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ON759210.1__UVD41286.1__X__00014
Bact-VirON759210.1__UVD41286.1__X__00014
Identity
- Accession:
- ON759210 ↗
- Kingdom:
- phage
Quality
77.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Rountreeviridae›
Streptococcus_phage_vB_SbRt-pBovineS21
TaxID: 2961981
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-166
D2
medium
residues 8-50
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zpjA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 65.0 | 4.28e-01 | 100.0% | 29.8% |
| 3kbgA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.71 | 57.0 | 4.65e-01 | 100.0% | 48.1% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.69 | 55.0 | 4.10e-01 | 100.0% | 48.5% |
| 2n6eA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.66 | 45.0 | 3.39e-01 | 72.1% | 55.5% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.64 | 51.0 | 3.75e-01 | 100.0% | 54.9% |
| 6frnA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.64 | 50.0 | 3.16e-01 | 93.0% | 45.3% |
| 2azpA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.63 | 50.0 | 3.56e-01 | 100.0% | 38.5% |
| 3prbA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 46.0 | 4.62e-01 | 81.4% | 90.9% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 41.0 | 3.48e-01 | 100.0% | 41.9% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.61 | 44.0 | 3.31e-01 | 86.0% | 29.6% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 45.0 | 3.82e-01 | 88.4% | 61.5% |
| 6njeA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.59 | 38.0 | 2.32e-01 | 100.0% | 9.4% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 47.0 | 2.78e-01 | 95.3% | 80.7% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.57 | 44.0 | 3.46e-01 | 97.7% | 46.6% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 42.0 | 2.65e-01 | 97.7% | 95.7% |
| 3cueC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 39.0 | 2.93e-01 | 83.7% | 34.3% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 44.0 | 2.63e-01 | 97.7% | 22.1% |
| 1afcA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 3.37e-01 | 100.0% | 52.8% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 37.0 | 2.86e-01 | 81.4% | 35.8% |
| 2jraA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.53 | 36.0 | 3.66e-01 | 74.4% | 88.1% |
| 2lojA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.53 | 38.0 | 3.85e-01 | 100.0% | 94.9% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 40.0 | 2.44e-01 | 95.3% | 20.2% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.52 | 40.0 | 3.14e-01 | 95.3% | 86.3% |
| 2arpF02 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.52 | 33.0 | 2.84e-01 | 72.1% | 31.9% |
| 1b69A00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 37.0 | 3.29e-01 | 100.0% | 52.2% |
| 5w8mA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.50 | 38.0 | 2.70e-01 | 100.0% | 49.0% |
| 5c9iD01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.50 | 38.0 | 2.72e-01 | 93.0% | 75.2% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3519228 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.79 | 57.0 | 5.45e-01 | 76.7% | 94.0% |
| 3519728 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.79 | 57.0 | 5.24e-01 | 76.7% | 65.5% |
| 3510111 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.77 | 55.0 | 5.11e-01 | 76.7% | 92.7% |
| 3630572 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.77 | 57.0 | 6.10e-01 | 90.7% | 97.1% |
| 3502372 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.77 | 55.0 | 5.68e-01 | 76.7% | 87.5% |
| 3509360 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.76 | 56.0 | 5.19e-01 | 79.1% | 63.6% |
| 3509213 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.76 | 55.0 | 4.60e-01 | 95.3% | 45.3% |
| 3214383 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.75 | 54.0 | 5.75e-01 | 88.4% | 94.3% |
| 3501515 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.75 | 52.0 | 4.46e-01 | 74.4% | 77.1% |
| 3515528 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.75 | 54.0 | 4.60e-01 | 76.7% | 77.1% |
| 3212141 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.75 | 48.0 | 4.10e-01 | 76.7% | 40.0% |
| 3520979 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.74 | 54.0 | 5.00e-01 | 79.1% | 94.5% |
| 3619861 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.74 | 54.0 | 5.57e-01 | 79.1% | 87.2% |
| 3507376 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.74 | 55.0 | 5.65e-01 | 79.1% | 87.5% |
