Back to structures

ON758385.1__USV41049.1__X__00223

Bact-Vir

ON758385.1__USV41049.1__X__00223

Identity

Accession:
ON758385 ↗
Kingdom:
phage

Quality

92.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-72
PDB
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.61 47.0 3.93e-01 85.2% 96.4%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 38.0 3.74e-01 77.0% 59.1%
3w1zC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 41.0 3.27e-01 75.4% 55.4%
3k7uC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 43.0 3.82e-01 86.9% 85.7%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.57 43.0 3.93e-01 83.6% 65.1%
1x6cA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 46.0 3.88e-01 98.4% 73.7%
1luiA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 46.0 3.95e-01 98.4% 75.0%
7k98B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 3.64e-01 90.2% 81.6%
2aujD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 40.0 4.00e-01 78.7% 85.5%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 39.0 3.10e-01 78.7% 36.1%
3f62A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.64e-01 90.2% 89.8%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 46.0 3.01e-01 100.0% 60.2%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.54 41.0 3.44e-01 85.2% 55.0%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 40.0 2.83e-01 83.6% 37.9%
2k8qA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 2.92e-01 72.1% 72.4%
4cckA03 3.90.930.40 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.53 43.0 3.26e-01 90.2% 56.8%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.74e-01 100.0% 69.1%
4feiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.51e-01 88.5% 61.8%
4egwA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.52 41.0 3.21e-01 86.9% 79.4%
2f8xC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.67e-01 91.8% 91.5%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 45.0 2.86e-01 100.0% 66.7%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 39.0 3.44e-01 85.2% 85.6%
1a1xA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.52 41.0 3.51e-01 91.8% 84.0%
3muuB02 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.52 41.0 3.91e-01 90.2% 89.0%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.51 34.0 3.15e-01 80.3% 51.2%
1kvzA00 3.10.130.10 Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain 0.51 37.0 3.19e-01 82.0% 68.2%
2gysA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 41.0 3.55e-01 93.4% 92.2%
2shpB03 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 37.0 2.45e-01 82.0% 27.3%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3848399 4.8.1.24 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.65 44.0 4.28e-01 86.9% 62.9%
4996733 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.62 46.0 4.49e-01 83.6% 71.4%
3564736 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.60 41.0 2.57e-01 70.5% 20.9%
3587629 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.33e-01 85.2% 89.2%
3386801 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 44.0 3.82e-01 86.9% 64.0%
4028630 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 39.0 3.91e-01 73.8% 73.8%
2439645 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.56 40.0 3.15e-01 75.4% 49.2%
2559738 79.1.1.9 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer 0.56 36.0 2.25e-01 80.3% 11.2%
3578264 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 39.0 3.28e-01 75.4% 58.2%
3789597 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 39.0 3.43e-01 75.4% 67.4%
3286654 223.1.1.37 a+b three layers › Profilin-like › sensor domains › sensor domains › Rv3651-like_N 0.55 35.0 2.98e-01 72.1% 39.0%
3698801 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.55 40.0 2.47e-01 78.7% 82.0%
3475901 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 39.0 3.45e-01 75.4% 72.2%
None 0.55 39.0 3.20e-01 75.4% 56.5%
3680932 220.1.1.180 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7642 0.55 43.0 3.62e-01 91.8% 84.3%
4969245 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 41.0 3.11e-01 83.6% 33.5%
4010765 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.54 46.0 3.71e-01 98.4% 86.4%
4397552 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.54 45.0 3.68e-01 98.4% 53.6%
3614247 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 3.74e-01 100.0% 80.0%
3199439 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 3.31e-01 100.0% 42.6%
3574615 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 38.0 2.96e-01 75.4% 44.3%
5081878 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 44.0 2.80e-01 98.4% 91.4%
4544592 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.53 45.0 3.49e-01 96.7% 79.3%
4989633 3891.1.1.0 a+b two layers › Archaea-specific ribosomal protein L46a › Archaea-specific ribosomal protein L46a › Archaea-specific ribosomal protein L46a 0.53 43.0 3.97e-01 100.0% 70.0%
3443786 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 40.0 3.84e-01 85.2% 84.0%
3380840 220.1.1.180 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7642 0.53 41.0 3.57e-01 93.4% 74.5%
4600693 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.53 44.0 3.60e-01 98.4% 84.0%
4438376 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.52 44.0 3.63e-01 98.4% 80.8%
4259228 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.52 43.0 3.67e-01 98.4% 87.3%
3275715 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.52 41.0 3.51e-01 88.5% 63.0%
3715657 241.10.1.0 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.51 40.0 3.48e-01 86.9% 61.6%
3238997 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 44.0 3.44e-01 96.7% 76.7%
3372466 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 44.0 4.17e-01 100.0% 96.0%
4990321 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.51 43.0 2.91e-01 95.1% 79.1%
5076410 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.50 40.0 2.58e-01 96.7% 91.1%
3239567 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 39.0 3.35e-01 88.5% 60.0%