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ON758385.1__USV40837.1__X__00011
Bact-VirON758385.1__USV40837.1__X__00011
Identity
- Accession:
- ON758385 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-34_200-284
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 35.0 | 3.74e-01 | 87.0% | 65.6% |
| 3cniA00 | 3.40.1710.10 | Alpha Beta › 3-Layer(aba) Sandwich › abc type-2 transporter like fold › abc type-2 transporter like domain | 0.59 | 43.0 | 3.88e-01 | 75.0% | 80.7% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 29.0 | 3.25e-01 | 89.8% | 62.8% |
| 1mhyD00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.54 | 42.0 | 2.74e-01 | 84.3% | 39.0% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 27.0 | 3.15e-01 | 84.3% | 69.3% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 42.0 | 3.33e-01 | 90.7% | 76.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3698887 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.66 | 48.0 | 3.04e-01 | 75.0% | 18.9% |
| 5020161 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.59 | 45.0 | 3.94e-01 | 80.6% | 70.7% |
| 3718871 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 42.0 | 3.06e-01 | 73.1% | 83.7% |
| 4147965 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.56 | 45.0 | 3.40e-01 | 84.3% | 63.2% |
| 3198423 | 5000.6.1.0 ↗ | alpha arrays › Toxins' membrane translocation domains › Tethering factor for nuclear proteasome cut8 › Tethering factor for nuclear proteasome cut8 | 0.56 | 40.0 | 3.22e-01 | 75.0% | 73.8% |
| 3787847 | 109.4.1.2220 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30130 | 0.56 | 47.0 | 2.66e-01 | 89.8% | 21.7% |
| 3733217 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.56 | 38.0 | 3.42e-01 | 70.4% | 62.0% |
| 4659393 | 109.4.1.937 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EDRF1 | 0.55 | 45.0 | 3.11e-01 | 89.8% | 51.9% |
| 5005387 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 42.0 | 3.24e-01 | 81.5% | 55.9% |
| 4951571 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 42.0 | 3.16e-01 | 81.5% | 52.7% |
| 3184587 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.53 | 41.0 | 2.69e-01 | 81.5% | 33.9% |
| 3923659 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.53 | 38.0 | 4.06e-01 | 90.7% | 84.2% |
| 4271117 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.52 | 27.0 | 3.04e-01 | 88.0% | 62.4% |
| 4248498 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.50 | 42.0 | 3.97e-01 | 89.8% | 86.2% |
D2
high
residues 43-188
Domain cluster:
rep: BML_coassembly_scaffold_234_prodigal-single.1__X__X__00197__D302-449
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6imjA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.66 | 49.0 | 4.46e-01 | 100.0% | 59.0% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 26.0 | 3.80e-01 | 82.9% | 86.2% |
| 2z5bA00 | 3.30.230.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.60 | 32.0 | 3.46e-01 | 100.0% | 58.3% |
| 6p0cA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.60 | 48.0 | 5.08e-01 | 100.0% | 97.6% |
| 2cfmA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.57 | 45.0 | 4.08e-01 | 100.0% | 60.7% |
| 1lqvB00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.55 | 51.0 | 4.79e-01 | 98.6% | 86.7% |
| 4mp4A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 24.0 | 2.92e-01 | 87.0% | 67.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4914243 | 206.1.3.116 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M, DNA_ligase_A_C | 0.60 | 48.0 | 4.25e-01 | 100.0% | 60.0% |
| 3704759 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.59 | 48.0 | 4.06e-01 | 100.0% | 52.1% |
| 3434631 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.56 | 39.0 | 4.14e-01 | 82.2% | 79.8% |
| 3944717 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 40.0 | 3.37e-01 | 82.2% | 50.8% |