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ON758385.1__USV40889.1__X__00063

Bact-Vir

ON758385.1__USV40889.1__X__00063

Identity

Accession:
ON758385 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 17-68
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cfvA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.74 62.0 4.94e-01 94.2% 72.9%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.74 50.0 4.79e-01 90.4% 60.7%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.73 52.0 3.16e-01 96.2% 12.2%
2vt8A00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.72 59.0 4.31e-01 92.3% 67.1%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.71 52.0 3.75e-01 90.4% 27.5%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 54.0 4.86e-01 90.4% 62.0%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.69 54.0 4.21e-01 88.5% 52.5%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 56.0 4.23e-01 90.4% 91.1%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 55.0 3.48e-01 86.5% 55.0%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.67 54.0 4.16e-01 88.5% 51.7%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.67 46.0 3.52e-01 90.4% 29.8%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.66 58.0 4.04e-01 100.0% 56.7%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.66 51.0 4.04e-01 88.5% 79.7%
1fx5B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 50.0 3.28e-01 84.6% 60.7%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 50.0 3.42e-01 84.6% 54.9%
7rpyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 59.0 4.68e-01 100.0% 87.4%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.66 58.0 4.28e-01 100.0% 68.9%
3p24A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.66 57.0 4.13e-01 100.0% 73.9%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 48.0 2.96e-01 96.2% 12.4%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.65 52.0 4.55e-01 98.1% 57.1%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.65 57.0 3.93e-01 100.0% 61.0%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 55.0 3.17e-01 96.2% 37.7%
1nkgA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 55.0 3.57e-01 98.1% 77.7%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.64 45.0 3.91e-01 92.3% 45.5%
2bs6A01 2.40.128.190 Mainly Beta › Beta Barrel › Lipocalin › 0.64 51.0 4.46e-01 92.3% 89.3%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.64 51.0 3.28e-01 92.3% 28.1%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.64 47.0 2.86e-01 92.3% 11.9%
2wc7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.64 53.0 4.59e-01 92.3% 91.1%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.63 52.0 4.69e-01 92.3% 70.4%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.62 53.0 3.30e-01 100.0% 37.1%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 3.93e-01 98.1% 50.7%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.02e-01 94.2% 25.1%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.62 50.0 4.06e-01 92.3% 73.1%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.62 50.0 3.61e-01 90.4% 38.0%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.62 51.0 3.98e-01 98.1% 65.3%
1gjwA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 49.0 4.54e-01 90.4% 98.5%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.61 49.0 3.32e-01 94.2% 77.4%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 50.0 3.21e-01 94.2% 27.8%
3zssA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 49.0 4.19e-01 92.3% 98.9%
2jhnA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.60 43.0 3.47e-01 80.8% 36.3%
4ozuA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 49.0 3.04e-01 96.2% 26.2%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 53.0 4.25e-01 100.0% 85.3%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 52.0 3.84e-01 100.0% 56.7%
3lm3A02 3.30.1120.110 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 51.0 4.07e-01 98.1% 88.8%
4nkbA01 3.30.1120.120 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 48.0 3.87e-01 94.2% 60.5%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.60 50.0 3.27e-01 100.0% 63.6%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.60 50.0 3.69e-01 100.0% 80.3%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.60 49.0 3.30e-01 92.3% 58.8%
1lf7A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 48.0 3.57e-01 100.0% 72.0%
1l0qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.06e-01 94.2% 25.6%
1mpgA01 3.30.310.20 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain 0.59 49.0 3.93e-01 100.0% 45.5%
1epaA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 3.58e-01 100.0% 83.1%
5upiA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.58 48.0 3.38e-01 98.1% 50.5%
2ntkB00 3.60.20.20 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like 0.58 44.0 3.06e-01 86.5% 65.3%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 46.0 3.47e-01 96.2% 57.0%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.82e-01 94.2% 21.1%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 45.0 3.77e-01 92.3% 76.5%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.57 42.0 3.71e-01 86.5% 62.9%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 46.0 4.08e-01 94.2% 62.5%
2pmlX01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 43.0 3.44e-01 92.3% 73.4%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 42.0 2.67e-01 92.3% 21.8%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027842 5.1.3.117 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.83 59.0 3.52e-01 92.3% 11.5%
