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ON758385.1__USV41009.1__X__00183
Bact-VirON758385.1__USV41009.1__X__00183
Identity
- Accession:
- ON758385 ↗
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-95
Domain cluster:
rep: MW980064.1__QXV74086.1__X__00115__D25-86
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16225.11 best | DUF4884 | 57.2 | 1.60e-15 | 95.3% | 91.7% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 51.0 | 4.56e-01 | 73.4% | 51.1% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.73 | 52.0 | 3.21e-01 | 76.6% | 33.2% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.69 | 50.0 | 4.90e-01 | 76.6% | 93.0% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.69 | 51.0 | 5.46e-01 | 78.1% | 96.3% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.66 | 59.0 | 4.04e-01 | 100.0% | 80.1% |
| 4e2oA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 46.0 | 4.14e-01 | 71.9% | 97.7% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 55.0 | 4.35e-01 | 100.0% | 45.2% |
| 3rlfF03 | 2.40.430.10 | Mainly Beta › Beta Barrel › Periplasmic binding protein-like II › D-maltodextrin-binding protein, MBP | 0.65 | 45.0 | 4.02e-01 | 75.0% | 52.3% |
| 1yr2A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.65 | 53.0 | 3.43e-01 | 93.8% | 36.3% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 54.0 | 4.31e-01 | 100.0% | 45.8% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 54.0 | 4.17e-01 | 96.9% | 42.1% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 44.0 | 4.08e-01 | 73.4% | 69.1% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.63 | 49.0 | 4.10e-01 | 87.5% | 99.2% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 51.0 | 3.34e-01 | 90.6% | 43.7% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.62 | 50.0 | 4.34e-01 | 100.0% | 57.0% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.61 | 47.0 | 4.52e-01 | 81.2% | 73.2% |
| 2aaaA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 47.0 | 4.01e-01 | 85.9% | 93.1% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.59 | 51.0 | 4.38e-01 | 100.0% | 77.4% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.59 | 50.0 | 4.12e-01 | 100.0% | 64.8% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.59 | 52.0 | 4.77e-01 | 100.0% | 88.0% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.57 | 49.0 | 3.28e-01 | 100.0% | 80.9% |
| 1gjwA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 39.0 | 3.83e-01 | 73.4% | 98.5% |
| 3m07A04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 40.0 | 3.95e-01 | 87.5% | 71.4% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.55 | 47.0 | 4.09e-01 | 100.0% | 61.0% |
| 2jkdB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 43.0 | 3.36e-01 | 87.5% | 82.9% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.54e-01 | 85.9% | 50.9% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 47.0 | 4.03e-01 | 100.0% | 66.3% |
| 7vt9A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 41.0 | 3.91e-01 | 84.4% | 94.5% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 42.0 | 3.42e-01 | 95.3% | 77.0% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228997 | 2484.1.1.162 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box | 0.74 | 54.0 | 4.13e-01 | 90.6% | 34.5% |
| 3701925 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.68 | 61.0 | 4.94e-01 | 100.0% | 64.2% |
| 3282694 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.68 | 47.0 | 4.20e-01 | 73.4% | 96.8% |
| 3578398 | 4099.1.1.29 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 | 0.68 | 60.0 | 4.45e-01 | 100.0% | 64.7% |
| 3999576 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.68 | 60.0 | 4.63e-01 | 100.0% | 73.1% |
| 5082246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 44.0 | 4.58e-01 | 78.1% | 73.3% |
| 3567966 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.66 | 50.0 | 4.46e-01 | 84.4% | 57.9% |
| 3417283 | 7516.1.1.16 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_43 | 0.65 | 49.0 | 3.23e-01 | 82.8% | 19.3% |
| 3972685 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.65 | 56.0 | 4.28e-01 | 98.4% | 41.3% |
| 2538670 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 47.0 | 5.06e-01 | 89.1% | 98.1% |
| 5018124 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.63 | 54.0 | 4.94e-01 | 100.0% | 72.9% |
| 4067329 | 321.1.1.4 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GatB_N | 0.61 | 52.0 | 3.38e-01 | 96.9% | 50.8% |
| 5051984 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 48.0 | 4.00e-01 | 100.0% | 47.5% |
| 3603731 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 48.0 | 3.73e-01 | 85.9% | 80.0% |
| 4889522 | 3321.1.1.2 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › DNA_pol_B_N | 0.60 | 52.0 | 4.35e-01 | 100.0% | 55.4% |
| 4877157 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.60 | 51.0 | 3.34e-01 | 100.0% | 20.6% |
| 4433289 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.59 | 48.0 | 3.41e-01 | 96.9% | 72.3% |
| 4216985 | 331.19.1.2 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N | 0.59 | 50.0 | 4.61e-01 | 96.9% | 76.5% |
| 2581425 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.58 | 44.0 | 4.63e-01 | 90.6% | 96.4% |
| 3222830 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.58 | 44.0 | 3.05e-01 | 85.9% | 23.6% |
| 3492352 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 51.0 | 4.32e-01 | 100.0% | 60.0% |
| 3232904 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.57 | 43.0 | 3.04e-01 | 87.5% | 24.0% |
| 3252765 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.57 | 47.0 | 3.79e-01 | 95.3% | 45.2% |
| 4966098 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.52 | 42.0 | 4.06e-01 | 90.6% | 94.7% |
| 4934744 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.51 | 43.0 | 2.72e-01 | 93.8% | 41.1% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 41.0 | 3.73e-01 | 95.3% | 64.2% |
| 4948950 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 41.0 | 3.70e-01 | 98.4% | 73.7% |