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ON778006.1__UVD41309.1__X__00012

Bact-Vir

ON778006.1__UVD41309.1__X__00012

Identity

Accession:
ON778006 ↗
Kingdom:
phage

Quality

90.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-268
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19040.7 best SGNH 55.0 1.40e-14 90.2% 87.9%
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4h08A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.72 53.0 5.96e-01 91.8% 96.0%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.71 36.0 4.74e-01 88.2% 85.7%
3euaF01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.70 38.0 4.75e-01 88.2% 84.0%
2bfdB02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 34.0 4.78e-01 90.6% 99.2%
3k9cB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 33.0 4.55e-01 88.6% 91.6%
4f2gA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.67 31.0 3.96e-01 87.8% 73.5%
1umdB02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 35.0 4.75e-01 91.0% 99.2%
3grfA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.65 28.0 3.71e-01 87.5% 70.3%
1itzA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 34.0 4.60e-01 91.0% 96.9%
3l84A03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 31.0 4.48e-01 91.0% 96.6%
3p94A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.65 48.0 5.34e-01 91.4% 94.6%
1duvG01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.64 30.0 3.81e-01 87.8% 72.0%
5exeA02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 34.0 4.39e-01 91.0% 88.2%
5ilnA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.64 35.0 3.91e-01 88.2% 66.3%
4e21A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 38.0 4.54e-01 88.2% 83.3%
4am8E01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.64 33.0 4.04e-01 87.8% 74.9%
3klbA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.62 39.0 4.85e-01 86.7% 98.1%
7e76B01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 37.0 4.23e-01 88.6% 76.4%
4bjhB01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.62 30.0 3.85e-01 86.7% 77.6%
3wy7A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 36.0 3.80e-01 88.6% 60.9%
3kznA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.61 32.0 3.93e-01 87.8% 77.6%
2p11A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.61 35.0 4.59e-01 88.6% 99.3%
7x0hC01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 32.0 4.33e-01 91.0% 94.9%
3sc6A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 42.0 4.63e-01 87.1% 86.8%
1js1Y01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.60 32.0 3.87e-01 87.5% 77.4%
1rliD00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.60 40.0 4.75e-01 87.1% 100.0%
1r8jB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 34.0 4.41e-01 87.8% 96.6%
1ydgA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.59 45.0 4.93e-01 88.2% 98.0%
1bgwA02 3.40.50.670 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 36.0 4.27e-01 91.8% 91.2%
2a4kB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 4.59e-01 88.2% 93.4%
1pzmA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 36.0 4.41e-01 90.2% 95.9%
1e8cB03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.56 32.0 4.24e-01 83.9% 100.0%
3hbmA01 3.40.50.11190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 32.0 4.22e-01 79.6% 100.0%
3slrA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 44.0 4.78e-01 93.3% 97.7%
4x54A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 4.64e-01 86.7% 95.8%
2ab0A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.54 38.0 4.24e-01 88.2% 90.8%
3dhnA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 42.0 4.52e-01 86.3% 93.5%
5eswB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 36.0 4.13e-01 90.2% 90.5%
4h0cA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 40.0 4.41e-01 90.6% 95.2%
4hjhB01 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.53 23.0 2.97e-01 83.9% 66.2%
4cgyA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 34.0 4.03e-01 85.9% 92.0%
4ft4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 45.0 3.96e-01 88.6% 95.3%
1zemA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 4.43e-01 87.1% 95.0%
1b6gA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 47.0 4.40e-01 95.3% 96.5%
1a8uA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 4.43e-01 91.4% 94.6%
4wpgA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 40.0 4.42e-01 87.5% 97.1%
3awdA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 4.33e-01 86.7% 91.4%
3wdsA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 43.0 4.34e-01 86.7% 93.0%
4y7dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 45.0 4.34e-01 92.2% 94.8%
5g0aA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 38.0 3.73e-01 88.2% 68.0%
3n74A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 4.38e-01 86.7% 93.4%
4jz5A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 38.0 4.13e-01 91.8% 92.2%
