 100.0% | 51.0% |
| 4wiqA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.52e-01 | 82.1% | 92.5% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.51 | 39.0 | 3.39e-01 | 98.7% | 50.7% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702873 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.70 | 54.0 | 3.78e-01 | 82.1% | 31.0% |
| 3172109 | 5095.1.1.4 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › Flocculin | 0.70 | 37.0 | 4.79e-01 | 75.6% | 100.0% |
| 3256657 | 2004.1.1.132 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC | 0.66 | 52.0 | 3.50e-01 | 84.6% | 23.7% |
| 3600530 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 50.0 | 3.77e-01 | 83.3% | 35.1% |
| 3249053 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.65 | 50.0 | 3.67e-01 | 82.1% | 33.3% |
| 3483439 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 50.0 | 3.40e-01 | 83.3% | 23.8% |
| 5000532 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.65 | 49.0 | 3.65e-01 | 82.1% | 36.1% |
| 4171840 | 316.1.1.5 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS | 0.63 | 58.0 | 4.47e-01 | 100.0% | 58.8% |
| 4961075 | 11.1.1.138 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NPCBM_assoc | 0.63 | 48.0 | 3.95e-01 | 80.8% | 77.1% |
| 3475486 | 2004.1.1.132 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC | 0.63 | 49.0 | 3.28e-01 | 85.9% | 22.0% |
| 5067896 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.63 | 47.0 | 3.63e-01 | 82.1% | 37.4% |
| 5045694 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.62 | 47.0 | 3.48e-01 | 82.1% | 34.0% |
| 3726331 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 42.0 | 4.04e-01 | 94.9% | 61.1% |
| 3633420 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.61 | 53.0 | 3.92e-01 | 100.0% | 38.2% |
| 3975967 | 11.1.1.970 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF30369 | 0.60 | 41.0 | 4.03e-01 | 70.5% | 100.0% |
| 3945514 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 3.29e-01 | 97.4% | 25.6% |
| 5069206 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.60 | 46.0 | 3.46e-01 | 82.1% | 36.3% |
| 4201757 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.60 | 52.0 | 4.34e-01 | 100.0% | 59.3% |
| 4993917 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 4.02e-01 | 80.8% | 95.5% |
| 5034595 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.59 | 54.0 | 4.11e-01 | 100.0% | 51.1% |
| 4930534 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.58 | 50.0 | 3.99e-01 | 100.0% | 48.5% |
| 3580956 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 4.52e-01 | 93.6% | 87.0% |
| 3264025 | 207.1.1.142 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8 | 0.57 | 44.0 | 2.69e-01 | 84.6% | 17.0% |
| 4228205 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.57 | 45.0 | 3.73e-01 | 96.2% | 47.9% |
| 3709715 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.84e-01 | 80.8% | 93.6% |
| 3218835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.68e-01 | 75.6% | 100.0% |
| 4958712 | 327.5.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_2 | 0.57 | 43.0 | 3.99e-01 | 100.0% | 64.0% |
| 3751898 | 145.1.1.32 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 | 0.56 | 32.0 | 3.39e-01 | 94.9% | 61.4% |
| 3971556 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.55 | 40.0 | 3.60e-01 | 98.7% | 53.9% |
| 3947813 | 316.1.1.46 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › SseB_C | 0.54 | 38.0 | 3.61e-01 | 100.0% | 59.0% |
| 5058949 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.71e-01 | 79.5% | 96.0% |
| 3439386 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.54 | 45.0 | 3.04e-01 | 100.0% | 67.5% |
| 4390756 | 311.1.1.1 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › PTS_EIIA_2 | 0.54 | 45.0 | 3.57e-01 | 100.0% | 44.2% |
| 3761923 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.53 | 37.0 | 2.78e-01 | 73.1% | 45.0% |
| 5043563 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 38.0 | 3.53e-01 | 85.9% | 59.0% |
| 3929189 | 2484.1.1.272 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF30715 | 0.53 | 48.0 | 3.53e-01 | 100.0% | 92.8% |
| 5074066 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.52 | 37.0 | 3.12e-01 | 76.9% | 46.4% |
| 4409584 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.55e-01 | 80.8% | 90.5% |
| 2130294 | 11.1.1.75 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › He_PIG | 0.51 | 38.0 | 3.55e-01 | 82.1% | 92.5% |
| 3389851 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 44.0 | 2.99e-01 | 96.2% | 35.1% |
| 4979129 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 37.0 | 3.07e-01 | 78.2% | 52.3% |
| 3781225 | 11.1.1.409 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bul1_C | 0.50 | 40.0 | 2.89e-01 | 91.0% | 91.5% |
D2
medium
residues 79-139
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2id3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 44.0 | 4.84e-01 | 77.0% | 77.6% |