4436049 1190.1.1.1 a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF 0.82 60.0 4.81e-01 84.6% 41.0%
3479716 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.78 63.0 5.30e-01 98.1% 54.1%
3588455 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.75 56.0 5.11e-01 86.5% 60.0%
2998372 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.75 59.0 5.92e-01 100.0% 84.9%
3984091 3180.1.1.1 a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG 0.75 51.0 4.11e-01 92.3% 36.2%
3649824 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.74 53.0 3.23e-01 92.3% 12.3%
3540949 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 54.0 3.34e-01 92.3% 14.1%
3280245 9.4.1.0 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.74 58.0 4.60e-01 86.5% 64.8%
3659226 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.73 52.0 3.42e-01 92.3% 17.4%
3283603 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 56.0 4.72e-01 82.7% 82.4%
3238997 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.72 58.0 4.28e-01 88.5% 98.5%
3186839 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 61.0 3.61e-01 94.2% 18.9%
1171964 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.72 50.0 4.88e-01 90.4% 67.2%
5054123 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.72 54.0 4.92e-01 90.4% 61.4%
5019907 5.1.5.233 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PD40 0.71 52.0 3.21e-01 100.0% 13.4%
5014688 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 50.0 4.95e-01 90.4% 70.9%
1400361 5.1.3.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5128 0.71 59.0 3.53e-01 92.3% 31.9%
3673032 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 49.0 4.53e-01 75.0% 72.9%
3999576 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.71 62.0 4.51e-01 100.0% 77.9%
5001101 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.70 48.0 4.64e-01 88.5% 61.7%
1148074 3400.1.1.1 a+b complex topology › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Membrane-associated protein VP24 › Filo_VP24 0.70 53.0 3.53e-01 84.6% 23.4%
3394516 241.15.1.2 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N 0.70 57.0 4.16e-01 92.3% 66.0%
3817220 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.70 54.0 3.36e-01 86.5% 94.8%
3979195 274.1.1.35 a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 0.70 57.0 4.39e-01 94.2% 52.0%
3519579 295.1.1.20 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Intu_longin_3 0.69 55.0 4.85e-01 90.4% 66.3%
1171961 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.69 49.0 4.61e-01 90.4% 61.9%
5791 295.1.1.6 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.69 54.0 4.22e-01 88.5% 52.9%
3821429 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.69 56.0 3.99e-01 90.4% 75.6%
4400911 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.69 49.0 5.37e-01 98.1% 100.0%
3584281 12.3.1.13 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.69 57.0 3.58e-01 94.2% 89.0%
3765027 5.1.4.85 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.69 58.0 3.48e-01 96.2% 25.1%
5014686 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.69 48.0 4.81e-01 92.3% 72.7%
3892482 883.1.1.10 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_C2CD2L 0.69 54.0 3.63e-01 88.5% 52.9%
4285199 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.68 54.0 4.52e-01 100.0% 49.5%
None 0.68 57.0 3.14e-01 94.2% 11.6%
3474457 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.68 52.0 4.30e-01 84.6% 52.6%
3779299 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.68 56.0 3.14e-01 94.2% 11.9%
5014687 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 49.0 4.65e-01 92.3% 64.6%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.67 59.0 4.39e-01 100.0% 52.3%
4140248 5.1.4.577 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YqgU 0.67 57.0 3.45e-01 94.2% 27.4%
3471615 220.1.1.158 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.67 54.0 4.19e-01 90.4% 67.0%
5062107 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 50.0 3.17e-01 96.2% 14.7%
5014685 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 46.0 4.36e-01 90.4% 60.0%
5039218 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.66 54.0 4.07e-01 92.3% 93.8%
5010773 12.3.1.74 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N 0.66 58.0 3.77e-01 100.0% 60.0%
2833238 12.1.1.18 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF3459 0.65 52.0 4.90e-01 88.5% 98.4%
3814457 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.65 54.0 3.31e-01 92.3% 30.2%
3592221 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 55.0 4.24e-01 96.2% 63.6%
5014277 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.65 52.0 4.48e-01 92.3% 55.3%
3484246 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.65 53.0 3.20e-01 94.2% 18.7%
3981185 241.1.1.25 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 0.64 49.0 3.95e-01 88.5% 73.9%
3782489 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 54.0 3.11e-01 96.2% 18.2%
3388787 719.1.1.1 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XRCC4 0.63 55.0 4.16e-01 98.1% 96.0%
3194130 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.63 51.0 3.08e-01 94.2% 20.3%
3242741 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.63 47.0 3.04e-01 86.5% 16.3%
4960423 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 51.0 3.11e-01 92.3% 17.0%
4957480 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.63 53.0 3.15e-01 94.2% 17.1%
2702181 5.1.4.9 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ,PQQ_2 0.63 52.0 3.06e-01 94.2% 21.8%
3940325 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 52.0 3.31e-01 94.2% 30.8%
