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ON758385.1__USV40995.1__X__00169

Bact-Vir

ON758385.1__USV40995.1__X__00169

Identity

Accession:
ON758385 ↗
Kingdom:
phage

Quality

71.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-85
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.76 61.0 5.49e-01 88.0% 69.8%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 57.0 5.56e-01 88.0% 79.3%
5d3xB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 57.0 4.71e-01 88.0% 59.6%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.69 57.0 4.80e-01 89.2% 70.6%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 55.0 4.84e-01 90.4% 82.5%
4d6wA03 2.30.29.130 Mainly Beta › Roll › PH-domain like › 0.67 53.0 5.08e-01 89.2% 74.7%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 52.0 4.43e-01 86.7% 61.9%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.64 52.0 4.08e-01 88.0% 52.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 38.0 4.20e-01 85.5% 75.4%
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 51.0 4.99e-01 95.2% 81.3%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.62 50.0 4.05e-01 88.0% 59.0%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.62 53.0 4.16e-01 97.6% 84.3%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 48.0 4.49e-01 86.7% 80.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 40.0 4.50e-01 100.0% 90.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 40.0 4.51e-01 96.4% 93.2%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 38.0 4.07e-01 98.8% 75.0%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.61 52.0 4.15e-01 97.6% 91.5%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 52.0 4.28e-01 97.6% 73.5%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.60 47.0 4.10e-01 85.5% 80.3%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.59 51.0 5.08e-01 98.8% 98.9%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 4.09e-01 100.0% 71.4%
3bbjA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.58 43.0 3.02e-01 78.3% 93.6%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.58 38.0 4.40e-01 84.3% 96.6%
1qftB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 51.0 4.06e-01 98.8% 75.1%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.57 39.0 4.35e-01 88.0% 92.1%
2bonA02 2.60.200.40 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.57 43.0 3.68e-01 84.3% 94.6%
2vrsA03 2.60.90.40 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.56 43.0 3.74e-01 83.1% 85.6%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 36.0 4.09e-01 85.5% 88.7%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.56 48.0 3.78e-01 98.8% 79.1%
2xu7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.97e-01 89.2% 37.8%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 3.83e-01 92.8% 61.1%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 47.0 3.79e-01 98.8% 91.5%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.23e-01 100.0% 90.3%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 48.0 3.82e-01 100.0% 63.9%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.55 48.0 4.35e-01 100.0% 71.2%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 47.0 3.71e-01 100.0% 84.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 3.81e-01 71.1% 84.2%
1n08A00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.54 49.0 3.97e-01 100.0% 59.7%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.99e-01 98.8% 95.6%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 4.07e-01 98.8% 85.7%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.91e-01 100.0% 66.7%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 43.0 3.92e-01 91.6% 74.6%
5muaB01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 39.0 3.43e-01 83.1% 88.3%
4gzvA00 2.40.128.490 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 0.52 45.0 3.87e-01 98.8% 87.1%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 39.0 2.60e-01 81.9% 37.2%
1kkeA02 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.51 39.0 3.35e-01 84.3% 83.7%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 4.06e-01 98.8% 92.5%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 42.0 2.85e-01 96.4% 99.7%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 40.0 3.99e-01 90.4% 84.4%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 44.0 3.61e-01 100.0% 80.9%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3720183 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.73 60.0 4.63e-01 89.2% 73.9%
4332725 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.73 60.0 5.14e-01 89.2% 73.1%
4426297 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.71 49.0 4.18e-01 100.0% 45.4%
185116 295.1.1.2 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.69 57.0 4.79e-01 89.2% 70.1%
3471318 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 56.0 5.34e-01 90.4% 80.0%
3597224 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 61.0 5.31e-01 97.6% 78.4%
4938400 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.68 59.0 5.30e-01 95.2% 83.5%
3211867 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 5.00e-01 90.4% 69.1%
3398585 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 51.0 4.42e-01 85.5% 71.5%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 40.0 4.64e-01 84.3% 89.7%
3490456 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 49.0 4.15e-01 86.7% 59.3%
5071741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 37.0 4.17e-01 84.3% 80.0%
3519971 220.1.1.32 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.62 49.0 3.90e-01 86.7% 55.4%
4472606 1.1.13.55 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 0.62 43.0 4.10e-01 73.5% 92.0%
3936885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.68e-01 100.0% 93.8%
5075340 211.1.1.7 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 0.59 47.0 3.96e-01 85.5% 75.7%
3978997 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.59 43.0 4.12e-01 100.0% 67.4%
3283546 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.58 45.0 3.71e-01 81.9% 82.5%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 38.0 4.32e-01 100.0% 95.0%
4958640 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.57 48.0 3.92e-01 100.0% 94.3%
4110683 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.56 48.0 3.81e-01 98.8% 95.7%
4311063 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.55 47.0 3.75e-01 97.6% 87.2%
3726880 4252.1.1.12 beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 0.55 44.0 3.90e-01 88.0% 91.2%
4117582 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.55 50.0 4.36e-01 100.0% 68.0%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.55 39.0 4.09e-01 100.0% 84.0%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 35.0 3.72e-01 96.4% 75.7%
3459220 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.54 42.0 2.83e-01 83.1% 50.8%
3956293 1.1.5.75 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF4873 0.54 45.0 4.28e-01 91.6% 93.0%
4583479 71.1.1.3 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.54 45.0 3.67e-01 97.6% 82.7%
3924851 319.2.1.1 beta sandwiches › HSP20-like › Pre-mRNA-splicing factor PRP11 C-terminal domain › Pre-mRNA-splicing factor PRP11 C-terminal domain › SF3A2 0.53 39.0 3.39e-01 77.1% 58.5%
2516764 71.1.1.4 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › MucB_RseB 0.53 46.0 3.64e-01 100.0% 80.4%
3990703 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 46.0 3.76e-01 100.0% 70.3%
4330226 4252.1.1.13 beta barrels › AttH-like › AttH-like › AttH-like › PF27123 0.53 42.0 3.91e-01 90.4% 90.0%
5073222 1.1.8.9 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III 0.53 44.0 4.17e-01 91.6% 90.0%
3952686 4252.1.1.1 beta barrels › AttH-like › AttH-like › AttH-like › CrtC 0.51 43.0 3.74e-01 94.0% 82.3%
3526427 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.51 44.0 2.98e-01 100.0% 57.8%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.51 43.0 3.51e-01 98.8% 86.9%
3280641 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.51 42.0 4.04e-01 95.2% 96.0%
5022396 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.50 40.0 4.09e-01 88.0% 92.5%