| 2bg1A01 | 3.90.1310.40 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › | 0.69 | 49.0 | 4.62e-01 | 82.0% | 61.0% |
| 2iylD01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.69 | 42.0 | 4.13e-01 | 90.2% | 56.9% |
| 2nscA01 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.66 | 53.0 | 4.97e-01 | 91.8% | 100.0% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.64 | 47.0 | 3.74e-01 | 100.0% | 37.3% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 46.0 | 4.44e-01 | 80.3% | 76.1% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.62 | 39.0 | 3.66e-01 | 95.1% | 49.4% |
| 3gcgB00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.62 | 48.0 | 3.65e-01 | 86.9% | 71.7% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 42.0 | 4.54e-01 | 95.1% | 86.3% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 44.0 | 4.23e-01 | 86.9% | 67.6% |
| 3n98A01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.60 | 53.0 | 3.23e-01 | 100.0% | 24.3% |
| 3if4A02 | 1.20.5.1210 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Integron cassette protein helical domain | 0.60 | 34.0 | 3.80e-01 | 86.9% | 72.3% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 45.0 | 3.78e-01 | 85.2% | 48.0% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.60 | 41.0 | 3.57e-01 | 85.2% | 47.8% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 4.48e-01 | 85.2% | 81.7% |
| 2yy5A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.59 | 49.0 | 3.90e-01 | 95.1% | 46.2% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.58 | 38.0 | 4.23e-01 | 72.1% | 83.7% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 48.0 | 3.58e-01 | 95.1% | 87.8% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 42.0 | 4.31e-01 | 100.0% | 86.2% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.55 | 46.0 | 4.54e-01 | 95.1% | 86.6% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 43.0 | 4.10e-01 | 86.9% | 74.3% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 49.0 | 4.48e-01 | 100.0% | 80.8% |
| 4b8cJ01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.54 | 41.0 | 2.88e-01 | 83.6% | 27.1% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.53 | 45.0 | 4.21e-01 | 95.1% | 90.8% |
| 1imvA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.52 | 45.0 | 3.19e-01 | 100.0% | 32.5% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.52 | 40.0 | 3.96e-01 | 90.2% | 78.8% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.52 | 44.0 | 3.64e-01 | 96.7% | 98.2% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.51 | 45.0 | 2.75e-01 | 100.0% | 26.0% |
| 2ekgB01 | 6.10.250.3270 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 37.0 | 3.83e-01 | 83.6% | 87.5% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.50 | 44.0 | 4.11e-01 | 98.4% | 93.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3266339 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.66 | 52.0 | 5.12e-01 | 85.2% | 96.9% |
| 4948156 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.66 | 58.0 | 3.88e-01 | 100.0% | 31.8% |
| 3909150 | 5063.1.1.15 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA | 0.64 | 56.0 | 5.31e-01 | 100.0% | 86.7% |
| 4520394 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.64 | 55.0 | 5.30e-01 | 98.4% | 98.6% |
| 3347379 | 3470.1.1.26 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › DUF543 | 0.63 | 50.0 | 4.96e-01 | 100.0% | 84.6% |
| 3785168 | 7094.1.1.2 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 | 0.63 | 48.0 | 4.03e-01 | 80.3% | 76.0% |
| 4964983 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.63 | 56.0 | 4.92e-01 | 100.0% | 75.6% |
| 3987595 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.61 | 54.0 | 5.38e-01 | 98.4% | 95.3% |
| 3356655 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.61 | 45.0 | 4.31e-01 | 98.4% | 68.6% |
| 3698042 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.60 | 52.0 | 3.51e-01 | 100.0% | 26.9% |
| 4038778 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.58 | 43.0 | 3.53e-01 | 86.9% | 42.6% |
| 3724300 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 40.0 | 2.78e-01 | 80.3% | 20.5% |
| 3587991 | 2002.1.1.50 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › F_bP_aldolase | 0.56 | 48.0 | 3.17e-01 | 100.0% | 92.7% |
| 4248918 | 3826.1.1.25 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GlutR_dimer | 0.55 | 47.0 | 4.47e-01 | 100.0% | 85.3% |
| 4211233 | 4120.1.1.60 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › GlutR_dimer | 0.54 | 46.0 | 4.30e-01 | 100.0% | 81.2% |
| 4024446 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.54 | 45.0 | 3.02e-01 | 98.4% | 50.2% |
| 4302816 | 3826.1.1.25 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GlutR_dimer | 0.54 | 43.0 | 4.05e-01 | 93.4% | 80.0% |
| 4002905 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 34.0 | 3.34e-01 | 86.9% | 55.4% |
| 8997 | 2002.3.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 | 0.51 | 45.0 | 2.75e-01 | 100.0% | 26.0% |