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ON758385.1__USV40986.1__X__00160
Bact-VirON758385.1__USV40986.1__X__00160
Identity
- Accession:
- ON758385 ↗
- Kingdom:
- phage
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-90
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.77 | 60.0 | 4.33e-01 | 82.0% | 38.5% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.71 | 52.0 | 3.48e-01 | 78.7% | 54.1% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.69 | 52.0 | 4.13e-01 | 80.3% | 55.0% |
| 1sg7A00 | 1.10.1740.70 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB | 0.67 | 52.0 | 4.89e-01 | 85.2% | 81.3% |
| 2yguC00 | 1.10.238.190 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.67 | 44.0 | 3.57e-01 | 72.1% | 35.6% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 46.0 | 3.52e-01 | 75.4% | 30.8% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.65 | 45.0 | 3.92e-01 | 70.5% | 82.2% |
| 2kseA00 | 1.20.5.1040 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. | 0.65 | 49.0 | 4.62e-01 | 83.6% | 83.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 47.0 | 4.65e-01 | 77.0% | 96.9% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.65 | 45.0 | 4.12e-01 | 75.4% | 56.5% |
| 6lo8F01 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.64 | 47.0 | 4.56e-01 | 80.3% | 79.7% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.63 | 45.0 | 4.43e-01 | 75.4% | 76.1% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.62 | 44.0 | 4.33e-01 | 75.4% | 94.0% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.62 | 47.0 | 4.23e-01 | 80.3% | 80.5% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.60 | 49.0 | 4.77e-01 | 90.2% | 88.2% |
| 1bhpA00 | 3.30.1350.10 | Alpha Beta › 2-Layer Sandwich › Crambin › Thionin-like | 0.60 | 38.0 | 4.38e-01 | 93.4% | 86.7% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.59 | 46.0 | 4.43e-01 | 88.5% | 89.2% |
| 2x9xA04 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 41.0 | 4.36e-01 | 73.8% | 100.0% |
| 3nxaB00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 42.0 | 3.69e-01 | 77.0% | 48.5% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.59 | 45.0 | 3.31e-01 | 86.9% | 96.2% |
| 6g94A00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.58 | 44.0 | 3.19e-01 | 80.3% | 44.2% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 46.0 | 3.82e-01 | 91.8% | 73.3% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 43.0 | 3.89e-01 | 83.6% | 76.1% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.58 | 41.0 | 3.75e-01 | 75.4% | 67.1% |
| 7lb8B02 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.57 | 47.0 | 3.08e-01 | 96.7% | 51.3% |
| 1jb0K00 | 1.20.860.20 | Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre | 0.57 | 40.0 | 4.43e-01 | 77.0% | 100.0% |
| 7c4sB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 47.0 | 3.14e-01 | 96.7% | 60.5% |
| 2ahmG01 | 6.10.250.2820 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 41.0 | 3.55e-01 | 78.7% | 58.6% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 43.0 | 3.72e-01 | 90.2% | 79.2% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 42.0 | 3.62e-01 | 93.4% | 49.1% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 39.0 | 4.07e-01 | 98.4% | 94.4% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3306338 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.74 | 55.0 | 3.58e-01 | 80.3% | 20.4% |
| 341832 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.73 | 53.0 | 3.46e-01 | 78.7% | 48.5% |
| 3940867 | 632.22.1.67 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF842 | 0.73 | 57.0 | 4.97e-01 | 86.9% | 86.3% |
| 3609431 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.72 | 59.0 | 4.13e-01 | 88.5% | 85.0% |
| 3527261 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.71 | 57.0 | 3.57e-01 | 85.2% | 20.3% |
| 3202970 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.71 | 56.0 | 4.01e-01 | 85.2% | 33.5% |
| 3701315 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.70 | 55.0 | 3.49e-01 | 85.2% | 74.0% |
| 3712560 | 148.1.3.16 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dynein_AAA_lid | 0.70 | 52.0 | 3.81e-01 | 80.3% | 32.1% |
| 3768580 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.70 | 50.0 | 4.23e-01 | 75.4% | 47.0% |
| 3204638 | 3567.1.1.104 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › EMP70 | 0.69 | 54.0 | 3.94e-01 | 85.2% | 34.5% |
