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ON778463.1__UTQ80231.1__X__00046

Bact-Vir

ON778463.1__UTQ80231.1__X__00046

Identity

Accession:
ON778463 ↗
Kingdom:
phage

Quality

72.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-75
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.84 59.0 5.56e-01 73.3% 66.3%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 48.0 4.82e-01 74.7% 65.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 47.0 5.36e-01 76.0% 91.1%
1on2A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.68 38.0 4.17e-01 82.7% 66.7%
3g0oA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.66 47.0 4.01e-01 74.7% 88.4%
1vpdA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.66 47.0 3.95e-01 76.0% 85.5%
1ignB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 46.0 4.33e-01 73.3% 62.0%
2nt2A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.66 45.0 3.67e-01 72.0% 60.6%
2cvzA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.65 46.0 3.88e-01 76.0% 85.6%
1a5tA03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.64 44.0 3.80e-01 70.7% 52.6%
2h5nC00 1.10.3680.10 Mainly Alpha › Orthogonal Bundle › TerB-like › TerB-like 0.64 56.0 4.78e-01 100.0% 68.5%
2lbfB01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 46.0 4.79e-01 78.7% 87.0%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.19e-01 70.7% 82.9%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.99e-01 85.3% 100.0%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.62 44.0 4.06e-01 74.7% 61.6%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.48e-01 82.7% 93.4%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.62 48.0 3.88e-01 85.3% 87.7%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.21e-01 74.7% 80.0%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.17e-01 73.3% 73.8%
2mg4A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 44.0 4.62e-01 77.3% 98.5%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 51.0 5.03e-01 97.3% 89.0%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 44.0 3.61e-01 77.3% 50.7%
2gz4A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.59 44.0 3.32e-01 81.3% 64.5%
8d8lN01 1.10.287.1480 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 30.0 2.93e-01 72.0% 41.9%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.94e-01 74.7% 75.8%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 42.0 3.13e-01 81.3% 29.6%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.40e-01 84.0% 82.9%
2co9A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.54 36.0 3.30e-01 85.3% 51.0%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.54 35.0 3.94e-01 96.0% 90.9%
4au2B01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.54 45.0 3.36e-01 100.0% 80.1%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3958076 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.83 62.0 3.99e-01 77.3% 34.2%
167309 592.2.1.3 alpha arrays › PWI domain-like › YugE-like › YugE-like › Nab2 0.82 58.0 5.13e-01 73.3% 52.4%
4438504 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.80 62.0 6.60e-01 82.7% 93.8%
3239718 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 55.0 5.92e-01 77.3% 84.6%
4133453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 6.21e-01 80.0% 100.0%
4934782 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.77 54.0 3.78e-01 72.0% 24.5%
3829115 101.1.1.270 alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 0.76 52.0 5.54e-01 72.0% 81.5%
3277954 2008.1.1.67 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C 0.76 56.0 3.65e-01 78.7% 29.8%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 53.0 5.50e-01 72.0% 91.4%
3657981 198.1.1.16 alpha arrays › Saposin-like › Saposin-like › Saposin-like › HTH_70 0.76 55.0 5.40e-01 76.0% 91.3%
4942265 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 60.0 5.77e-01 85.3% 100.0%
1566530 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.76 56.0 5.51e-01 78.7% 81.5%
5045965 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.75 58.0 5.26e-01 82.7% 69.0%
5017220 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 51.0 5.49e-01 70.7% 87.7%
3248091 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.75 56.0 5.36e-01 78.7% 81.2%
5019592 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.75 53.0 3.66e-01 73.3% 27.8%
3672635 101.1.1.295 alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.74 57.0 5.71e-01 82.7% 86.7%
3411866 3919.1.1.0 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.73 54.0 4.57e-01 78.7% 48.0%
3992048 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 49.0 5.51e-01 70.7% 94.5%
3886268 3919.1.1.0 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.73 51.0 4.48e-01 73.3% 50.9%
3262552 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.72 53.0 5.39e-01 78.7% 85.3%
5078179 173.1.1.0 alpha arrays › Uteroglobin-like › Uteroglobin-like › Uteroglobin-like 0.72 55.0 5.51e-01 84.0% 100.0%
4998572 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 53.0 5.09e-01 78.7% 71.8%
5056777 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 4.81e-01 70.7% 67.5%
4029637 314.1.1.9 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.72 55.0 3.52e-01 82.7% 30.1%
3234027 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.72 50.0 5.45e-01 77.3% 91.7%
3724068 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 47.0 5.41e-01 72.0% 92.7%
3723123 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 54.0 5.95e-01 88.0% 100.0%
4935112 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.71 58.0 4.94e-01 89.3% 71.7%
3777242 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.70 51.0 4.39e-01 77.3% 49.2%
3584520 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 4.85e-01 84.0% 77.3%
5008229 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 5.64e-01 90.7% 100.0%
5022856 7014.1.1.1 alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.69 50.0 4.22e-01 76.0% 69.4%
3890108 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.69 48.0 4.26e-01 73.3% 51.8%
4506746 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.69 48.0 3.54e-01 72.0% 62.1%
3236431 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 48.0 4.96e-01 73.3% 80.0%
4019040 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.68 47.0 3.62e-01 72.0% 44.1%
4942943 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.68 54.0 4.74e-01 85.3% 80.0%
4271175 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.67 48.0 4.01e-01 76.0% 80.0%
4464384 198.2.1.1 alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId 0.66 49.0 5.05e-01 80.0% 97.1%
3740124 101.1.17.19 alpha arrays › HTH › HTH › FF domain › DEK_C 0.66 45.0 4.99e-01 70.7% 100.0%
4978129 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 49.0 3.09e-01 80.0% 32.0%
3579249 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 45.0 4.40e-01 73.3% 81.2%
5025549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 45.0 4.75e-01 73.3% 95.4%
3963583 2008.1.1.67 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C 0.65 49.0 3.26e-01 81.3% 88.5%
1721534 592.1.1.2 alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.65 47.0 4.08e-01 77.3% 58.0%
4990214 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.64 50.0 3.77e-01 85.3% 42.6%
3262738 592.1.1.2 alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.63 46.0 3.93e-01 77.3% 52.0%
4989829 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.63 50.0 5.02e-01 86.7% 98.7%
3684538 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.63 51.0 3.99e-01 88.0% 70.0%
4397698 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.62 43.0 3.80e-01 74.7% 76.7%
3926197 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 52.0 4.74e-01 100.0% 82.7%
3337658 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.61 43.0 3.25e-01 73.3% 31.4%
5048289 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.60 42.0 3.26e-01 74.7% 30.5%
4236554 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.59 40.0 4.32e-01 72.0% 86.7%
3264680 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 51.0 5.06e-01 100.0% 95.0%
3387249 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.56 47.0 3.63e-01 100.0% 96.9%
4951565 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.55 49.0 3.71e-01 100.0% 93.3%
5045542 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.55 48.0 3.55e-01 100.0% 37.0%
4031879 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.55 47.0 3.48e-01 97.3% 38.5%