←Back to structures

ON782130.1UTC25933.1X__00024

Bact-Vir

ON782130.1__UTC25933.1__X__00024

Identity

Accession:: ON782130 ↗
Kingdom:: phage

Quality

95.1 mean pLDDT

Taxonomy

Salmonella_phage_vB_Sal_PHB48

TaxID: 2961709

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-68

PDB

Domain cluster: rep: MW735835.1__QTH80463.1__PA10_00265__00263__D2-53

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4r7eA00	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.63	35.0	3.46e-01	95.3%	49.3%
2lxhC00	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.61	33.0	3.46e-01	95.3%	55.2%
5trbA00	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.58	34.0	3.32e-01	95.3%	50.7%
3ng2B00	3.30.40.10	Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger)	0.56	33.0	3.29e-01	100.0%	55.2%
4dloB01	4.10.1240.10	Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain	0.55	37.0	3.72e-01	70.3%	92.4%
3uoxB01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.54	45.0	3.00e-01	98.4%	95.3%
2gjwC01	3.40.1350.150	Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 ›	0.52	43.0	3.38e-01	93.8%	61.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3814844	376.1.1.21 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2	0.57	34.0	3.56e-01	95.3%	63.3%
4344487	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.56	37.0	2.79e-01	70.3%	26.7%
3805637	376.1.1.61 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2	0.56	32.0	2.97e-01	95.3%	42.5%
3500342	376.1.1.20 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX	0.56	39.0	3.57e-01	75.0%	63.3%
3244384	376.1.1.151 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2, PF30896	0.56	33.0	2.69e-01	95.3%	27.4%
3503755	376.1.1.0 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box	0.55	36.0	3.75e-01	93.8%	72.9%
3735991	109.4.1.526 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc	0.55	37.0	2.14e-01	70.3%	41.6%
4645846	375.1.1.179 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha	0.55	38.0	2.82e-01	75.0%	27.6%
3770354	376.1.1.1 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4	0.54	40.0	3.62e-01	95.3%	58.8%
3486569	267.1.1.3 ↗	a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase	0.53	43.0	2.88e-01	90.6%	36.2%
3297654	64.1.1.18 ↗	beta meanders › WW domain-like › WW domain › WW domain › GUB_WAK_bind	0.52	42.0	3.56e-01	95.3%	80.8%
1247294	375.1.1.18 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2	0.52	32.0	3.57e-01	93.8%	85.4%
3174948	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.50	35.0	3.85e-01	95.3%	92.0%

D2 high residues 73-124

PDB

Domain cluster: rep: MZ188976.1__QVJ82358.1__JK004_1__00001__D61-115

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02413.23 best	Caudo_TAP	42.6	9.10e-11	100.0%	38.9%