| 3501815 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.74 | 53.0 | 4.71e-01 | 79.1% | 84.6% |
| 4512477 | 221.1.2.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif | 0.73 | 60.0 | 4.42e-01 | 100.0% | 35.5% |
| 3505002 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.71 | 51.0 | 5.44e-01 | 79.1% | 97.1% |
| 3518896 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.71 | 50.0 | 5.12e-01 | 83.7% | 82.5% |
| 3999534 | 391.1.2.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 | 0.70 | 51.0 | 5.24e-01 | 95.3% | 87.5% |
| 3945039 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.68 | 51.0 | 3.11e-01 | 88.4% | 58.8% |
| 3838862 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 54.0 | 3.85e-01 | 100.0% | 36.1% |
| 3585186 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.67 | 46.0 | 4.85e-01 | 90.7% | 94.3% |
| 3231089 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.66 | 49.0 | 5.03e-01 | 83.7% | 92.5% |
| 4120071 | 2007.1.1.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Shikimate_dh_N | 0.65 | 53.0 | 3.99e-01 | 100.0% | 89.2% |
| 4417898 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.64 | 51.0 | 3.67e-01 | 100.0% | 39.6% |
| 4013234 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 54.0 | 3.10e-01 | 100.0% | 11.5% |
| 4369844 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.64 | 50.0 | 3.61e-01 | 100.0% | 38.4% |
| 3926189 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.64 | 42.0 | 3.28e-01 | 100.0% | 30.0% |
| 4160795 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.64 | 51.0 | 3.71e-01 | 100.0% | 42.8% |
| 4630692 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.63 | 50.0 | 3.56e-01 | 100.0% | 39.4% |
| 3165957 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.62 | 50.0 | 4.35e-01 | 97.7% | 81.3% |
| 3399989 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.62 | 48.0 | 3.52e-01 | 93.0% | 71.4% |
| 4032931 | 286.1.1.5 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N | 0.62 | 49.0 | 3.75e-01 | 100.0% | 47.2% |
| 4048173 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.62 | 48.0 | 3.75e-01 | 100.0% | 50.8% |
| 4964644 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.62 | 46.0 | 4.31e-01 | 83.7% | 69.1% |
| 3877955 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.62 | 46.0 | 3.36e-01 | 90.7% | 53.1% |
| 5010420 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.61 | 50.0 | 3.90e-01 | 100.0% | 43.5% |
| 4956395 | 239.1.1.7 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH | 0.61 | 45.0 | 4.22e-01 | 83.7% | 70.9% |
| 1273610 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.61 | 48.0 | 3.51e-01 | 100.0% | 42.2% |
| 4928950 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.60 | 46.0 | 4.40e-01 | 83.7% | 82.0% |
| 3788001 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 49.0 | 2.98e-01 | 100.0% | 26.8% |
| 3510113 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.59 | 42.0 | 4.24e-01 | 90.7% | 80.0% |
| 1889033 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.58 | 50.0 | 3.09e-01 | 100.0% | 22.6% |
| 3233942 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.58 | 40.0 | 4.22e-01 | 86.0% | 97.1% |
| 3935868 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 39.0 | 4.10e-01 | 88.4% | 94.3% |
| 4186983 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.57 | 38.0 | 3.35e-01 | 72.1% | 50.7% |
| 1191474 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.57 | 41.0 | 3.61e-01 | 88.4% | 56.4% |
| 4072405 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.56 | 38.0 | 3.37e-01 | 74.4% | 52.0% |
| 4312419 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.56 | 43.0 | 2.87e-01 | 100.0% | 17.4% |
| 4941120 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 43.0 | 3.10e-01 | 100.0% | 31.2% |
| 3792873 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.53 | 39.0 | 4.00e-01 | 86.0% | 90.0% |
| 184803 | 6029.1.1.1 ↗ | beta meanders › Hemin uptake protein hemP › Hemin uptake protein hemP › Hemin uptake protein hemP › hemP | 0.53 | 38.0 | 3.54e-01 | 100.0% | 58.7% |
| 164474 | 387.1.1.8 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Omega-toxin | 0.51 | 40.0 | 4.14e-01 | 93.0% | 100.0% |
| 4222760 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.51 | 44.0 | 3.79e-01 | 100.0% | 64.3% |
| 3608058 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.51 | 38.0 | 2.82e-01 | 100.0% | 40.0% |