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ON758385.1__USV41029.1__X__00203

Bact-Vir

ON758385.1__USV41029.1__X__00203

Identity

Accession:
ON758385 ↗
Kingdom:
phage

Quality

56.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 95-170
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q48A00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.64 43.0 3.66e-01 71.1% 73.9%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 4.15e-01 100.0% 49.1%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.60 50.0 4.63e-01 98.7% 74.5%
4a4aA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 4.37e-01 100.0% 57.8%
2c9aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 52.0 4.85e-01 100.0% 78.4%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.30e-01 98.7% 89.9%
2di7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 50.0 4.54e-01 96.1% 76.6%
5nldB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.26e-01 100.0% 90.6%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.59 46.0 4.17e-01 86.8% 87.3%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 50.0 4.23e-01 100.0% 75.4%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 50.0 4.19e-01 100.0% 52.4%
1rhfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.82e-01 100.0% 84.6%
4npjB02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 49.0 4.12e-01 100.0% 73.2%
7a4aA01 2.60.40.3770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 48.0 4.71e-01 100.0% 88.0%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 45.0 4.25e-01 86.8% 88.0%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 3.53e-01 90.8% 80.7%
5gm0A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 4.01e-01 98.7% 92.3%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.56 41.0 4.07e-01 82.9% 92.9%
3sy6A01 2.60.40.2620 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like 0.56 46.0 4.01e-01 100.0% 87.3%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 46.0 4.00e-01 100.0% 56.7%
4ogcA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 41.0 3.16e-01 81.6% 96.4%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 42.0 2.69e-01 84.2% 15.6%
3l5hA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 4.14e-01 89.5% 80.8%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 4.42e-01 100.0% 83.3%
2wanA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.36e-01 100.0% 85.3%
2jz4A01 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.54 36.0 3.00e-01 71.1% 34.5%
3df7A02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 41.0 3.44e-01 82.9% 72.3%
2wy3B00 2.60.40.1990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 3.85e-01 100.0% 73.0%
3ciaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.53 44.0 3.44e-01 97.4% 53.3%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 3.44e-01 90.8% 54.7%
2dm2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.07e-01 100.0% 71.8%
2erfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.31e-01 98.7% 66.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 39.0 3.93e-01 84.2% 93.7%
6nu8A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 41.0 3.43e-01 90.8% 81.1%
7chiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 40.0 2.99e-01 90.8% 31.0%
5a3lA00 2.60.120.1560 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.18e-01 94.7% 77.5%
1rz1A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 38.0 3.15e-01 82.9% 68.4%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 3.46e-01 84.2% 97.3%
3mdqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 36.0 3.26e-01 78.9% 74.8%
3cqyB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 38.0 3.09e-01 88.2% 63.6%
3zugB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.50 37.0 3.15e-01 82.9% 59.2%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 41.0 3.92e-01 97.4% 87.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943023 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 56.0 4.80e-01 100.0% 56.9%
4938291 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.64 55.0 4.72e-01 100.0% 71.5%
3605972 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 54.0 4.91e-01 100.0% 70.0%
4258556 11.1.1.66 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.63 55.0 5.05e-01 100.0% 77.0%
3909696 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.62 54.0 4.76e-01 100.0% 82.6%
3949034 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 5.00e-01 100.0% 88.4%
3815898 76.1.1.2 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.60 39.0 3.31e-01 71.1% 37.8%
3258411 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 50.0 4.49e-01 100.0% 65.2%
5084067 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 46.0 4.41e-01 100.0% 73.7%
3485288 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 49.0 3.78e-01 100.0% 73.0%
3252755 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 50.0 4.27e-01 100.0% 60.0%
3842233 1.1.7.69 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.57 43.0 4.13e-01 84.2% 85.6%
3241390 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.57 44.0 3.60e-01 89.5% 56.9%
3258806 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 43.0 4.01e-01 85.5% 87.0%
3578304 11.1.1.297 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 0.56 47.0 4.00e-01 100.0% 82.1%
3928362 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.56 47.0 4.44e-01 100.0% 90.8%
3967745 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 43.0 4.41e-01 86.8% 93.3%
3939997 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.56 48.0 4.58e-01 100.0% 91.1%
4319764 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.56 44.0 3.94e-01 88.2% 62.7%
3227073 11.1.1.835 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Irg-7 0.56 47.0 4.12e-01 100.0% 67.2%
1178919 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 46.0 4.01e-01 100.0% 87.3%
3623045 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.56 46.0 3.37e-01 94.7% 54.8%
3950185 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.56 47.0 4.52e-01 100.0% 83.3%
4956009 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 4.34e-01 100.0% 83.5%
4954736 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 4.21e-01 86.8% 96.5%
3275875 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 46.0 4.22e-01 100.0% 71.4%
3857385 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.55 46.0 3.57e-01 100.0% 64.1%
3924185 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.32e-01 100.0% 77.0%
3726432 1.1.8.11 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C 0.55 46.0 4.35e-01 98.7% 100.0%
4296283 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 46.0 4.51e-01 100.0% 96.5%
4332590 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 46.0 4.47e-01 100.0% 92.9%
3406610 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 4.22e-01 100.0% 77.9%
4497776 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 45.0 4.51e-01 98.7% 100.0%
3796900 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 45.0 4.02e-01 100.0% 64.7%
4301091 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 45.0 4.37e-01 100.0% 92.2%
4514238 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 45.0 4.49e-01 97.4% 100.0%
3963908 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.54 39.0 4.08e-01 100.0% 88.6%
4422834 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.54 45.0 4.55e-01 97.4% 100.0%
2898190 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.53 44.0 3.72e-01 100.0% 63.6%
4152684 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 45.0 4.48e-01 98.7% 100.0%
4956335 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 42.0 4.11e-01 98.7% 81.2%
5043373 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.53 36.0 3.12e-01 71.1% 44.2%
4398429 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 45.0 4.47e-01 98.7% 100.0%
4270212 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 45.0 4.37e-01 100.0% 89.9%
3510907 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 45.0 4.37e-01 100.0% 94.3%
3744357 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 45.0 4.38e-01 100.0% 100.0%
4614883 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 44.0 4.43e-01 100.0% 98.8%
4200507 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 44.0 4.38e-01 97.4% 98.8%
3581744 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 43.0 4.06e-01 100.0% 74.0%
4944011 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.52 35.0 3.43e-01 71.1% 100.0%
3895929 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.52 43.0 4.04e-01 100.0% 75.0%
3995219 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.57e-01 97.4% 82.7%
3927098 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 43.0 3.95e-01 100.0% 70.0%
4932659 244.1.1.16 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GGR_cat 0.51 42.0 3.65e-01 100.0% 59.3%
3390155 1.1.8.5 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.50 41.0 4.08e-01 98.7% 100.0%
4218926 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.50 39.0 3.43e-01 86.8% 95.8%
4890601 1.1.7.93 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D3, GTP_EFTU_D2 0.50 37.0 3.47e-01 81.6% 70.7%
D2 medium residues 10-75
PDB