5014493 331.3.1.12 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like 0.63 54.0 3.58e-01 100.0% 27.4%
1140096 5.1.3.37 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › YqgU 0.63 53.0 3.21e-01 94.2% 27.6%
5051538 298.1.1.8 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.62 51.0 3.28e-01 96.2% 77.8%
4991507 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 50.0 3.11e-01 94.2% 23.5%
3739528 5.1.3.19 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira 0.61 49.0 3.38e-01 94.2% 47.3%
3972580 331.1.1.3 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AlkA_N 0.61 49.0 4.37e-01 100.0% 61.3%
3962450 9.27.1.0 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.61 52.0 4.21e-01 100.0% 71.4%
3463667 5.1.3.144 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.61 53.0 3.25e-01 100.0% 15.8%
3291828 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.61 50.0 3.05e-01 94.2% 14.9%
5014009 11.1.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.61 50.0 3.58e-01 92.3% 66.3%
3831470 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.61 51.0 3.25e-01 98.1% 75.4%
4969372 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 48.0 2.75e-01 92.3% 12.4%
3953943 9.27.1.1 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH › Myco_19_kDa 0.60 50.0 4.06e-01 100.0% 80.9%
4951804 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.60 48.0 3.59e-01 92.3% 40.7%
3972316 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.60 43.0 4.07e-01 100.0% 63.1%
3276429 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.59 49.0 3.05e-01 94.2% 25.8%
5039195 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.59 50.0 3.29e-01 94.2% 39.5%
3733356 298.1.1.25 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C 0.59 49.0 3.54e-01 98.1% 64.8%
3605569 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.58 47.0 2.90e-01 94.2% 22.3%
3507129 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 48.0 3.45e-01 98.1% 44.1%
4970248 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 45.0 3.06e-01 90.4% 45.6%
3793430 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.57 46.0 3.90e-01 96.2% 62.1%
5012108 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 36.0 2.37e-01 84.6% 36.7%
D2 medium residues 69-147
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.71 60.0 5.78e-01 92.4% 93.2%
2cpmA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.70 56.0 5.33e-01 100.0% 73.4%
3pieA02 3.30.1370.250 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.68 58.0 5.40e-01 94.9% 77.0%
2cxaA01 3.30.70.3550 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain 0.67 44.0 4.98e-01 87.3% 90.0%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.67 53.0 5.60e-01 91.1% 98.6%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.65 51.0 5.15e-01 94.9% 88.3%
3fixA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 50.0 3.96e-01 98.7% 40.0%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.65 52.0 5.39e-01 88.6% 100.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.64 52.0 5.18e-01 88.6% 91.4%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.64 50.0 5.28e-01 98.7% 98.6%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.26e-01 88.6% 98.6%
1wj5A01 1.10.10.980 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain 0.63 55.0 5.20e-01 98.7% 99.0%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 5.17e-01 92.4% 97.1%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 46.0 4.89e-01 91.1% 91.2%
1xb4B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 5.07e-01 88.6% 100.0%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.80e-01 87.3% 88.0%
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.60 51.0 4.78e-01 97.5% 76.2%
3lcvB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 44.0 3.31e-01 84.8% 30.7%
2d9iA00 3.30.1370.110 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.60 49.0 4.70e-01 100.0% 77.1%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.28e-01 89.9% 70.2%
1yreC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 51.0 3.96e-01 100.0% 43.4%
3v3kD00 1.20.1260.90 Mainly Alpha › Up-down Bundle › Ferritin › 0.58 52.0 4.09e-01 100.0% 82.3%
6sulA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.58 47.0 3.55e-01 93.7% 91.1%
1wihA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 42.0 4.13e-01 97.5% 72.6%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.78e-01 91.1% 100.0%
2pcrA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.57 40.0 3.56e-01 83.5% 50.4%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 46.0 3.97e-01 89.9% 78.7%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 4.35e-01 88.6% 81.0%
7z47G01 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 34.0 3.60e-01 73.4% 67.1%
4qc6A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 48.0 3.75e-01 98.7% 43.6%
1hxmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 3.36e-01 72.2% 59.5%
3va7A05 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.55 38.0 3.58e-01 77.2% 58.0%
4ofzA03 3.30.70.3080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.99e-01 82.3% 86.5%
1pp8O00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.88e-01 83.5% 80.4%
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 35.0 3.72e-01 89.9% 83.1%
6lebA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 45.0 3.83e-01 100.0% 63.3%
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.52 44.0 3.04e-01 100.0% 93.5%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 34.0 3.37e-01 72.2% 61.4%
2uvaG03 3.30.70.3320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 3.29e-01 72.2% 58.3%