| 3687402 | 192.15.1.81 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › EMP70 | 0.68 | 54.0 | 3.88e-01 | 85.2% | 33.5% |
| 3308343 | 1008.1.1.27 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › COPIIcoated_ERV | 0.67 | 51.0 | 4.79e-01 | 82.0% | 89.3% |
| 3324709 | 1145.1.1.0 ↗ | few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 | 0.66 | 46.0 | 4.33e-01 | 73.8% | 60.0% |
| 3495550 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 48.0 | 4.03e-01 | 80.3% | 51.4% |
| 3229717 | 3470.1.1.29 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › COPIIcoated_ERV | 0.64 | 49.0 | 4.73e-01 | 83.6% | 87.1% |
| 3952598 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.64 | 47.0 | 4.07e-01 | 75.4% | 52.2% |
| 3588113 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.63 | 44.0 | 4.41e-01 | 75.4% | 93.8% |
| 3412831 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.63 | 51.0 | 3.90e-01 | 91.8% | 69.3% |
| 5077926 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.63 | 44.0 | 3.47e-01 | 75.4% | 36.3% |
| 3194667 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.63 | 49.0 | 3.24e-01 | 85.2% | 36.1% |
| 3939730 | 109.4.1.307 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2 | 0.62 | 57.0 | 3.37e-01 | 100.0% | 18.4% |
| 3879363 | 621.1.1.2 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 | 0.62 | 48.0 | 4.59e-01 | 100.0% | 70.7% |
| 3696458 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.61 | 52.0 | 2.97e-01 | 95.1% | 29.1% |
| 5030243 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.61 | 41.0 | 4.19e-01 | 72.1% | 71.7% |
| 3175064 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.61 | 50.0 | 3.34e-01 | 93.4% | 60.8% |
| 4456704 | 2498.1.1.10 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 | 0.60 | 49.0 | 3.26e-01 | 96.7% | 34.6% |
| 3957435 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.60 | 45.0 | 3.65e-01 | 80.3% | 43.3% |
| 3663989 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.60 | 48.0 | 3.81e-01 | 91.8% | 64.4% |
| 3331533 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.59 | 42.0 | 3.25e-01 | 75.4% | 34.3% |
| 4359328 | 142.1.1.44 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › GerPC | 0.59 | 42.0 | 3.72e-01 | 80.3% | 54.0% |
| 3744509 | 192.15.1.166 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › ATG2_CAD | 0.58 | 44.0 | 3.49e-01 | 86.9% | 69.7% |
| 3394141 | 601.6.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › TMV-like viral coat proteins › TMV-like viral coat proteins › TMV_coat | 0.58 | 47.0 | 3.64e-01 | 93.4% | 89.9% |
| 4169218 | 192.3.1.0 ↗ | alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0.58 | 42.0 | 3.82e-01 | 77.0% | 89.4% |
| 5043760 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.58 | 48.0 | 3.26e-01 | 95.1% | 31.2% |
| 3834416 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.58 | 45.0 | 3.31e-01 | 86.9% | 30.3% |
| 3623760 | 604.1.1.3 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › MAP65_ASE1 | 0.58 | 44.0 | 3.67e-01 | 85.2% | 67.8% |
| 3434383 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 45.0 | 3.77e-01 | 85.2% | 96.2% |
| 3593206 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.57 | 44.0 | 3.92e-01 | 83.6% | 64.4% |
| 5019968 | 3352.1.1.49 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DUF2206 | 0.57 | 43.0 | 2.61e-01 | 85.2% | 77.1% |
| 3846245 | 621.1.1.2 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 | 0.56 | 42.0 | 3.57e-01 | 83.6% | 53.0% |
| 4176828 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 41.0 | 3.94e-01 | 77.0% | 70.0% |
| 3167160 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 2.67e-01 | 91.8% | 13.5% |
| 3509641 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.56 | 41.0 | 2.80e-01 | 85.2% | 24.1% |
| 4264204 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.56 | 39.0 | 2.62e-01 | 75.4% | 69.1% |
| 3233696 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.53 | 38.0 | 3.85e-01 | 75.4% | 76.7% |
| 5050456 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 44.0 | 2.84e-01 | 95.1% | 63.0% |
| 3415514 | 132.1.1.2 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › Ribosomal_L50 | 0.52 | 44.0 | 3.76e-01 | 98.4% | 68.0% |
| 4987757 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.51 | 37.0 | 3.15e-01 | 77.0% | 66.3% |