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ON755184.1__UVF61431.1__SEA_DALANDE_17__00017

Bact-Vir

ON755184.1__UVF61431.1__SEA_DALANDE_17__00017

Identity

Accession:
ON755184 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 56-125
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26761.1 best Acb5 41.5 1.40e-10 85.7% 69.1%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.73 60.0 4.65e-01 90.0% 80.9%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.72 57.0 5.53e-01 87.1% 78.8%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.70 57.0 4.94e-01 88.6% 89.7%
1nbwA04 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.68 47.0 3.83e-01 72.9% 100.0%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.67 48.0 4.38e-01 75.7% 57.4%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 47.0 4.37e-01 74.3% 93.2%
1zhxA03 2.40.160.120 Mainly Beta › Beta Barrel › Porin › 0.66 52.0 3.80e-01 85.7% 57.6%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.65 55.0 4.43e-01 92.9% 79.4%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.64 50.0 4.05e-01 85.7% 84.2%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 50.0 3.17e-01 90.0% 51.8%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 53.0 3.82e-01 100.0% 63.0%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.61 49.0 3.45e-01 88.6% 72.5%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 52.0 3.33e-01 95.7% 55.5%
2evrA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 52.0 4.17e-01 100.0% 89.9%
3e3uA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.60 43.0 3.08e-01 74.3% 70.9%
1lmeA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.60 42.0 3.30e-01 74.3% 79.2%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 50.0 3.29e-01 94.3% 52.5%
7sf2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 40.0 3.67e-01 88.6% 52.7%
6r2wH02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 37.0 3.21e-01 90.0% 40.0%
4hjhA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.59 41.0 3.61e-01 71.4% 50.5%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 51.0 3.18e-01 95.7% 51.7%
3eweA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 50.0 3.47e-01 97.1% 64.3%
1szzA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.59 43.0 3.25e-01 77.1% 77.8%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 3.98e-01 75.7% 92.9%
1oo0A00 3.30.1560.10 Alpha Beta › 2-Layer Sandwich › Mago nashi protein › Mago nashi 0.59 45.0 3.56e-01 82.9% 98.6%
1rl4B00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.58 42.0 3.29e-01 77.1% 56.4%
3g5kA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.58 43.0 3.23e-01 80.0% 78.7%
4dokA01 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.58 48.0 3.79e-01 94.3% 87.7%
5xrkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 3.78e-01 91.4% 71.6%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 2.95e-01 91.4% 48.8%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 51.0 3.19e-01 100.0% 53.9%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.56 49.0 3.56e-01 100.0% 82.8%
4fdaA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 42.0 3.04e-01 85.7% 43.2%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.94e-01 88.6% 48.7%
2otrA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.55 38.0 3.57e-01 74.3% 56.7%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.96e-01 92.9% 51.2%
7c38B01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.55 47.0 3.13e-01 100.0% 73.7%
3i8tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.62e-01 92.9% 70.7%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.54 45.0 2.83e-01 97.1% 65.6%
2fivA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.54 36.0 3.13e-01 70.0% 74.3%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 41.0 2.55e-01 85.7% 60.7%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 47.0 2.95e-01 98.6% 64.7%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.03e-01 100.0% 95.2%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.83e-01 94.3% 47.9%
3flpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 2.98e-01 87.1% 53.5%
6fcvB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.91e-01 100.0% 63.6%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 45.0 2.95e-01 95.7% 56.2%
8gzhC01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.52 42.0 3.12e-01 88.6% 94.5%
3qu1A00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.52 42.0 3.35e-01 97.1% 80.4%
1mtpA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 41.0 3.84e-01 91.4% 90.1%
4pbpA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 2.95e-01 90.0% 53.9%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2163938 210.1.2.2 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › CBAH 0.66 59.0 3.81e-01 100.0% 73.9%
3595710 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.65 51.0 3.14e-01 85.7% 43.1%
3784394 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 46.0 2.81e-01 75.7% 47.0%
3789432 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 51.0 3.12e-01 90.0% 41.7%
3506771 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.62 51.0 3.32e-01 91.4% 54.6%
4861416 5.1.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.62 48.0 3.08e-01 85.7% 52.6%