5ygrB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 3.88e-01 92.2% 76.7%
3ucxA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 4.32e-01 87.5% 93.4%
3r1iB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 42.0 4.33e-01 86.7% 91.1%
2xmzA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 4.38e-01 92.2% 99.2%
5icsF00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 4.30e-01 87.8% 88.7%
2wmiA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.51 42.0 3.75e-01 87.5% 90.9%
2wtmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 44.0 4.44e-01 91.8% 94.4%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963582 2007.5.1.23 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH 0.70 58.0 6.24e-01 90.2% 100.0%
3286996 2007.5.1.23 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH 0.69 65.0 6.25e-01 98.8% 90.5%
3965109 2007.5.1.23 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH 0.69 63.0 6.42e-01 96.5% 100.0%
5082638 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.69 33.0 4.49e-01 91.8% 85.9%
4975784 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.68 32.0 4.11e-01 90.2% 75.2%
4974714 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.67 32.0 4.07e-01 91.8% 74.7%
4983946 7522.1.1.6 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PF30897 0.67 33.0 4.38e-01 91.8% 86.7%
3243089 2007.5.1.23 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH 0.67 62.0 6.03e-01 99.2% 96.8%
5065743 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.66 34.0 4.21e-01 91.8% 76.2%
3278503 7522.1.1.5 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C_1 0.65 36.0 4.58e-01 91.0% 90.7%
3213943 2007.5.1.23 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SGNH 0.64 60.0 5.99e-01 99.2% 99.2%
3271977 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.64 41.0 5.03e-01 87.8% 97.1%
5018445 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.64 32.0 4.18e-01 90.2% 84.3%
3787018 7526.1.1.1 a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 0.63 27.0 3.64e-01 87.8% 72.6%
4945100 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.63 41.0 4.79e-01 87.8% 91.1%
137906 2007.2.1.5 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_4 0.62 39.0 4.85e-01 86.7% 98.1%
5083852 7576.1.1.0 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain 0.62 29.0 4.28e-01 83.5% 100.0%
3709094 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.60 41.0 4.23e-01 91.0% 71.2%
1156551 2007.5.1.15 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › FkbH_N 0.59 45.0 4.85e-01 88.2% 91.7%
3599319 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.57 41.0 4.44e-01 87.8% 86.0%
3961470 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.57 44.0 4.64e-01 91.8% 87.7%
3576255 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.57 26.0 3.67e-01 86.7% 90.4%
3802711 7579.1.1.22 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PAE 0.57 50.0 4.33e-01 95.7% 88.9%
4406660 2006.1.3.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim 0.57 41.0 4.29e-01 90.2% 79.2%
4124102 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.56 42.0 4.32e-01 89.8% 80.8%
3964707 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.56 42.0 4.39e-01 90.2% 83.9%
3741511 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.56 45.0 4.79e-01 88.6% 95.9%
None 0.55 41.0 4.31e-01 89.8% 83.0%
3501422 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.54 35.0 3.86e-01 88.6% 78.1%
5003367 2484.1.1.23 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydantoinase_A 0.54 31.0 3.97e-01 82.0% 95.3%
3193985 7512.1.1.3 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.53 35.0 3.79e-01 87.8% 76.4%
3988445 2007.1.1.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI 0.53 35.0 4.11e-01 88.2% 92.8%
3581416 2004.1.1.360 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTE_Ploop 0.53 38.0 4.41e-01 80.8% 100.0%
4570763 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.53 42.0 3.24e-01 83.1% 83.6%
3465494 2003.1.5.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.53 44.0 3.56e-01 89.0% 94.2%
4945733 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.52 40.0 4.12e-01 90.6% 81.2%
3232943 2004.1.1.360 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTE_Ploop 0.52 42.0 4.53e-01 87.8% 98.1%
5001390 2003.1.9.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.51 36.0 3.95e-01 86.7% 85.7%
1549043 2007.1.15.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › YfiR › DUF4154 0.51 31.0 3.92e-01 81.6% 100.0%
3677635 2003.1.1.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.51 39.0 3.44e-01 77.6% 98.6%
4958114 2003.1.1.48 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N 0.51 37.0 4.18e-01 85.1% 95.5%
145519 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.51 42.0 4.37e-01 87.1% 93.2%
3943510 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 43.0 4.03e-01 89.0% 99.7%
3971870 2002.1.1.32 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Oxidored_FMN 0.50 42.0 3.76e-01 88.2% 87.5%