5xyjA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 43.0 3.53e-01 94.9% 87.3%
6kvrA01 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.51 41.0 2.55e-01 92.4% 83.1%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.51 35.0 3.35e-01 73.4% 63.5%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3596513 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.75 58.0 5.56e-01 91.1% 72.2%
3698585 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.73 54.0 5.40e-01 86.1% 77.5%
3552466 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 56.0 5.86e-01 93.7% 94.3%
3218484 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 56.0 5.86e-01 96.2% 97.1%
3408002 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.71 40.0 3.56e-01 100.0% 40.9%
3737985 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.70 55.0 5.12e-01 94.9% 67.0%
3740807 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.70 54.0 5.28e-01 94.9% 77.6%
5051083 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.69 55.0 5.41e-01 87.3% 84.7%
4937013 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.68 56.0 5.79e-01 94.9% 97.3%
4158753 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.67 56.0 5.64e-01 100.0% 92.3%
4677493 2003.1.5.293 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NAD-bd_HRPKS_sdrA 0.67 47.0 3.04e-01 98.7% 15.8%
5046509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 5.64e-01 96.2% 94.7%
4103583 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.67 48.0 4.01e-01 100.0% 42.1%
3370279 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.66 53.0 5.30e-01 89.9% 84.3%
3182652 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 56.0 5.62e-01 94.9% 96.2%
5016597 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.66 54.0 5.02e-01 98.7% 70.5%
4562408 101.1.2.76 alpha arrays › HTH › HTH › winged helix domain › CtsR 0.66 52.0 5.29e-01 86.1% 92.0%
4941238 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 5.49e-01 92.4% 100.0%
5031186 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.65 54.0 5.54e-01 96.2% 97.3%
5068345 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.40e-01 92.4% 98.6%
4979663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 5.46e-01 97.5% 92.5%
4228350 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.65 49.0 5.32e-01 92.4% 100.0%
5027800 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.64 51.0 5.30e-01 92.4% 98.6%
3357930 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.64 49.0 5.00e-01 93.7% 88.0%
4027635 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.63 53.0 5.39e-01 98.7% 98.7%
4030596 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.85e-01 86.1% 96.5%
3978632 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.62 48.0 4.10e-01 100.0% 50.8%
3239585 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.61 48.0 4.97e-01 87.3% 100.0%
5010793 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.61 45.0 4.65e-01 88.6% 84.0%
4274495 246.3.1.2 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › RNase_E_G 0.61 53.0 4.69e-01 100.0% 70.0%
4975425 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.61 50.0 4.78e-01 96.2% 78.9%
3167635 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.60 50.0 4.39e-01 92.4% 91.7%
4008670 101.1.2.783 alpha arrays › HTH › HTH › winged helix domain › PF30336 0.60 48.0 5.06e-01 92.4% 100.0%
3504793 101.1.2.490 alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 0.60 49.0 4.93e-01 91.1% 98.8%
4560455 246.3.1.2 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › RNase_E_G 0.60 53.0 4.59e-01 100.0% 68.0%
5030899 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 46.0 4.80e-01 91.1% 95.7%
3743748 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 44.0 4.29e-01 92.4% 71.1%
4028119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.87e-01 88.6% 100.0%
4592151 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 46.0 3.11e-01 87.3% 54.5%
4025592 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.59 45.0 4.08e-01 86.1% 60.0%
5077786 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.58 45.0 4.47e-01 88.6% 78.8%
3411130 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.58 51.0 4.60e-01 100.0% 90.0%
3923802 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.57 46.0 4.44e-01 98.7% 77.9%
3494198 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.57 49.0 3.75e-01 97.5% 94.7%
4186742 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.57 44.0 4.57e-01 100.0% 97.1%
4995792 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.56 43.0 3.27e-01 83.5% 36.7%
3493663 327.11.2.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.56 38.0 3.20e-01 72.2% 69.0%
3178249 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.55 43.0 3.32e-01 86.1% 48.6%
3595934 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.46e-01 84.8% 45.2%
4938704 101.1.2.750 alpha arrays › HTH › HTH › winged helix domain › PF27374 0.54 42.0 3.97e-01 93.7% 68.0%
4977291 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.54 41.0 3.60e-01 83.5% 54.4%
3423154 213.1.1.73 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › IDM1_C 0.54 46.0 4.07e-01 98.7% 64.2%
3334025 1.1.7.68 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GUB_WAK_bind 0.54 38.0 3.47e-01 86.1% 55.2%
4943951 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.53 41.0 3.50e-01 86.1% 48.6%
4659379 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.53 40.0 4.23e-01 86.1% 97.1%
4991637 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.53 39.0 2.89e-01 81.0% 29.6%