3565994 5.1.4.137 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nbas_N 0.62 49.0 2.99e-01 88.6% 39.4%
None 0.61 49.0 3.23e-01 88.6% 48.0%
3485926 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 48.0 2.68e-01 90.0% 21.1%
None 0.60 48.0 3.18e-01 88.6% 48.4%
3409045 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.60 49.0 3.04e-01 90.0% 43.4%
4086694 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.60 43.0 3.41e-01 77.1% 62.0%
4336204 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.60 43.0 3.22e-01 77.1% 74.1%
3266202 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 49.0 3.11e-01 91.4% 40.0%
4030761 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.60 43.0 3.34e-01 77.1% 57.5%
3212116 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.60 49.0 3.16e-01 91.4% 44.4%
4133607 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.59 43.0 3.31e-01 77.1% 58.7%
None 0.59 48.0 3.28e-01 88.6% 57.8%
4681334 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.59 50.0 3.46e-01 97.1% 55.3%
168447 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.59 43.0 3.16e-01 77.1% 51.6%
3643064 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.58 50.0 3.62e-01 97.1% 82.9%
3787816 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 45.0 2.93e-01 88.6% 40.8%
3960667 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 46.0 3.80e-01 90.0% 91.1%
4406935 4099.1.1.19 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM8 0.57 44.0 3.30e-01 82.9% 33.1%
4628922 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.57 40.0 3.03e-01 74.3% 76.0%
3229459 10.1.1.92 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26430 0.57 44.0 3.27e-01 84.3% 73.2%
3333777 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 48.0 3.28e-01 94.3% 61.2%
3239473 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.57 44.0 2.91e-01 88.6% 70.1%
3253996 5.1.5.73 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.57 49.0 3.15e-01 98.6% 55.8%
2391102 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 48.0 2.99e-01 95.7% 44.6%
3299546 5.1.3.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.56 45.0 3.38e-01 90.0% 80.0%
3335902 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.56 44.0 2.85e-01 87.1% 83.5%
4124150 5.1.3.154 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 0.56 44.0 2.78e-01 88.6% 53.3%
3786448 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.56 47.0 3.01e-01 95.7% 61.3%
3714170 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.56 46.0 2.77e-01 92.9% 40.8%
3444104 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 3.06e-01 95.7% 62.8%
3775191 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 46.0 2.60e-01 92.9% 19.4%
3852105 63.1.1.8 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH, PRKCSH_1 0.55 44.0 3.64e-01 90.0% 74.1%
3773695 63.1.1.3 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH 0.55 44.0 3.63e-01 90.0% 74.1%
3676555 5.1.11.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 0.55 48.0 2.76e-01 100.0% 39.2%
3739251 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 46.0 2.85e-01 100.0% 48.7%
4975450 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.55 47.0 3.97e-01 95.7% 83.9%
3592256 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 2.98e-01 98.6% 74.6%
3613906 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 47.0 3.02e-01 98.6% 53.1%
3659657 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 48.0 2.81e-01 100.0% 22.3%
4572902 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.55 45.0 2.81e-01 91.4% 87.1%
4948661 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.54 46.0 3.82e-01 98.6% 70.8%
4654713 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.54 44.0 3.60e-01 95.7% 66.2%
3359034 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.54 43.0 3.10e-01 92.9% 76.2%
3494647 4099.1.1.20 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14_RM6 0.54 40.0 3.92e-01 84.3% 73.8%
3172425 5.1.4.172 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 0.53 42.0 2.70e-01 92.9% 61.9%
3683659 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.52 45.0 3.02e-01 100.0% 95.7%
4025611 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.69e-01 95.7% 50.2%
3482007 5.1.4.254 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.52 42.0 2.66e-01 92.9% 47.1%
3247159 63.1.1.8 beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH, PRKCSH_1 0.52 43.0 3.42e-01 100.0% 75.7%
4977279 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.52 44.0 3.69e-01 100.0% 68.9%
3276058 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.52 44.0 3.39e-01 97.1% 87.1%
5001443 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.52 44.0 3.69e-01 100.0% 70.8%
3789341 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 40.0 2.63e-01 87.1% 72.9%
5049456 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.51 42.0 3.52e-01 100.0% 67.9%
981342 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.50 41.0 3.11e-01 92.9% 78.0%
3277314 5.1.4.482 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_WDR75_2nd 0.50 42.0 2.72e-01 98.6% 75.7%
3884500 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.50 43.0 3.15e-01 100.0% 54.9%